RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, human

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-222	ENST00000604236		K7ELQ4	463 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR2-222	ENST00000604236	ALK	Q9UM73	1620 aa		18.84	■□□□□ 0.61
FGFR2-222	ENST00000604236	UNC5CL	Q8IV45	518 aa		18.84	■□□□□ 0.61
FGFR2-222	ENST00000604236	TMEM131L	A2VDJ0	1609 aa		18.84	■□□□□ 0.61
FGFR2-222	ENST00000604236	STK11IP	Q8N1F8	1099 aa		18.84	■□□□□ 0.61
FGFR2-222	ENST00000604236	LRRCC1	Q9C099	1032 aa		18.84	■□□□□ 0.61
FGFR2-222	ENST00000604236	PTMA	P06454	111 aa	Known RBP	18.83	■□□□□ 0.6
FGFR2-222	ENST00000604236	CHMP4C	Q96CF2	233 aa		18.83	■□□□□ 0.6
FGFR2-222	ENST00000604236	ST18	O60284	1047 aa		18.82	■□□□□ 0.6
FGFR2-222	ENST00000604236	NEUROD6	Q96NK8	337 aa		18.82	■□□□□ 0.6
FGFR2-222	ENST00000604236	CD163L1	Q9NR16	1453 aa		18.82	■□□□□ 0.6
FGFR2-222	ENST00000604236	USP32	Q8NFA0	1604 aa		18.82	■□□□□ 0.6
FGFR2-222	ENST00000604236	XRCC6	P12956	609 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
FGFR2-222	ENST00000604236	SRCIN1	Q9C0H9	1055 aa		18.82	■□□□□ 0.6
FGFR2-222	ENST00000604236	HOXC9	P31274	260 aa		18.81	■□□□□ 0.6
FGFR2-222	ENST00000604236	BMP2KL	Q5H9B9	411 aa		18.81	■□□□□ 0.6
FGFR2-222	ENST00000604236	FERMT3	Q86UX7	667 aa		18.81	■□□□□ 0.6
FGFR2-222	ENST00000604236	BOLA2	Q9H3K6	86 aa		18.81	■□□□□ 0.6
FGFR2-222	ENST00000604236	IL16	Q14005	1332 aa		18.81	■□□□□ 0.6
FGFR2-222	ENST00000604236	CHL1	O00533	1208 aa		18.8	■□□□□ 0.6
FGFR2-222	ENST00000604236	PROSER3	Q2NL68	480 aa		18.8	■□□□□ 0.6
FGFR2-222	ENST00000604236	TTC22	Q5TAA0	569 aa		18.8	■□□□□ 0.6
FGFR2-222	ENST00000604236	ANKLE2	Q86XL3	938 aa		18.8	■□□□□ 0.6
FGFR2-222	ENST00000604236	EDC3	Q96F86	508 aa	Known RBP	18.8	■□□□□ 0.6
FGFR2-222	ENST00000604236	DNAJC2	Q99543	621 aa	Known RBP	18.8	■□□□□ 0.6
FGFR2-222	ENST00000604236	VPS37C	A5D8V6	355 aa	Predicted RBP	18.8	■□□□□ 0.6
FGFR2-222	ENST00000604236	RAPGEF4	Q8WZA2	1011 aa		18.8	■□□□□ 0.6
FGFR2-222	ENST00000604236	IFIT2	P09913	472 aa	Known RBP	18.79	■□□□□ 0.6
FGFR2-222	ENST00000604236	MX1	P20591	662 aa		18.79	■□□□□ 0.6
FGFR2-222	ENST00000604236	DIAPH3	Q9NSV4	1193 aa		18.79	■□□□□ 0.6
FGFR2-222	ENST00000604236	PALD1	Q9ULE6	856 aa		18.79	■□□□□ 0.6
FGFR2-222	ENST00000604236	PDE1A	P54750	535 aa		18.78	■□□□□ 0.6
FGFR2-222	ENST00000604236	CEBPZ	Q03701	1054 aa	Known RBP	18.78	■□□□□ 0.6
FGFR2-222	ENST00000604236	ANKRD44	Q8N8A2	993 aa		18.78	■□□□□ 0.6
FGFR2-222	ENST00000604236	ARHGEF40	Q8TER5	1519 aa		18.78	■□□□□ 0.6
FGFR2-222	ENST00000604236	MAP3K2	Q9Y2U5	619 aa		18.78	■□□□□ 0.6
FGFR2-222	ENST00000604236	DCTPP1	Q9H773	170 aa		18.78	■□□□□ 0.6
FGFR2-222	ENST00000604236	A2ML1	A8K2U0	1454 aa		18.78	■□□□□ 0.6
FGFR2-222	ENST00000604236	NFATC2IP	Q8NCF5	419 aa		18.77	■□□□□ 0.6
FGFR2-222	ENST00000604236	COL3A1	P02461	1466 aa	Predicted RBP	18.77	■□□□□ 0.59
FGFR2-222	ENST00000604236	FIBP	O43427	364 aa		18.77	■□□□□ 0.59
FGFR2-222	ENST00000604236	AACS	Q86V21	672 aa		18.77	■□□□□ 0.59
FGFR2-222	ENST00000604236	REC8	O95072	547 aa		18.76	■□□□□ 0.59
FGFR2-222	ENST00000604236	NCBP3	Q53F19	620 aa	Known RBP	18.76	■□□□□ 0.59
FGFR2-222	ENST00000604236	ERC2	O15083	957 aa		18.76	■□□□□ 0.59
FGFR2-222	ENST00000604236	MCC	P23508	829 aa		18.75	■□□□□ 0.59
FGFR2-222	ENST00000604236	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.75	■□□□□ 0.59
FGFR2-222	ENST00000604236	L1TD1	Q5T7N2	865 aa	Known RBP	18.75	■□□□□ 0.59
FGFR2-222	ENST00000604236	RAB11FIP4	Q86YS3	637 aa		18.75	■□□□□ 0.59
FGFR2-222	ENST00000604236	ANKRD24	Q8TF21	1146 aa		18.75	■□□□□ 0.59
FGFR2-222	ENST00000604236	LRRC2	Q9BYS8	371 aa		18.75	■□□□□ 0.59
FGFR2-222	ENST00000604236	NLRP1	Q9C000	1473 aa		18.75	■□□□□ 0.59
FGFR2-222	ENST00000604236	CLTC	Q00610	1675 aa	Known RBP	18.74	■□□□□ 0.59
FGFR2-222	ENST00000604236	TMEM2	Q9UHN6	1383 aa		18.74	■□□□□ 0.59
FGFR2-222	ENST00000604236	DNTTIP2	Q5QJE6	756 aa	Known RBP	18.74	■□□□□ 0.59
FGFR2-222	ENST00000604236	PPP6R1	Q9UPN7	881 aa		18.74	■□□□□ 0.59
FGFR2-222	ENST00000604236	PNPLA6	Q8IY17	1366 aa		18.74	■□□□□ 0.59
FGFR2-222	ENST00000604236	GNAI3	P08754	354 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	ATF3	P18847	181 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	CCT4	P50991	539 aa	Known RBP	18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	GAS2L3	Q86XJ1	694 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	TTC5	Q8N0Z6	440 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	NECAB1	Q8N987	351 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	ADGRB2	O60241	1585 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	GC	P02774	474 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	MYD88	Q99836	296 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	ANTXR1	Q9H6X2	564 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	LRRC7	Q96NW7	1537 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	SYCE3	A1L190	88 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	CPS1	P31327	1500 aa		18.73	■□□□□ 0.59
FGFR2-222	ENST00000604236	CHGB	P05060	677 aa		18.72	■□□□□ 0.59
FGFR2-222	ENST00000604236	ZBTB3	Q9H5J0	574 aa		18.72	■□□□□ 0.59
FGFR2-222	ENST00000604236	PRPF40B	Q6NWY9	871 aa	Known RBP	18.72	■□□□□ 0.59
FGFR2-222	ENST00000604236	KRT28	Q7Z3Y7	464 aa		18.72	■□□□□ 0.59
FGFR2-222	ENST00000604236	HSP90B1	P14625	803 aa	Known RBP	18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	FAM173B	Q6P4H8	233 aa		18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	GRPEL1	Q9HAV7	217 aa		18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	DDX11L8	A8MPP1	907 aa		18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	HSP90AB3P	Q58FF7	597 aa		18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	ZNF853	P0CG23	659 aa		18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	SLFNL1	Q499Z3	407 aa		18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	RRAGD	Q9NQL2	400 aa	Predicted RBP	18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	AXIN2	Q9Y2T1	843 aa		18.71	■□□□□ 0.59
FGFR2-222	ENST00000604236	DNAAF4	Q8WXU2	420 aa		18.7	■□□□□ 0.58
FGFR2-222	ENST00000604236	USP44	Q9H0E7	712 aa		18.7	■□□□□ 0.58
FGFR2-222	ENST00000604236	SNRK	Q9NRH2	765 aa		18.7	■□□□□ 0.58
FGFR2-222	ENST00000604236	EVA1C	P58658	441 aa		18.7	■□□□□ 0.58
FGFR2-222	ENST00000604236	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.7	■□□□□ 0.58
FGFR2-222	ENST00000604236	CLASRP	Q8N2M8	674 aa	Known RBP	18.7	■□□□□ 0.58
FGFR2-222	ENST00000604236	FSD1	Q9BTV5	496 aa		18.7	■□□□□ 0.58
FGFR2-222	ENST00000604236	EDC4	Q6P2E9	1401 aa	Known RBP	18.7	■□□□□ 0.58
FGFR2-222	ENST00000604236	FAM135B	Q49AJ0	1406 aa		18.69	■□□□□ 0.58
FGFR2-222	ENST00000604236	USP26	Q9BXU7	913 aa		18.69	■□□□□ 0.58
FGFR2-222	ENST00000604236	TOM1L2	Q6ZVM7	507 aa		18.69	■□□□□ 0.58
FGFR2-222	ENST00000604236	CCDC83	Q8IWF9	413 aa		18.69	■□□□□ 0.58
FGFR2-222	ENST00000604236	MED14	O60244	1454 aa		18.69	■□□□□ 0.58
FGFR2-222	ENST00000604236	BAG4	O95429	457 aa	Known RBP	18.69	■□□□□ 0.58
FGFR2-222	ENST00000604236	UBE3B	Q7Z3V4	1068 aa		18.69	■□□□□ 0.58
FGFR2-222	ENST00000604236	GORAB	Q5T7V8	394 aa		18.68	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms