RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
SRGAP2-209ENST00000604247 ANKLE2Q86XL3 938 aa15.98■□□□□ 0.15
SRGAP2-209ENST00000604247 PNMA6EA0A0J9YXQ4 647 aa15.97■□□□□ 0.15
SRGAP2-209ENST00000604247 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
SRGAP2-209ENST00000604247 OSBPL3Q9H4L5 887 aa15.97■□□□□ 0.15
SRGAP2-209ENST00000604247 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
SRGAP2-209ENST00000604247 ABTB2Q8N961 1025 aa15.97■□□□□ 0.15
SRGAP2-209ENST00000604247 NWD1Q149M9 1564 aa15.97■□□□□ 0.15
SRGAP2-209ENST00000604247 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
SRGAP2-209ENST00000604247 ERC2O15083 957 aa15.96■□□□□ 0.15
SRGAP2-209ENST00000604247 REC8O95072 547 aa15.96■□□□□ 0.15
SRGAP2-209ENST00000604247 BAG4O95429 457 aaKnown RBP15.96■□□□□ 0.15
SRGAP2-209ENST00000604247 PKP1Q13835 747 aa15.96■□□□□ 0.15
SRGAP2-209ENST00000604247 USHBP1Q8N6Y0 703 aa15.96■□□□□ 0.15
SRGAP2-209ENST00000604247 CLEC17AQ6ZS10 378 aa15.95■□□□□ 0.14
SRGAP2-209ENST00000604247 PHF8Q9UPP1 1060 aa15.95■□□□□ 0.14
SRGAP2-209ENST00000604247 CHD2O14647 1828 aaKnown RBP15.95■□□□□ 0.14
SRGAP2-209ENST00000604247 ATP8B2P98198 1209 aa15.94■□□□□ 0.14
SRGAP2-209ENST00000604247 C14orf37Q86TY3 774 aa15.94■□□□□ 0.14
SRGAP2-209ENST00000604247 ZGPATQ8N5A5 531 aaKnown RBP15.94■□□□□ 0.14
SRGAP2-209ENST00000604247 LRRCC1Q9C099 1032 aa15.94■□□□□ 0.14
SRGAP2-209ENST00000604247 GNAI3P08754 354 aa15.94■□□□□ 0.14
SRGAP2-209ENST00000604247 TAF7Q15545 349 aaPredicted RBP15.94■□□□□ 0.14
SRGAP2-209ENST00000604247 SETD1BQ9UPS6 1966 aaKnown RBP15.94■□□□□ 0.14
SRGAP2-209ENST00000604247 ST18O60284 1047 aa15.93■□□□□ 0.14
SRGAP2-209ENST00000604247 LRRFIP2Q9Y608 721 aaKnown RBP15.93■□□□□ 0.14
SRGAP2-209ENST00000604247 SALL3Q9BXA9 1300 aa15.93■□□□□ 0.14
SRGAP2-209ENST00000604247 ADAMTSL3P82987 1691 aa15.93■□□□□ 0.14
SRGAP2-209ENST00000604247 MAP3K5Q99683 1374 aa15.93■□□□□ 0.14
SRGAP2-209ENST00000604247 GOLGA6L22H0YM25 854 aa15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 PTMSP20962 102 aa15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 USP44Q9H0E7 712 aa15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 PHAXQ9H814 394 aaKnown RBP15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 ZNF142P52746 1687 aaPredicted RBP15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 MX1P20591 662 aa15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 ISY1Q9ULR0 285 aaKnown RBP15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 DDX49Q9Y6V7 483 aaKnown RBP15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
SRGAP2-209ENST00000604247 LRRC37A3O60309 1634 aa15.91■□□□□ 0.14
SRGAP2-209ENST00000604247 CYP2E1P05181 493 aaPredicted RBP15.91■□□□□ 0.14
SRGAP2-209ENST00000604247 NUCB2P80303 420 aa15.91■□□□□ 0.14
SRGAP2-209ENST00000604247 MCTP1Q6DN14 999 aa15.91■□□□□ 0.14
SRGAP2-209ENST00000604247 RILPL2Q969X0 211 aa15.91■□□□□ 0.14
SRGAP2-209ENST00000604247 CACNA1FO60840 1977 aa15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 TRIM6-TRIM34B2RNG4 842 aa15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 ESCO1Q5FWF5 840 aa15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 ORAI2Q96SN7 254 aa15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 ESYT1Q9BSJ8 1104 aa15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 USP54Q70EL1 1684 aa15.9■□□□□ 0.14
SRGAP2-209ENST00000604247 NEK4P51957 841 aa15.89■□□□□ 0.13
SRGAP2-209ENST00000604247 UNC5CLQ8IV45 518 aa15.89■□□□□ 0.13
SRGAP2-209ENST00000604247 EIF2S2P20042 333 aaKnown RBP15.89■□□□□ 0.13
SRGAP2-209ENST00000604247 XPCQ01831 940 aaPredicted RBP15.89■□□□□ 0.13
SRGAP2-209ENST00000604247 KLHL40Q2TBA0 621 aa15.89■□□□□ 0.13
SRGAP2-209ENST00000604247 CWC22Q9HCG8 908 aaKnown RBP15.89■□□□□ 0.13
SRGAP2-209ENST00000604247 IL1RAPL2Q9NP60 686 aa15.89■□□□□ 0.13
SRGAP2-209ENST00000604247 ZDHHC9Q9Y397 364 aa15.89■□□□□ 0.13
SRGAP2-209ENST00000604247 UBTFL1P0CB47 393 aaPredicted RBP15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 TUBGCP6Q96RT7 1819 aa15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 CHMLP26374 656 aa15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 NBPF6Q5VWK0 638 aa15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 CHAMP1Q96JM3 812 aa15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 NBPF4Q96M43 638 aa15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 PALD1Q9ULE6 856 aa15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 NFAT5O94916 1531 aa15.88■□□□□ 0.13
SRGAP2-209ENST00000604247 LMBRD1Q9NUN5 540 aa15.87■□□□□ 0.13
SRGAP2-209ENST00000604247 BABAM1Q9NWV8 329 aa15.87■□□□□ 0.13
SRGAP2-209ENST00000604247 NPHP4O75161 1426 aaPredicted RBP15.87■□□□□ 0.13
SRGAP2-209ENST00000604247 ZBTB7CA1YPR0 619 aa15.87■□□□□ 0.13
SRGAP2-209ENST00000604247 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 NUTM1Q86Y26 1132 aa15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 ANO2Q9NQ90 1003 aa15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 STAP2Q9UGK3 403 aa15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 SOS1Q07889 1333 aaPredicted RBP15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 KCNQ3O43525 872 aa15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 PPP1R42Q7Z4L9 355 aa15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 TMX3Q96JJ7 454 aa15.86■□□□□ 0.13
SRGAP2-209ENST00000604247 PSME1Q06323 249 aa15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 SSH3Q8TE77 659 aa15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 PRPF40AO75400 957 aaKnown RBP15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 FOXD4L5Q5VV16 416 aaPredicted RBP15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 FOXD4L4Q8WXT5 416 aaPredicted RBP15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 IP6K1Q92551 441 aa15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 IL25Q9H293 177 aa15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 LTN1O94822 1766 aa15.85■□□□□ 0.13
SRGAP2-209ENST00000604247 NBPF7P0C2Y1 421 aaPredicted RBP15.84■□□□□ 0.13
SRGAP2-209ENST00000604247 EIF4A1P60842 406 aaKnown RBP15.84■□□□□ 0.13
SRGAP2-209ENST00000604247 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
SRGAP2-209ENST00000604247 NOL8Q76FK4 1167 aaKnown RBP15.84■□□□□ 0.13
SRGAP2-209ENST00000604247 SRCIN1Q9C0H9 1055 aa15.84■□□□□ 0.13
SRGAP2-209ENST00000604247 MAP4K4O95819 1239 aaPredicted RBP15.84■□□□□ 0.13
SRGAP2-209ENST00000604247 ANXA1P04083 346 aa15.84■□□□□ 0.13
SRGAP2-209ENST00000604247 LRRC59Q96AG4 307 aaKnown RBP15.84■□□□□ 0.13
SRGAP2-209ENST00000604247 CHPF2Q9P2E5 772 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms