RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 AXIN1O15169 862 aa7.46□□□□□ -1.22
TUBE1-209ENST00000604814 AVPP01185 164 aa7.46□□□□□ -1.22
TUBE1-209ENST00000604814 NR1H3Q13133 447 aa7.46□□□□□ -1.22
TUBE1-209ENST00000604814 NR5A1Q13285 461 aa7.46□□□□□ -1.22
TUBE1-209ENST00000604814 LARGE2Q8N3Y3 721 aa7.46□□□□□ -1.22
TUBE1-209ENST00000604814 DHX38Q92620 1227 aaKnown RBP7.46□□□□□ -1.22
TUBE1-209ENST00000604814 CDV3Q9UKY7 258 aaKnown RBP7.46□□□□□ -1.22
TUBE1-209ENST00000604814 PCDHB9Q9Y5E1 797 aa7.46□□□□□ -1.22
TUBE1-209ENST00000604814 FSHRP23945 695 aa7.45□□□□□ -1.22
TUBE1-209ENST00000604814 GRM5P41594 1212 aa7.45□□□□□ -1.22
TUBE1-209ENST00000604814 IGBP1P78318 339 aa7.45□□□□□ -1.22
TUBE1-209ENST00000604814 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
TUBE1-209ENST00000604814 SDE2Q6IQ49 451 aa7.45□□□□□ -1.22
TUBE1-209ENST00000604814 MAP4K5Q9Y4K4 846 aa7.45□□□□□ -1.22
TUBE1-209ENST00000604814 SCAMP3O14828 347 aaKnown RBP7.44□□□□□ -1.22
TUBE1-209ENST00000604814 ST8SIA5O15466 376 aa7.44□□□□□ -1.22
TUBE1-209ENST00000604814 CTC1Q2NKJ3 1217 aa7.44□□□□□ -1.22
TUBE1-209ENST00000604814 EGFLAMQ63HQ2 1017 aa7.44□□□□□ -1.22
TUBE1-209ENST00000604814 VTI1AQ96AJ9 217 aa7.44□□□□□ -1.22
TUBE1-209ENST00000604814 KCTD15Q96SI1 283 aaPredicted RBP7.44□□□□□ -1.22
TUBE1-209ENST00000604814 PTPROQ16827 1216 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 AAASQ9NRG9 546 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 PRKAG2Q9UGJ0 569 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 LCE2BO14633 110 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 NEFLP07196 543 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 GTF2F1P35269 517 aaKnown RBP eCLIP7.43□□□□□ -1.22
TUBE1-209ENST00000604814 SCNN1AP37088 669 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
TUBE1-209ENST00000604814 RAB15P59190 212 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 NBPF20Q3BBV1 942 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 CCDC181Q5TID7 509 aa7.43□□□□□ -1.22
TUBE1-209ENST00000604814 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
TUBE1-209ENST00000604814 CAPN5O15484 640 aaPredicted RBP7.42□□□□□ -1.22
TUBE1-209ENST00000604814 NR3C2P08235 984 aa7.42□□□□□ -1.22
TUBE1-209ENST00000604814 ATP2B4P23634 1241 aa7.42□□□□□ -1.22
TUBE1-209ENST00000604814 SPACA7Q96KW9 195 aa7.42□□□□□ -1.22
TUBE1-209ENST00000604814 ATP2B1P20020 1258 aa7.41□□□□□ -1.22
TUBE1-209ENST00000604814 MAPK1P28482 360 aa7.41□□□□□ -1.22
TUBE1-209ENST00000604814 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-209ENST00000604814 RAD51AP2Q09MP3 1159 aa7.41□□□□□ -1.22
TUBE1-209ENST00000604814 CCDC116Q8IYX3 515 aa7.41□□□□□ -1.22
TUBE1-209ENST00000604814 CLP1Q92989 425 aaKnown RBP7.41□□□□□ -1.22
TUBE1-209ENST00000604814 CRIPAKQ8N1N5 446 aa7.41□□□□□ -1.22
TUBE1-209ENST00000604814 KCNB2Q92953 911 aa7.41□□□□□ -1.22
TUBE1-209ENST00000604814 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
TUBE1-209ENST00000604814 USP17L15C9J2P7 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L10C9JJH3 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L12C9JPN9 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L11C9JVI0 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L21D6R901 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L18D6R9N7 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L22D6RA61 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L19D6RCP7 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L20D6RJB6 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 PEX14O75381 377 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 ZIC2O95409 532 aaPredicted RBP7.4□□□□□ -1.23
TUBE1-209ENST00000604814 IBSPP21815 317 aaPredicted RBP7.4□□□□□ -1.23
TUBE1-209ENST00000604814 MCCD1P59942 119 aaPredicted RBP7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L24Q0WX57 530 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 TBX22Q9Y458 520 aa7.4□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L3A6NCW0 530 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L4A6NCW7 530 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 PARNO95453 639 aaKnown RBP7.39□□□□□ -1.23
TUBE1-209ENST00000604814 MAP4K4O95819 1239 aaPredicted RBP7.39□□□□□ -1.23
TUBE1-209ENST00000604814 ABL1P00519 1130 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 ANAPC15P60006 121 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 EIF4G2P78344 907 aaKnown RBP eCLIP7.39□□□□□ -1.23
TUBE1-209ENST00000604814 DHX9Q08211 1270 aaKnown RBP7.39□□□□□ -1.23
TUBE1-209ENST00000604814 FAM69CQ0P6D2 419 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 INTS6LQ5JSJ4 861 aaKnown RBP7.39□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L2Q6R6M4 530 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 USP17L1Q7RTZ2 530 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 NT5DC4Q86YG4 428 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 ASB16Q96NS5 453 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 PIF1Q9H611 641 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 EMILIN1Q9Y6C2 1016 aa7.39□□□□□ -1.23
TUBE1-209ENST00000604814 FAM196BA6NMK8 535 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 H3BRB1 525 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 TIMP2P16035 220 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 MRPL58Q14197 206 aaKnown RBP7.38□□□□□ -1.23
TUBE1-209ENST00000604814 CRTC2Q53ET0 693 aaPredicted RBP7.38□□□□□ -1.23
TUBE1-209ENST00000604814 EAPPQ56P03 285 aaPredicted RBP7.38□□□□□ -1.23
TUBE1-209ENST00000604814 PPP1R26Q5T8A7 1209 aaPredicted RBP7.38□□□□□ -1.23
TUBE1-209ENST00000604814 NLGN1Q8N2Q7 840 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 PMFBP1Q8TBY8 1022 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 MORC4Q8TE76 937 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 ITPKCQ96DU7 683 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 TUT1Q9H6E5 874 aaKnown RBP7.38□□□□□ -1.23
TUBE1-209ENST00000604814 ZFAND3Q9H8U3 227 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 PGPEP1Q9NXJ5 209 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 DACH1Q9UI36 760 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 PIK3CDO00329 1044 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 LZTS3O60299 673 aaPredicted RBP7.38□□□□□ -1.23
TUBE1-209ENST00000604814 GIGYF1O75420 1035 aaPredicted RBP7.38□□□□□ -1.23
TUBE1-209ENST00000604814 PSME1Q06323 249 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 TEX2Q8IWB9 1127 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 FAM200AQ8TCP9 573 aa7.38□□□□□ -1.23
TUBE1-209ENST00000604814 ZSWIM4Q9H7M6 989 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms