RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 SSFA2P28290 1259 aa16.52■□□□□ 0.24
UBE3B-213ENST00000605142 MORC1Q86VD1 984 aa16.51■□□□□ 0.23
UBE3B-213ENST00000605142 AK7Q96M32 723 aa16.51■□□□□ 0.23
UBE3B-213ENST00000605142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.49■□□□□ 0.23
UBE3B-213ENST00000605142 PHKG2P15735 406 aa16.49■□□□□ 0.23
UBE3B-213ENST00000605142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.49■□□□□ 0.23
UBE3B-213ENST00000605142 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
UBE3B-213ENST00000605142 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
UBE3B-213ENST00000605142 TGFB2P61812 414 aa16.47■□□□□ 0.23
UBE3B-213ENST00000605142 ITPK1Q13572 414 aa16.47■□□□□ 0.23
UBE3B-213ENST00000605142 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
UBE3B-213ENST00000605142 LINC00116Q8NCU8 138 aa16.47■□□□□ 0.23
UBE3B-213ENST00000605142 KIF13BQ9NQT8 1826 aa16.47■□□□□ 0.23
UBE3B-213ENST00000605142 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
UBE3B-213ENST00000605142 SIK1P57059 783 aa16.46■□□□□ 0.23
UBE3B-213ENST00000605142 IFNL2Q8IZJ0 200 aa16.45■□□□□ 0.22
UBE3B-213ENST00000605142 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
UBE3B-213ENST00000605142 RBM46Q8TBY0 533 aaKnown RBP16.45■□□□□ 0.22
UBE3B-213ENST00000605142 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
UBE3B-213ENST00000605142 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
UBE3B-213ENST00000605142 KDRP35968 1356 aa16.44■□□□□ 0.22
UBE3B-213ENST00000605142 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
UBE3B-213ENST00000605142 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
UBE3B-213ENST00000605142 KDM6AO15550 1401 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-213ENST00000605142 PXDNLA1KZ92 1463 aa16.43■□□□□ 0.22
UBE3B-213ENST00000605142 PLEKHG2Q9H7P9 1386 aa16.43■□□□□ 0.22
UBE3B-213ENST00000605142 PHF14O94880 888 aa16.43■□□□□ 0.22
UBE3B-213ENST00000605142 TMOD3Q9NYL9 352 aa16.43■□□□□ 0.22
UBE3B-213ENST00000605142 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
UBE3B-213ENST00000605142 FSTL1Q12841 308 aa16.42■□□□□ 0.22
UBE3B-213ENST00000605142 CC2D1BQ5T0F9 858 aaKnown RBP16.42■□□□□ 0.22
UBE3B-213ENST00000605142 KLRG1Q96E93 195 aa16.42■□□□□ 0.22
UBE3B-213ENST00000605142 KIAA1551Q9HCM1 1747 aa16.42■□□□□ 0.22
UBE3B-213ENST00000605142 MYH14Q7Z406 1995 aaKnown RBP16.41■□□□□ 0.22
UBE3B-213ENST00000605142 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-213ENST00000605142 NLGN1Q8N2Q7 840 aa16.41■□□□□ 0.22
UBE3B-213ENST00000605142 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
UBE3B-213ENST00000605142 COL5A3P25940 1745 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-213ENST00000605142 PCNTO95613 3336 aa16.4■□□□□ 0.22
UBE3B-213ENST00000605142 MMP10P09238 476 aa16.4■□□□□ 0.22
UBE3B-213ENST00000605142 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
UBE3B-213ENST00000605142 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
UBE3B-213ENST00000605142 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
UBE3B-213ENST00000605142 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.21
UBE3B-213ENST00000605142 GNPATO15228 680 aa16.38■□□□□ 0.21
UBE3B-213ENST00000605142 IL13P35225 146 aa16.38■□□□□ 0.21
UBE3B-213ENST00000605142 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
UBE3B-213ENST00000605142 ERVV-2B6SEH9 535 aa16.37■□□□□ 0.21
UBE3B-213ENST00000605142 ADRA2BP18089 450 aa16.37■□□□□ 0.21
UBE3B-213ENST00000605142 CNGB1Q14028 1251 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-213ENST00000605142 COL13A1Q5TAT6 717 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-213ENST00000605142 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-213ENST00000605142 ARHGAP27Q6ZUM4 889 aa16.37■□□□□ 0.21
UBE3B-213ENST00000605142 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
UBE3B-213ENST00000605142 BRCA1P38398 1863 aaKnown RBP16.37■□□□□ 0.21
UBE3B-213ENST00000605142 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-213ENST00000605142 PLEKHO1Q53GL0 409 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-213ENST00000605142 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
UBE3B-213ENST00000605142 C16orf71Q8IYS4 520 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-213ENST00000605142 SCN11AQ9UI33 1791 aa16.36■□□□□ 0.21
UBE3B-213ENST00000605142 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
UBE3B-213ENST00000605142 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
UBE3B-213ENST00000605142 PRELPP51888 382 aa16.35■□□□□ 0.21
UBE3B-213ENST00000605142 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
UBE3B-213ENST00000605142 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
UBE3B-213ENST00000605142 CCDC87Q9NVE4 849 aa16.35■□□□□ 0.21
UBE3B-213ENST00000605142 RTCBQ9Y3I0 505 aaKnown RBP16.35■□□□□ 0.21
UBE3B-213ENST00000605142 KDM2BQ8NHM5 1336 aa16.35■□□□□ 0.21
UBE3B-213ENST00000605142 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
UBE3B-213ENST00000605142 TJP1Q07157 1748 aa16.34■□□□□ 0.21
UBE3B-213ENST00000605142 MTHFSP49914 203 aa16.34■□□□□ 0.21
UBE3B-213ENST00000605142 FCHSD2O94868 740 aa16.33■□□□□ 0.2
UBE3B-213ENST00000605142 DPEP1P16444 411 aa16.33■□□□□ 0.2
UBE3B-213ENST00000605142 AMOTQ4VCS5 1084 aa16.33■□□□□ 0.2
UBE3B-213ENST00000605142 C9orf131Q5VYM1 1079 aa16.33■□□□□ 0.2
UBE3B-213ENST00000605142 COL3A1P02461 1466 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-213ENST00000605142 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.2
UBE3B-213ENST00000605142 HSP90AB1P08238 724 aaKnown RBP16.32■□□□□ 0.2
UBE3B-213ENST00000605142 KCNA3P22001 575 aa16.32■□□□□ 0.2
UBE3B-213ENST00000605142 TNS4Q8IZW8 715 aa16.32■□□□□ 0.2
UBE3B-213ENST00000605142 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
UBE3B-213ENST00000605142 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
UBE3B-213ENST00000605142 CNTNAP4Q9C0A0 1308 aa16.31■□□□□ 0.2
UBE3B-213ENST00000605142 GYS1P13807 737 aa16.31■□□□□ 0.2
UBE3B-213ENST00000605142 CABP4P57796 275 aa16.31■□□□□ 0.2
UBE3B-213ENST00000605142 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
UBE3B-213ENST00000605142 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
UBE3B-213ENST00000605142 PIM2Q9P1W9 311 aa16.31■□□□□ 0.2
UBE3B-213ENST00000605142 ZC3H4Q9UPT8 1303 aaKnown RBP16.3■□□□□ 0.2
UBE3B-213ENST00000605142 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
UBE3B-213ENST00000605142 ZEB1P37275 1124 aaPredicted RBP16.3■□□□□ 0.2
UBE3B-213ENST00000605142 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
UBE3B-213ENST00000605142 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
UBE3B-213ENST00000605142 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
UBE3B-213ENST00000605142 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
UBE3B-213ENST00000605142 MRC1P22897 1456 aa16.29■□□□□ 0.2
UBE3B-213ENST00000605142 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
UBE3B-213ENST00000605142 RFC4P35249 363 aa16.28■□□□□ 0.2
UBE3B-213ENST00000605142 HTRA3P83110 453 aa16.28■□□□□ 0.2
UBE3B-213ENST00000605142 DALRD3Q5D0E6 543 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms