RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 CABP4P57796 275 aa24.46■■□□□ 1.51
CCDC12-208ENST00000603885 MAP3K5Q99683 1374 aa24.45■■□□□ 1.5
CCDC12-208ENST00000603885 ATP6V1AP38606 617 aa24.45■■□□□ 1.5
CCDC12-208ENST00000603885 LINC00116Q8NCU8 138 aa24.44■■□□□ 1.5
CCDC12-208ENST00000603885 COL3A1P02461 1466 aaPredicted RBP24.44■■□□□ 1.5
CCDC12-208ENST00000603885 ITPK1Q13572 414 aa24.43■■□□□ 1.5
CCDC12-208ENST00000603885 AKAP4Q5JQC9 854 aa24.42■■□□□ 1.5
CCDC12-208ENST00000603885 UBR3Q6ZT12 1888 aa24.42■■□□□ 1.5
CCDC12-208ENST00000603885 KLHL34Q8N239 644 aa24.41■■□□□ 1.5
CCDC12-208ENST00000603885 RBM42Q9BTD8 480 aaKnown RBP24.41■■□□□ 1.5
CCDC12-208ENST00000603885 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.4■■□□□ 1.5
CCDC12-208ENST00000603885 PHF14O94880 888 aa24.4■■□□□ 1.5
CCDC12-208ENST00000603885 SSFA2P28290 1259 aa24.4■■□□□ 1.5
CCDC12-208ENST00000603885 MSL1Q68DK7 614 aa24.4■■□□□ 1.5
CCDC12-208ENST00000603885 ZNF831Q5JPB2 1677 aa24.4■■□□□ 1.5
CCDC12-208ENST00000603885 SCN11AQ9UI33 1791 aa24.39■■□□□ 1.5
CCDC12-208ENST00000603885 U2SURPO15042 1029 aaKnown RBP24.39■■□□□ 1.49
CCDC12-208ENST00000603885 AMIGO3Q86WK7 504 aa24.39■■□□□ 1.49
CCDC12-208ENST00000603885 NFATC2IPQ8NCF5 419 aa24.39■■□□□ 1.49
CCDC12-208ENST00000603885 GNPATO15228 680 aa24.38■■□□□ 1.49
CCDC12-208ENST00000603885 CFAP53Q96M91 514 aa24.38■■□□□ 1.49
CCDC12-208ENST00000603885 SLC4A9Q96Q91 983 aa24.37■■□□□ 1.49
CCDC12-208ENST00000603885 MTHFSDQ2M296 383 aaKnown RBP24.36■■□□□ 1.49
CCDC12-208ENST00000603885 SMIM5Q71RC9 77 aa24.35■■□□□ 1.49
CCDC12-208ENST00000603885 YY1P25490 414 aa24.34■■□□□ 1.49
CCDC12-208ENST00000603885 SLC52A2Q9HAB3 445 aa24.34■■□□□ 1.49
CCDC12-208ENST00000603885 COL5A3P25940 1745 aaPredicted RBP24.33■■□□□ 1.49
CCDC12-208ENST00000603885 RNMTO43148 476 aaKnown RBP24.33■■□□□ 1.49
CCDC12-208ENST00000603885 PTCD1O75127 700 aaKnown RBP24.33■■□□□ 1.49
CCDC12-208ENST00000603885 LGR6Q9HBX8 967 aa24.33■■□□□ 1.49
CCDC12-208ENST00000603885 MRC1P22897 1456 aa24.32■■□□□ 1.48
CCDC12-208ENST00000603885 PPP2R1AP30153 589 aa24.32■■□□□ 1.48
CCDC12-208ENST00000603885 RC3H1Q5TC82 1133 aaKnown RBP24.32■■□□□ 1.48
CCDC12-208ENST00000603885 RTCBQ9Y3I0 505 aaKnown RBP24.32■■□□□ 1.48
CCDC12-208ENST00000603885 CNTNAP4Q9C0A0 1308 aa24.32■■□□□ 1.48
CCDC12-208ENST00000603885 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
CCDC12-208ENST00000603885 GAS2L2Q8NHY3 880 aa24.3■■□□□ 1.48
CCDC12-208ENST00000603885 NUDCQ9Y266 331 aa24.3■■□□□ 1.48
CCDC12-208ENST00000603885 ADAMTS7Q9UKP4 1686 aa24.3■■□□□ 1.48
CCDC12-208ENST00000603885 NLGN2Q8NFZ4 835 aa24.29■■□□□ 1.48
CCDC12-208ENST00000603885 UTRNP46939 3433 aa24.29■■□□□ 1.48
CCDC12-208ENST00000603885 GPR162Q16538 588 aa24.28■■□□□ 1.48
CCDC12-208ENST00000603885 TRAPPC3LQ5T215 181 aa24.28■■□□□ 1.48
CCDC12-208ENST00000603885 ADRA2BP18089 450 aa24.27■■□□□ 1.48
CCDC12-208ENST00000603885 CICQ96RK0 1608 aaPredicted RBP24.27■■□□□ 1.48
CCDC12-208ENST00000603885 RPS6KA4O75676 772 aa24.26■■□□□ 1.47
CCDC12-208ENST00000603885 CD2APQ9Y5K6 639 aa24.26■■□□□ 1.47
CCDC12-208ENST00000603885 TJP1Q07157 1748 aa24.25■■□□□ 1.47
CCDC12-208ENST00000603885 GNAT3A8MTJ3 354 aa24.25■■□□□ 1.47
CCDC12-208ENST00000603885 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
CCDC12-208ENST00000603885 RSPH6AQ9H0K4 717 aa24.25■■□□□ 1.47
CCDC12-208ENST00000603885 MYH14Q7Z406 1995 aaKnown RBP24.25■■□□□ 1.47
CCDC12-208ENST00000603885 CRKLP46109 303 aaKnown RBP24.24■■□□□ 1.47
CCDC12-208ENST00000603885 SLC39A6Q13433 755 aa24.24■■□□□ 1.47
CCDC12-208ENST00000603885 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
CCDC12-208ENST00000603885 U2AF1L5P0DN76 240 aaPredicted RBP24.23■■□□□ 1.47
CCDC12-208ENST00000603885 U2AF1Q01081 240 aaKnown RBP eCLIP24.23■■□□□ 1.47
CCDC12-208ENST00000603885 ARHGEF1Q92888 912 aaKnown RBP24.23■■□□□ 1.47
CCDC12-208ENST00000603885 GOLGB1Q14789 3259 aaKnown RBP24.23■■□□□ 1.47
CCDC12-208ENST00000603885 RFC4P35249 363 aa24.22■■□□□ 1.47
CCDC12-208ENST00000603885 KCPQ6ZWJ8 1503 aa24.21■■□□□ 1.47
CCDC12-208ENST00000603885 TEFQ10587 303 aa24.21■■□□□ 1.47
CCDC12-208ENST00000603885 NLGN1Q8N2Q7 840 aa24.21■■□□□ 1.47
CCDC12-208ENST00000603885 PHACTR3Q96KR7 559 aa24.21■■□□□ 1.47
CCDC12-208ENST00000603885 MMP10P09238 476 aa24.2■■□□□ 1.46
CCDC12-208ENST00000603885 DNAJC10Q8IXB1 793 aa24.2■■□□□ 1.46
CCDC12-208ENST00000603885 CHD4Q14839 1912 aa24.2■■□□□ 1.46
CCDC12-208ENST00000603885 C4AP0C0L4 1744 aa24.19■■□□□ 1.46
CCDC12-208ENST00000603885 FCHSD2O94868 740 aa24.19■■□□□ 1.46
CCDC12-208ENST00000603885 TTC5Q8N0Z6 440 aa24.19■■□□□ 1.46
CCDC12-208ENST00000603885 IL17REQ8NFR9 667 aa24.19■■□□□ 1.46
CCDC12-208ENST00000603885 CCDC87Q9NVE4 849 aa24.18■■□□□ 1.46
CCDC12-208ENST00000603885 UBR2Q8IWV8 1755 aa24.17■■□□□ 1.46
CCDC12-208ENST00000603885 GYS1P13807 737 aa24.17■■□□□ 1.46
CCDC12-208ENST00000603885 INTS5Q6P9B9 1019 aaKnown RBP24.17■■□□□ 1.46
CCDC12-208ENST00000603885 VSIG10Q8N0Z9 540 aa24.17■■□□□ 1.46
CCDC12-208ENST00000603885 CEMIPQ8WUJ3 1361 aa24.16■■□□□ 1.46
CCDC12-208ENST00000603885 GRIN3BO60391 1043 aa24.15■■□□□ 1.46
CCDC12-208ENST00000603885 CYP19A1P11511 503 aaPredicted RBP24.15■■□□□ 1.46
CCDC12-208ENST00000603885 SIPA1L3O60292 1781 aaPredicted RBP24.15■■□□□ 1.46
CCDC12-208ENST00000603885 YBX3P16989 372 aaKnown RBP eCLIP24.14■■□□□ 1.45
CCDC12-208ENST00000603885 USP42Q9H9J4 1324 aaKnown RBP24.13■■□□□ 1.45
CCDC12-208ENST00000603885 ZNF790Q6PG37 636 aa24.13■■□□□ 1.45
CCDC12-208ENST00000603885 SOS1Q07889 1333 aaPredicted RBP24.12■■□□□ 1.45
CCDC12-208ENST00000603885 RTF1Q92541 710 aaKnown RBP24.12■■□□□ 1.45
CCDC12-208ENST00000603885 SRP68Q9UHB9 627 aaKnown RBP24.12■■□□□ 1.45
CCDC12-208ENST00000603885 ZNF496Q96IT1 587 aaPredicted RBP24.11■■□□□ 1.45
CCDC12-208ENST00000603885 PARP3Q9Y6F1 533 aa24.11■■□□□ 1.45
CCDC12-208ENST00000603885 STARD3NLO95772 234 aa24.1■■□□□ 1.45
CCDC12-208ENST00000603885 NEFMP07197 916 aa24.1■■□□□ 1.45
CCDC12-208ENST00000603885 ZBTB1Q9Y2K1 713 aa24.1■■□□□ 1.45
CCDC12-208ENST00000603885 HEG1Q9ULI3 1381 aa24.1■■□□□ 1.45
CCDC12-208ENST00000603885 BTBD11A6QL63 1104 aa24.09■■□□□ 1.45
CCDC12-208ENST00000603885 ZPR1O75312 459 aa24.09■■□□□ 1.45
CCDC12-208ENST00000603885 DDX10Q13206 875 aaKnown RBP24.09■■□□□ 1.45
CCDC12-208ENST00000603885 RALBP1Q15311 655 aa24.09■■□□□ 1.45
CCDC12-208ENST00000603885 C10orf71Q711Q0 1435 aa24.09■■□□□ 1.45
CCDC12-208ENST00000603885 KIF13BQ9NQT8 1826 aa24.08■■□□□ 1.45
CCDC12-208ENST00000603885 COL15A1P39059 1388 aa24.08■■□□□ 1.45
CCDC12-208ENST00000603885 FKBP8Q14318 412 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms