RNA–Protein interactions for RNA: ENST00000604419.1

SRGAP2-210, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-210ENST00000604419 DCAF5Q96JK2 942 aa13.32□□□□□ -0.28
SRGAP2-210ENST00000604419 TOGARAM1Q9Y4F4 1720 aa13.32□□□□□ -0.28
SRGAP2-210ENST00000604419 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
SRGAP2-210ENST00000604419 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
SRGAP2-210ENST00000604419 ATP10DQ9P241 1426 aa13.31□□□□□ -0.28
SRGAP2-210ENST00000604419 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
SRGAP2-210ENST00000604419 TNNT2P45379 298 aaPredicted RBP13.31□□□□□ -0.28
SRGAP2-210ENST00000604419 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
SRGAP2-210ENST00000604419 PLEKHO1Q53GL0 409 aaPredicted RBP13.31□□□□□ -0.28
SRGAP2-210ENST00000604419 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
SRGAP2-210ENST00000604419 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
SRGAP2-210ENST00000604419 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
SRGAP2-210ENST00000604419 TGFB2P61812 414 aa13.3□□□□□ -0.28
SRGAP2-210ENST00000604419 EIF4G2P78344 907 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRGAP2-210ENST00000604419 SMIM5Q71RC9 77 aa13.3□□□□□ -0.28
SRGAP2-210ENST00000604419 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
SRGAP2-210ENST00000604419 MMP10P09238 476 aa13.29□□□□□ -0.28
SRGAP2-210ENST00000604419 CABP4P57796 275 aa13.28□□□□□ -0.28
SRGAP2-210ENST00000604419 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
SRGAP2-210ENST00000604419 PANK3Q9H999 370 aa13.28□□□□□ -0.28
SRGAP2-210ENST00000604419 ADCY9O60503 1353 aa13.28□□□□□ -0.28
SRGAP2-210ENST00000604419 RPS6KA4O75676 772 aa13.27□□□□□ -0.29
SRGAP2-210ENST00000604419 RFC4P35249 363 aa13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 MTHFSP49914 203 aa13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 C1orf141Q5JVX7 400 aa13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 PCGF6Q9BYE7 350 aa13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 CNTNAP4Q9C0A0 1308 aa13.26□□□□□ -0.29
SRGAP2-210ENST00000604419 KDRP35968 1356 aa13.25□□□□□ -0.29
SRGAP2-210ENST00000604419 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
SRGAP2-210ENST00000604419 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
SRGAP2-210ENST00000604419 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
SRGAP2-210ENST00000604419 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
SRGAP2-210ENST00000604419 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
SRGAP2-210ENST00000604419 GYS1P13807 737 aa13.24□□□□□ -0.29
SRGAP2-210ENST00000604419 HSPA6P17066 643 aa13.24□□□□□ -0.29
SRGAP2-210ENST00000604419 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
SRGAP2-210ENST00000604419 A0A0G2JLW4 131 aa13.23□□□□□ -0.29
SRGAP2-210ENST00000604419 NFATC2IPQ8NCF5 419 aa13.23□□□□□ -0.29
SRGAP2-210ENST00000604419 BCS1LQ9Y276 419 aa13.23□□□□□ -0.29
SRGAP2-210ENST00000604419 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
SRGAP2-210ENST00000604419 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
SRGAP2-210ENST00000604419 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
SRGAP2-210ENST00000604419 SULT6B1Q6IMI4 303 aa13.21□□□□□ -0.29
SRGAP2-210ENST00000604419 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.29
SRGAP2-210ENST00000604419 KDM6AO15550 1401 aaPredicted RBP13.21□□□□□ -0.3
SRGAP2-210ENST00000604419 KIF3CO14782 793 aa13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 FCHSD2O94868 740 aa13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 DPEP1P16444 411 aa13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 IL13P35225 146 aa13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 CRKLP46109 303 aaKnown RBP13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 AKAP4Q5JQC9 854 aa13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 AEBP1Q8IUX7 1158 aa13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
SRGAP2-210ENST00000604419 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
SRGAP2-210ENST00000604419 CICQ96RK0 1608 aaPredicted RBP13.19□□□□□ -0.3
SRGAP2-210ENST00000604419 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
SRGAP2-210ENST00000604419 TOMM70O94826 608 aa13.18□□□□□ -0.3
SRGAP2-210ENST00000604419 KCNA3P22001 575 aa13.18□□□□□ -0.3
SRGAP2-210ENST00000604419 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
SRGAP2-210ENST00000604419 ZPR1O75312 459 aa13.17□□□□□ -0.3
SRGAP2-210ENST00000604419 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
SRGAP2-210ENST00000604419 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
SRGAP2-210ENST00000604419 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
SRGAP2-210ENST00000604419 TM4SF1P30408 202 aa13.16□□□□□ -0.3
SRGAP2-210ENST00000604419 APLP1P51693 650 aa13.16□□□□□ -0.3
SRGAP2-210ENST00000604419 FKBP8Q14318 412 aa13.16□□□□□ -0.3
SRGAP2-210ENST00000604419 DALRD3Q5D0E6 543 aaKnown RBP13.16□□□□□ -0.3
SRGAP2-210ENST00000604419 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
SRGAP2-210ENST00000604419 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
SRGAP2-210ENST00000604419 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
SRGAP2-210ENST00000604419 SRP68Q9UHB9 627 aaKnown RBP13.15□□□□□ -0.3
SRGAP2-210ENST00000604419 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
SRGAP2-210ENST00000604419 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
SRGAP2-210ENST00000604419 N4BP2Q86UW6 1770 aaPredicted RBP13.14□□□□□ -0.31
SRGAP2-210ENST00000604419 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
SRGAP2-210ENST00000604419 KIAA1551Q9HCM1 1747 aa13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 POLRMTO00411 1230 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 CYP19A1P11511 503 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 DDR1Q08345 913 aa13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 DNAJC10Q8IXB1 793 aa13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
SRGAP2-210ENST00000604419 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-210ENST00000604419 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
SRGAP2-210ENST00000604419 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-210ENST00000604419 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
SRGAP2-210ENST00000604419 SOS1Q07889 1333 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2-210ENST00000604419 HMOX1P09601 288 aa13.11□□□□□ -0.31
SRGAP2-210ENST00000604419 NMRK2Q9NPI5 230 aa13.11□□□□□ -0.31
SRGAP2-210ENST00000604419 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2-210ENST00000604419 STARD3NLO95772 234 aa13.1□□□□□ -0.31
SRGAP2-210ENST00000604419 CHRNA5P30532 468 aa13.1□□□□□ -0.31
SRGAP2-210ENST00000604419 FSTL1Q12841 308 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms