RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 CABP4P57796 275 aa22.16■■□□□ 1.14
TUBE1-206ENST00000603722 ITPK1Q13572 414 aa22.16■■□□□ 1.14
TUBE1-206ENST00000603722 AMIGO3Q86WK7 504 aa22.16■■□□□ 1.14
TUBE1-206ENST00000603722 C4BP0C0L5 1744 aa22.16■■□□□ 1.14
TUBE1-206ENST00000603722 PHF14O94880 888 aa22.15■■□□□ 1.14
TUBE1-206ENST00000603722 ATP6V1AP38606 617 aa22.15■■□□□ 1.14
TUBE1-206ENST00000603722 FLAD1Q8NFF5 587 aa22.15■■□□□ 1.14
TUBE1-206ENST00000603722 SMIM5Q71RC9 77 aa22.14■■□□□ 1.13
TUBE1-206ENST00000603722 UTRNP46939 3433 aa22.13■■□□□ 1.13
TUBE1-206ENST00000603722 COL3A1P02461 1466 aaPredicted RBP22.12■■□□□ 1.13
TUBE1-206ENST00000603722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.12■■□□□ 1.13
TUBE1-206ENST00000603722 RBM42Q9BTD8 480 aaKnown RBP22.12■■□□□ 1.13
TUBE1-206ENST00000603722 GNPATO15228 680 aa22.11■■□□□ 1.13
TUBE1-206ENST00000603722 YY1P25490 414 aa22.11■■□□□ 1.13
TUBE1-206ENST00000603722 AKAP4Q5JQC9 854 aa22.11■■□□□ 1.13
TUBE1-206ENST00000603722 SSFA2P28290 1259 aa22.1■■□□□ 1.13
TUBE1-206ENST00000603722 SLC4A9Q96Q91 983 aa22.1■■□□□ 1.13
TUBE1-206ENST00000603722 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
TUBE1-206ENST00000603722 NFATC2IPQ8NCF5 419 aa22.09■■□□□ 1.13
TUBE1-206ENST00000603722 COL24A1Q17RW2 1714 aa22.09■■□□□ 1.13
TUBE1-206ENST00000603722 TAF1LQ8IZX4 1826 aa22.08■■□□□ 1.13
TUBE1-206ENST00000603722 MTHFSDQ2M296 383 aaKnown RBP22.07■■□□□ 1.12
TUBE1-206ENST00000603722 NLGN2Q8NFZ4 835 aa22.07■■□□□ 1.12
TUBE1-206ENST00000603722 PTCD1O75127 700 aaKnown RBP22.06■■□□□ 1.12
TUBE1-206ENST00000603722 SLC52A2Q9HAB3 445 aa22.04■■□□□ 1.12
TUBE1-206ENST00000603722 LGR6Q9HBX8 967 aa22.04■■□□□ 1.12
TUBE1-206ENST00000603722 RNMTO43148 476 aaKnown RBP22.03■■□□□ 1.12
TUBE1-206ENST00000603722 CFAP53Q96M91 514 aa22.03■■□□□ 1.12
TUBE1-206ENST00000603722 RTCBQ9Y3I0 505 aaKnown RBP22.03■■□□□ 1.12
TUBE1-206ENST00000603722 CNTNAP4Q9C0A0 1308 aa22.03■■□□□ 1.12
TUBE1-206ENST00000603722 GPR162Q16538 588 aa22.02■■□□□ 1.12
TUBE1-206ENST00000603722 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
TUBE1-206ENST00000603722 MRC1P22897 1456 aa22.02■■□□□ 1.12
TUBE1-206ENST00000603722 UBR3Q6ZT12 1888 aa22.01■■□□□ 1.11
TUBE1-206ENST00000603722 PPP2R1AP30153 589 aa22.01■■□□□ 1.11
TUBE1-206ENST00000603722 RC3H1Q5TC82 1133 aaKnown RBP22■■□□□ 1.11
TUBE1-206ENST00000603722 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
TUBE1-206ENST00000603722 ZNF831Q5JPB2 1677 aa21.99■■□□□ 1.11
TUBE1-206ENST00000603722 TRAPPC3LQ5T215 181 aa21.99■■□□□ 1.11
TUBE1-206ENST00000603722 CD2APQ9Y5K6 639 aa21.98■■□□□ 1.11
TUBE1-206ENST00000603722 ADRA2BP18089 450 aa21.97■■□□□ 1.11
TUBE1-206ENST00000603722 CRKLP46109 303 aaKnown RBP21.97■■□□□ 1.11
TUBE1-206ENST00000603722 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
TUBE1-206ENST00000603722 GAS2L2Q8NHY3 880 aa21.97■■□□□ 1.11
TUBE1-206ENST00000603722 ARHGEF1Q92888 912 aaKnown RBP21.97■■□□□ 1.11
TUBE1-206ENST00000603722 RPS6KA4O75676 772 aa21.96■■□□□ 1.11
TUBE1-206ENST00000603722 PRKAR2BP31323 418 aa21.96■■□□□ 1.11
TUBE1-206ENST00000603722 NUDCQ9Y266 331 aa21.96■■□□□ 1.11
TUBE1-206ENST00000603722 COL5A3P25940 1745 aaPredicted RBP21.95■■□□□ 1.1
TUBE1-206ENST00000603722 SCN11AQ9UI33 1791 aa21.95■■□□□ 1.1
TUBE1-206ENST00000603722 RSPH6AQ9H0K4 717 aa21.95■■□□□ 1.1
TUBE1-206ENST00000603722 MMP10P09238 476 aa21.94■■□□□ 1.1
TUBE1-206ENST00000603722 U2AF1L5P0DN76 240 aaPredicted RBP21.94■■□□□ 1.1
TUBE1-206ENST00000603722 RFC4P35249 363 aa21.94■■□□□ 1.1
TUBE1-206ENST00000603722 U2AF1Q01081 240 aaKnown RBP eCLIP21.94■■□□□ 1.1
TUBE1-206ENST00000603722 DNAJC10Q8IXB1 793 aa21.94■■□□□ 1.1
TUBE1-206ENST00000603722 ADAMTS7Q9UKP4 1686 aa21.94■■□□□ 1.1
TUBE1-206ENST00000603722 GNAT3A8MTJ3 354 aa21.93■■□□□ 1.1
TUBE1-206ENST00000603722 YBX3P16989 372 aaKnown RBP eCLIP21.93■■□□□ 1.1
TUBE1-206ENST00000603722 KCPQ6ZWJ8 1503 aa21.93■■□□□ 1.1
TUBE1-206ENST00000603722 PHACTR3Q96KR7 559 aa21.93■■□□□ 1.1
TUBE1-206ENST00000603722 TJP1Q07157 1748 aa21.92■■□□□ 1.1
TUBE1-206ENST00000603722 GYS1P13807 737 aa21.91■■□□□ 1.1
TUBE1-206ENST00000603722 TEFQ10587 303 aa21.91■■□□□ 1.1
TUBE1-206ENST00000603722 INTS5Q6P9B9 1019 aaKnown RBP21.91■■□□□ 1.1
TUBE1-206ENST00000603722 NLGN1Q8N2Q7 840 aa21.91■■□□□ 1.1
TUBE1-206ENST00000603722 IL17REQ8NFR9 667 aa21.91■■□□□ 1.1
TUBE1-206ENST00000603722 CICQ96RK0 1608 aaPredicted RBP21.91■■□□□ 1.1
TUBE1-206ENST00000603722 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
TUBE1-206ENST00000603722 CCDC87Q9NVE4 849 aa21.89■■□□□ 1.09
TUBE1-206ENST00000603722 SRP68Q9UHB9 627 aaKnown RBP21.89■■□□□ 1.09
TUBE1-206ENST00000603722 CYP19A1P11511 503 aaPredicted RBP21.88■■□□□ 1.09
TUBE1-206ENST00000603722 WWC3Q9ULE0 1092 aa21.88■■□□□ 1.09
TUBE1-206ENST00000603722 USP42Q9H9J4 1324 aaKnown RBP21.87■■□□□ 1.09
TUBE1-206ENST00000603722 GRIN3BO60391 1043 aa21.87■■□□□ 1.09
TUBE1-206ENST00000603722 VSIG10Q8N0Z9 540 aa21.87■■□□□ 1.09
TUBE1-206ENST00000603722 ZNF784Q8NCA9 323 aaPredicted RBP21.87■■□□□ 1.09
TUBE1-206ENST00000603722 CEMIPQ8WUJ3 1361 aa21.87■■□□□ 1.09
TUBE1-206ENST00000603722 SOS1Q07889 1333 aaPredicted RBP21.86■■□□□ 1.09
TUBE1-206ENST00000603722 FCHSD2O94868 740 aa21.86■■□□□ 1.09
TUBE1-206ENST00000603722 FKBP8Q14318 412 aa21.85■■□□□ 1.09
TUBE1-206ENST00000603722 ZNF790Q6PG37 636 aa21.85■■□□□ 1.09
TUBE1-206ENST00000603722 ZBTB1Q9Y2K1 713 aa21.85■■□□□ 1.09
TUBE1-206ENST00000603722 C4AP0C0L4 1744 aa21.84■■□□□ 1.09
TUBE1-206ENST00000603722 C10orf71Q711Q0 1435 aa21.84■■□□□ 1.09
TUBE1-206ENST00000603722 ZNF496Q96IT1 587 aaPredicted RBP21.84■■□□□ 1.09
TUBE1-206ENST00000603722 PARP3Q9Y6F1 533 aa21.84■■□□□ 1.09
TUBE1-206ENST00000603722 MYH14Q7Z406 1995 aaKnown RBP21.82■■□□□ 1.08
TUBE1-206ENST00000603722 RTF1Q92541 710 aaKnown RBP21.82■■□□□ 1.08
TUBE1-206ENST00000603722 COL15A1P39059 1388 aa21.82■■□□□ 1.08
TUBE1-206ENST00000603722 HEG1Q9ULI3 1381 aa21.82■■□□□ 1.08
TUBE1-206ENST00000603722 PXDNLA1KZ92 1463 aa21.82■■□□□ 1.08
TUBE1-206ENST00000603722 BTBD11A6QL63 1104 aa21.81■■□□□ 1.08
TUBE1-206ENST00000603722 ZPR1O75312 459 aa21.81■■□□□ 1.08
TUBE1-206ENST00000603722 STARD3NLO95772 234 aa21.81■■□□□ 1.08
TUBE1-206ENST00000603722 USPL1Q5W0Q7 1092 aa21.81■■□□□ 1.08
TUBE1-206ENST00000603722 MCM10Q7L590 875 aa21.81■■□□□ 1.08
TUBE1-206ENST00000603722 CANXP27824 592 aaKnown RBP21.8■■□□□ 1.08
TUBE1-206ENST00000603722 DDR1Q08345 913 aa21.8■■□□□ 1.08
TUBE1-206ENST00000603722 FMNL2Q96PY5 1086 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms