RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 ESYT1Q9BSJ8 1104 aa9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 POLMQ9NP87 494 aaPredicted RBP9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 NOVA2Q9UNW9 492 aaKnown RBP9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 DKK1O94907 266 aa9.24□□□□□ -0.93
UBE2E3-212ENST00000602888 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
UBE2E3-212ENST00000602888 ZNF358Q9NW07 568 aa9.24□□□□□ -0.93
UBE2E3-212ENST00000602888 SFI1A8K8P3 1242 aa9.23□□□□□ -0.93
UBE2E3-212ENST00000602888 BACH1O14867 736 aa9.23□□□□□ -0.93
UBE2E3-212ENST00000602888 CTSOP43234 321 aaPredicted RBP9.23□□□□□ -0.93
UBE2E3-212ENST00000602888 SEC13P55735 322 aa9.23□□□□□ -0.93
UBE2E3-212ENST00000602888 FAM200AQ8TCP9 573 aa9.23□□□□□ -0.93
UBE2E3-212ENST00000602888 ARXQ96QS3 562 aa9.23□□□□□ -0.93
UBE2E3-212ENST00000602888 SERTAD1Q9UHV2 236 aa9.23□□□□□ -0.93
UBE2E3-212ENST00000602888 ZMIZ1Q9ULJ6 1067 aa9.23□□□□□ -0.93
UBE2E3-212ENST00000602888 GPC1P35052 558 aa9.22□□□□□ -0.93
UBE2E3-212ENST00000602888 SENP2Q9HC62 589 aa9.22□□□□□ -0.93
UBE2E3-212ENST00000602888 HRH3Q9Y5N1 445 aa9.22□□□□□ -0.93
UBE2E3-212ENST00000602888 TTLL8A6PVC2 850 aa9.21□□□□□ -0.94
UBE2E3-212ENST00000602888 M0R2N6 131 aa9.21□□□□□ -0.94
UBE2E3-212ENST00000602888 RNF144AP50876 292 aaPredicted RBP9.21□□□□□ -0.94
UBE2E3-212ENST00000602888 TLR1Q15399 786 aa9.21□□□□□ -0.94
UBE2E3-212ENST00000602888 STK32AQ8WU08 396 aa9.21□□□□□ -0.94
UBE2E3-212ENST00000602888 SLC4A9Q96Q91 983 aa9.21□□□□□ -0.94
UBE2E3-212ENST00000602888 CSB-PGBD3P0DP91 1061 aa9.2□□□□□ -0.94
UBE2E3-212ENST00000602888 SMTNP53814 917 aa9.2□□□□□ -0.94
UBE2E3-212ENST00000602888 CENPCQ03188 943 aa9.2□□□□□ -0.94
UBE2E3-212ENST00000602888 FOXD4L5Q5VV16 416 aaPredicted RBP9.2□□□□□ -0.94
UBE2E3-212ENST00000602888 KIFC2Q96AC6 838 aa9.2□□□□□ -0.94
UBE2E3-212ENST00000602888 SOS2Q07890 1332 aaPredicted RBP9.2□□□□□ -0.94
UBE2E3-212ENST00000602888 SLC27A3Q5K4L6 730 aa9.19□□□□□ -0.94
UBE2E3-212ENST00000602888 TSEN2Q8NCE0 465 aaKnown RBP9.19□□□□□ -0.94
UBE2E3-212ENST00000602888 RNF217Q8TC41 542 aa9.19□□□□□ -0.94
UBE2E3-212ENST00000602888 FHDC1Q9C0D6 1143 aaPredicted RBP9.19□□□□□ -0.94
UBE2E3-212ENST00000602888 GMPR2Q9P2T1 348 aaKnown RBP9.19□□□□□ -0.94
UBE2E3-212ENST00000602888 A6NJY4 79 aa9.18□□□□□ -0.94
UBE2E3-212ENST00000602888 GTF2E1P29083 439 aaPredicted RBP9.18□□□□□ -0.94
UBE2E3-212ENST00000602888 TMEM164Q5U3C3 297 aa9.18□□□□□ -0.94
UBE2E3-212ENST00000602888 TRIM47Q96LD4 638 aa9.18□□□□□ -0.94
UBE2E3-212ENST00000602888 ZSCAN10Q96SZ4 725 aaPredicted RBP9.18□□□□□ -0.94
UBE2E3-212ENST00000602888 MTFR1Q15390 333 aa9.17□□□□□ -0.94
UBE2E3-212ENST00000602888 TNS4Q8IZW8 715 aa9.17□□□□□ -0.94
UBE2E3-212ENST00000602888 HINFPQ9BQA5 517 aa9.17□□□□□ -0.94
UBE2E3-212ENST00000602888 GRIP2Q9C0E4 1043 aa9.17□□□□□ -0.94
UBE2E3-212ENST00000602888 FIGNL2A6NMB9 653 aa9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 MAN1A2O60476 641 aa9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 EPHA4P54764 986 aa9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 SWI5Q1ZZU3 235 aa9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 TMEM214Q6NUQ4 689 aaKnown RBP9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 LYSMD3Q7Z3D4 306 aa9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 RETREG2Q8NC44 543 aa9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 SCHIP1Q9P0W5 487 aaPredicted RBP9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 DNMT3LQ9UJW3 386 aa9.16□□□□□ -0.94
UBE2E3-212ENST00000602888 CDK2AP1O14519 115 aa9.15□□□□□ -0.94
UBE2E3-212ENST00000602888 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.94
UBE2E3-212ENST00000602888 NBPF15Q8N660 670 aa9.15□□□□□ -0.94
UBE2E3-212ENST00000602888 USTQ9Y2C2 406 aa9.15□□□□□ -0.94
UBE2E3-212ENST00000602888 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
UBE2E3-212ENST00000602888 FOXK2Q01167 660 aa9.14□□□□□ -0.95
UBE2E3-212ENST00000602888 FAM69CQ0P6D2 419 aa9.14□□□□□ -0.95
UBE2E3-212ENST00000602888 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.95
UBE2E3-212ENST00000602888 GNASQ5JWF2 1037 aa9.14□□□□□ -0.95
UBE2E3-212ENST00000602888 PRICKLE2Q7Z3G6 844 aa9.14□□□□□ -0.95
UBE2E3-212ENST00000602888 TMEM88BA6NKF7 163 aa9.13□□□□□ -0.95
UBE2E3-212ENST00000602888 SPATA31C2B4DYI2 1134 aa9.13□□□□□ -0.95
UBE2E3-212ENST00000602888 SNRPBP14678 240 aaKnown RBP9.13□□□□□ -0.95
UBE2E3-212ENST00000602888 SLC9A9Q8IVB4 645 aa9.13□□□□□ -0.95
UBE2E3-212ENST00000602888 RHBDD1Q8TEB9 315 aa9.13□□□□□ -0.95
UBE2E3-212ENST00000602888 TSPAN10Q9H1Z9 355 aaPredicted RBP9.13□□□□□ -0.95
UBE2E3-212ENST00000602888 IQSEC3Q9UPP2 1182 aaPredicted RBP9.13□□□□□ -0.95
UBE2E3-212ENST00000602888 SOBPA7XYQ1 873 aa9.12□□□□□ -0.95
UBE2E3-212ENST00000602888 LGR5O75473 907 aa9.12□□□□□ -0.95
UBE2E3-212ENST00000602888 TAS1R3Q7RTX0 852 aa9.12□□□□□ -0.95
UBE2E3-212ENST00000602888 USP3Q9Y6I4 520 aa9.12□□□□□ -0.95
UBE2E3-212ENST00000602888 POTECB2RU33 542 aa9.11□□□□□ -0.95
UBE2E3-212ENST00000602888 PDE4CQ08493 712 aa9.11□□□□□ -0.95
UBE2E3-212ENST00000602888 POU4F2Q12837 409 aa9.11□□□□□ -0.95
UBE2E3-212ENST00000602888 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
UBE2E3-212ENST00000602888 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
UBE2E3-212ENST00000602888 CLP1Q92989 425 aaKnown RBP9.11□□□□□ -0.95
UBE2E3-212ENST00000602888 NIFKQ9BYG3 293 aaKnown RBP9.11□□□□□ -0.95
UBE2E3-212ENST00000602888 C4orf17Q53FE4 359 aa9.1□□□□□ -0.95
UBE2E3-212ENST00000602888 SCG3Q8WXD2 468 aaKnown RBP9.1□□□□□ -0.95
UBE2E3-212ENST00000602888 CABP1Q9NZU7 370 aa9.1□□□□□ -0.95
UBE2E3-212ENST00000602888 PRMT3O60678 531 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 RHOQP17081 205 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 IGFBP4P22692 258 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 WEE1P30291 646 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 PSMA6P60900 246 aaKnown RBP9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 WDR44Q5JSH3 913 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 ZNF295-AS1Q8N0V1 137 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 GAS2L2Q8NHY3 880 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 CHMP3Q9Y3E7 222 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
UBE2E3-212ENST00000602888 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
UBE2E3-212ENST00000602888 C21orf2O43822 256 aa9.08□□□□□ -0.96
UBE2E3-212ENST00000602888 PPP1R12BO60237 982 aaPredicted RBP9.08□□□□□ -0.96
UBE2E3-212ENST00000602888 PHKA2P46019 1235 aa9.08□□□□□ -0.96
UBE2E3-212ENST00000602888 PLA2G4AP47712 749 aa9.08□□□□□ -0.96
UBE2E3-212ENST00000602888 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
UBE2E3-212ENST00000602888 ATP2B4P23634 1241 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms