RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 GAS2L2Q8NHY3 880 aa25.69■■□□□ 1.7
SRSF4-206ENST00000605204 ITGB4P16144 1822 aa25.69■■□□□ 1.7
SRSF4-206ENST00000605204 CABP4P57796 275 aa25.69■■□□□ 1.7
SRSF4-206ENST00000605204 ZNF784Q8NCA9 323 aaPredicted RBP25.68■■□□□ 1.7
SRSF4-206ENST00000605204 TAF1LQ8IZX4 1826 aa25.67■■□□□ 1.7
SRSF4-206ENST00000605204 U2AF1L5P0DN76 240 aaPredicted RBP25.67■■□□□ 1.7
SRSF4-206ENST00000605204 U2AF1Q01081 240 aaKnown RBP eCLIP25.67■■□□□ 1.75e-9■■□□□ 13.5
SRSF4-206ENST00000605204 MTHFSDQ2M296 383 aaKnown RBP25.67■■□□□ 1.7
SRSF4-206ENST00000605204 FCHSD2O94868 740 aa25.66■■□□□ 1.7
SRSF4-206ENST00000605204 LOC102724428A0A0B4J2F2 783 aa25.65■■□□□ 1.7
SRSF4-206ENST00000605204 SIK1P57059 783 aa25.65■■□□□ 1.7
SRSF4-206ENST00000605204 RSPH6AQ9H0K4 717 aa25.65■■□□□ 1.7
SRSF4-206ENST00000605204 ATG3Q9NT62 314 aa25.64■■□□□ 1.69
SRSF4-206ENST00000605204 TFCP2L1Q9NZI6 479 aa25.64■■□□□ 1.69
SRSF4-206ENST00000605204 ASAP1Q9ULH1 1129 aa25.64■■□□□ 1.69
SRSF4-206ENST00000605204 MRC1P22897 1456 aa25.63■■□□□ 1.69
SRSF4-206ENST00000605204 PRKAR2BP31323 418 aa25.63■■□□□ 1.69
SRSF4-206ENST00000605204 MYBBP1AQ9BQG0 1328 aaKnown RBP25.63■■□□□ 1.69
SRSF4-206ENST00000605204 SLC16A10Q8TF71 515 aa25.62■■□□□ 1.69
SRSF4-206ENST00000605204 KLHL34Q8N239 644 aa25.61■■□□□ 1.69
SRSF4-206ENST00000605204 SLC52A2Q9HAB3 445 aa25.61■■□□□ 1.69
SRSF4-206ENST00000605204 NEFMP07197 916 aa25.6■■□□□ 1.69
SRSF4-206ENST00000605204 FLAD1Q8NFF5 587 aa25.6■■□□□ 1.69
SRSF4-206ENST00000605204 ADAMTS7Q9UKP4 1686 aa25.59■■□□□ 1.69
SRSF4-206ENST00000605204 GNAT3A8MTJ3 354 aa25.59■■□□□ 1.69
SRSF4-206ENST00000605204 RNMTO43148 476 aaKnown RBP25.59■■□□□ 1.69
SRSF4-206ENST00000605204 NFATC2IPQ8NCF5 419 aa25.59■■□□□ 1.69
SRSF4-206ENST00000605204 PNNQ9H307 717 aaKnown RBP25.59■■□□□ 1.69
SRSF4-206ENST00000605204 SCN11AQ9UI33 1791 aa25.58■■□□□ 1.69
SRSF4-206ENST00000605204 NLGN2Q8NFZ4 835 aa25.58■■□□□ 1.69
SRSF4-206ENST00000605204 ZNF831Q5JPB2 1677 aa25.58■■□□□ 1.69
SRSF4-206ENST00000605204 ATP6V1AP38606 617 aa25.57■■□□□ 1.68
SRSF4-206ENST00000605204 AK7Q96M32 723 aa25.57■■□□□ 1.68
SRSF4-206ENST00000605204 C4BP0C0L5 1744 aa25.57■■□□□ 1.68
SRSF4-206ENST00000605204 ZNF316A6NFI3 1004 aaPredicted RBP25.56■■□□□ 1.68
SRSF4-206ENST00000605204 UBR3Q6ZT12 1888 aa25.55■■□□□ 1.68
SRSF4-206ENST00000605204 POLD1P28340 1107 aa25.55■■□□□ 1.68
SRSF4-206ENST00000605204 LGR6Q9HBX8 967 aa25.55■■□□□ 1.68
SRSF4-206ENST00000605204 PHACTR3Q96KR7 559 aa25.54■■□□□ 1.68
SRSF4-206ENST00000605204 TEFQ10587 303 aa25.53■■□□□ 1.68
SRSF4-206ENST00000605204 COL23A1Q86Y22 540 aaPredicted RBP25.53■■□□□ 1.68
SRSF4-206ENST00000605204 RBM42Q9BTD8 480 aaKnown RBP25.53■■□□□ 1.68
SRSF4-206ENST00000605204 PRKRIP1Q9H875 184 aaPredicted RBP25.53■■□□□ 1.68
SRSF4-206ENST00000605204 CEMIPQ8WUJ3 1361 aa25.52■■□□□ 1.68
SRSF4-206ENST00000605204 HTATSF1O43719 755 aaKnown RBP25.52■■□□□ 1.68
SRSF4-206ENST00000605204 SSFA2P28290 1259 aa25.52■■□□□ 1.68
SRSF4-206ENST00000605204 GPR162Q16538 588 aa25.52■■□□□ 1.68
SRSF4-206ENST00000605204 MSL1Q68DK7 614 aa25.52■■□□□ 1.68
SRSF4-206ENST00000605204 ITPK1Q13572 414 aa25.51■■□□□ 1.67
SRSF4-206ENST00000605204 LINC00116Q8NCU8 138 aa25.51■■□□□ 1.67
SRSF4-206ENST00000605204 RTF1Q92541 710 aaKnown RBP25.51■■□□□ 1.67
SRSF4-206ENST00000605204 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
SRSF4-206ENST00000605204 CICQ96RK0 1608 aaPredicted RBP25.49■■□□□ 1.67
SRSF4-206ENST00000605204 CNTNAP4Q9C0A0 1308 aa25.49■■□□□ 1.67
SRSF4-206ENST00000605204 RC3H1Q5TC82 1133 aaKnown RBP25.49■■□□□ 1.67
SRSF4-206ENST00000605204 IL17REQ8NFR9 667 aa25.49■■□□□ 1.67
SRSF4-206ENST00000605204 PTCD1O75127 700 aaKnown RBP25.48■■□□□ 1.67
SRSF4-206ENST00000605204 AMIGO3Q86WK7 504 aa25.48■■□□□ 1.67
SRSF4-206ENST00000605204 MAPK8IP3Q9UPT6 1336 aa25.47■■□□□ 1.67
SRSF4-206ENST00000605204 YBX3P16989 372 aaKnown RBP eCLIP25.47■■□□□ 1.67
SRSF4-206ENST00000605204 SLC4A9Q96Q91 983 aa25.47■■□□□ 1.67
SRSF4-206ENST00000605204 MSH5O43196 834 aa25.46■■□□□ 1.67
SRSF4-206ENST00000605204 TTC5Q8N0Z6 440 aa25.46■■□□□ 1.67
SRSF4-206ENST00000605204 VSIG10Q8N0Z9 540 aa25.46■■□□□ 1.67
SRSF4-206ENST00000605204 PLEKHF1Q96S99 279 aa25.46■■□□□ 1.67
SRSF4-206ENST00000605204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.45■■□□□ 1.67
SRSF4-206ENST00000605204 GNPATO15228 680 aa25.45■■□□□ 1.67
SRSF4-206ENST00000605204 ADRA2BP18089 450 aa25.45■■□□□ 1.67
SRSF4-206ENST00000605204 RTCBQ9Y3I0 505 aaKnown RBP25.44■■□□□ 1.66
SRSF4-206ENST00000605204 WDR43Q15061 677 aaKnown RBP eCLIP25.43■■□□□ 1.66
SRSF4-206ENST00000605204 KCPQ6ZWJ8 1503 aa25.42■■□□□ 1.66
SRSF4-206ENST00000605204 COL5A3P25940 1745 aaPredicted RBP25.42■■□□□ 1.66
SRSF4-206ENST00000605204 NFE2L2Q16236 605 aa25.42■■□□□ 1.66
SRSF4-206ENST00000605204 ZNF790Q6PG37 636 aa25.42■■□□□ 1.66
SRSF4-206ENST00000605204 SMIM5Q71RC9 77 aa25.42■■□□□ 1.66
SRSF4-206ENST00000605204 SLC39A6Q13433 755 aa25.41■■□□□ 1.66
SRSF4-206ENST00000605204 RPS6KA4O75676 772 aa25.4■■□□□ 1.66
SRSF4-206ENST00000605204 PHF14O94880 888 aa25.4■■□□□ 1.66
SRSF4-206ENST00000605204 C1QTNF8P60827 252 aa25.39■■□□□ 1.65
SRSF4-206ENST00000605204 VIRMAQ69YN4 1812 aaKnown RBP25.38■■□□□ 1.65
SRSF4-206ENST00000605204 SENP3-EIF4A1A0A087X0R7 540 aa25.38■■□□□ 1.65
SRSF4-206ENST00000605204 BTBD11A6QL63 1104 aa25.38■■□□□ 1.65
SRSF4-206ENST00000605204 CRKLP46109 303 aaKnown RBP25.38■■□□□ 1.65
SRSF4-206ENST00000605204 TRAPPC3LQ5T215 181 aa25.38■■□□□ 1.65
SRSF4-206ENST00000605204 TEX13AQ9BXU3 409 aaPredicted RBP25.38■■□□□ 1.65
SRSF4-206ENST00000605204 TJP1Q07157 1748 aa25.37■■□□□ 1.65
SRSF4-206ENST00000605204 SIPA1L3O60292 1781 aaPredicted RBP25.37■■□□□ 1.65
SRSF4-206ENST00000605204 UBR2Q8IWV8 1755 aa25.37■■□□□ 1.65
SRSF4-206ENST00000605204 MCM10Q7L590 875 aa25.37■■□□□ 1.65
SRSF4-206ENST00000605204 LMOD3Q0VAK6 560 aa25.36■■□□□ 1.65
SRSF4-206ENST00000605204 DNAJC10Q8IXB1 793 aa25.36■■□□□ 1.65
SRSF4-206ENST00000605204 FMNL2Q96PY5 1086 aa25.36■■□□□ 1.65
SRSF4-206ENST00000605204 CEP350Q5VT06 3117 aa25.36■■□□□ 1.65
SRSF4-206ENST00000605204 KIAA1551Q9HCM1 1747 aa25.36■■□□□ 1.65
SRSF4-206ENST00000605204 HEG1Q9ULI3 1381 aa25.36■■□□□ 1.65
SRSF4-206ENST00000605204 STARD3NLO95772 234 aa25.35■■□□□ 1.65
SRSF4-206ENST00000605204 PNISRQ8TF01 805 aaKnown RBP25.35■■□□□ 1.65
SRSF4-206ENST00000605204 CCDC87Q9NVE4 849 aa25.35■■□□□ 1.65
SRSF4-206ENST00000605204 ZNF496Q96IT1 587 aaPredicted RBP25.34■■□□□ 1.65
SRSF4-206ENST00000605204 CYP19A1P11511 503 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms