RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 AAMPQ13685 434 aa13.63□□□□□ -0.23
SCN1B-205ENST00000602150 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
SCN1B-205ENST00000602150 ERBB3P21860 1342 aa13.62□□□□□ -0.23
SCN1B-205ENST00000602150 ZNF853P0CG23 659 aa13.62□□□□□ -0.23
SCN1B-205ENST00000602150 DDIT3P35638 169 aa13.62□□□□□ -0.23
SCN1B-205ENST00000602150 ZNF330Q9Y3S2 320 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-205ENST00000602150 SPATA31A3Q5VYP0 1347 aa13.62□□□□□ -0.23
SCN1B-205ENST00000602150 CHL1O00533 1208 aa13.62□□□□□ -0.23
SCN1B-205ENST00000602150 IL16Q14005 1332 aa13.61□□□□□ -0.23
SCN1B-205ENST00000602150 DLG5Q8TDM6 1919 aa13.61□□□□□ -0.23
SCN1B-205ENST00000602150 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
SCN1B-205ENST00000602150 FKBP5Q13451 457 aaPredicted RBP13.61□□□□□ -0.23
SCN1B-205ENST00000602150 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
SCN1B-205ENST00000602150 PLEKHO1Q53GL0 409 aaPredicted RBP13.61□□□□□ -0.23
SCN1B-205ENST00000602150 MAP3K5Q99683 1374 aa13.6□□□□□ -0.23
SCN1B-205ENST00000602150 BTBD11A6QL63 1104 aa13.6□□□□□ -0.23
SCN1B-205ENST00000602150 IPO8O15397 1037 aaKnown RBP13.6□□□□□ -0.23
SCN1B-205ENST00000602150 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
SCN1B-205ENST00000602150 PDCL3Q9H2J4 239 aa13.6□□□□□ -0.23
SCN1B-205ENST00000602150 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
SCN1B-205ENST00000602150 NCOA3Q9Y6Q9 1424 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 TPM2P07951 284 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 HDGFL1Q5TGJ6 251 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 PDZRN3Q9UPQ7 1066 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 RGPD2P0DJD1 1756 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 STRCQ7RTU9 1775 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 PXDNQ92626 1479 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 SPRYD3Q8NCJ5 442 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 STK31Q9BXU1 1019 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 LTN1O94822 1766 aa13.59□□□□□ -0.23
SCN1B-205ENST00000602150 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
SCN1B-205ENST00000602150 TAF7Q15545 349 aaPredicted RBP13.58□□□□□ -0.24
SCN1B-205ENST00000602150 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
SCN1B-205ENST00000602150 SYTL4Q96C24 671 aaPredicted RBP13.58□□□□□ -0.24
SCN1B-205ENST00000602150 BTG4Q9NY30 223 aa13.58□□□□□ -0.24
SCN1B-205ENST00000602150 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
SCN1B-205ENST00000602150 LNPKQ9C0E8 428 aa13.58□□□□□ -0.24
SCN1B-205ENST00000602150 MYL6BP14649 208 aa13.58□□□□□ -0.24
SCN1B-205ENST00000602150 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
SCN1B-205ENST00000602150 TNS3Q68CZ2 1445 aa13.57□□□□□ -0.24
SCN1B-205ENST00000602150 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
SCN1B-205ENST00000602150 KDRP35968 1356 aa13.57□□□□□ -0.24
SCN1B-205ENST00000602150 NFAT5O94916 1531 aa13.56□□□□□ -0.24
SCN1B-205ENST00000602150 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
SCN1B-205ENST00000602150 CRB1P82279 1406 aa13.56□□□□□ -0.24
SCN1B-205ENST00000602150 JARID2Q92833 1246 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-205ENST00000602150 MEIS3Q99687 375 aa13.56□□□□□ -0.24
SCN1B-205ENST00000602150 CHPF2Q9P2E5 772 aa13.56□□□□□ -0.24
SCN1B-205ENST00000602150 DDX19BQ9UMR2 479 aa13.56□□□□□ -0.24
SCN1B-205ENST00000602150 NWD1Q149M9 1564 aa13.56□□□□□ -0.24
SCN1B-205ENST00000602150 MED1Q15648 1581 aaPredicted RBP13.55□□□□□ -0.24
SCN1B-205ENST00000602150 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
SCN1B-205ENST00000602150 RNMTO43148 476 aaKnown RBP13.55□□□□□ -0.24
SCN1B-205ENST00000602150 PROSER3Q2NL68 480 aa13.55□□□□□ -0.24
SCN1B-205ENST00000602150 MARF1Q9Y4F3 1742 aaKnown RBP13.54□□□□□ -0.24
SCN1B-205ENST00000602150 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
SCN1B-205ENST00000602150 RGPD5Q99666 1765 aa13.54□□□□□ -0.24
SCN1B-205ENST00000602150 CYP27B1O15528 508 aa13.54□□□□□ -0.24
SCN1B-205ENST00000602150 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
SCN1B-205ENST00000602150 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
SCN1B-205ENST00000602150 ANKRD45Q5TZF3 282 aa13.53□□□□□ -0.24
SCN1B-205ENST00000602150 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
SCN1B-205ENST00000602150 FLIIQ13045 1269 aa13.52□□□□□ -0.24
SCN1B-205ENST00000602150 GOLGB1Q14789 3259 aaKnown RBP13.52□□□□□ -0.24
SCN1B-205ENST00000602150 TRIM44Q96DX7 344 aaPredicted RBP13.52□□□□□ -0.25
SCN1B-205ENST00000602150 PPP1R9BQ96SB3 815 aa13.52□□□□□ -0.25
SCN1B-205ENST00000602150 RTL1A6NKG5 1358 aa13.52□□□□□ -0.25
SCN1B-205ENST00000602150 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.25
SCN1B-205ENST00000602150 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.25
SCN1B-205ENST00000602150 MEGF6O75095 1541 aa13.51□□□□□ -0.25
SCN1B-205ENST00000602150 SNX21Q969T3 373 aa13.51□□□□□ -0.25
SCN1B-205ENST00000602150 ZBTB40Q9NUA8 1239 aa13.51□□□□□ -0.25
SCN1B-205ENST00000602150 PRDM4Q9UKN5 801 aa13.51□□□□□ -0.25
SCN1B-205ENST00000602150 TERF1P54274 439 aa13.51□□□□□ -0.25
SCN1B-205ENST00000602150 TNPO1Q92973 898 aaKnown RBP13.51□□□□□ -0.25
SCN1B-205ENST00000602150 API5Q9BZZ5 524 aaKnown RBP13.51□□□□□ -0.25
SCN1B-205ENST00000602150 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
SCN1B-205ENST00000602150 SMC5Q8IY18 1101 aa13.5□□□□□ -0.25
SCN1B-205ENST00000602150 CABP4P57796 275 aa13.5□□□□□ -0.25
SCN1B-205ENST00000602150 CCDC30Q5VVM6 783 aa13.5□□□□□ -0.25
SCN1B-205ENST00000602150 SOS2Q07890 1332 aaPredicted RBP13.5□□□□□ -0.25
SCN1B-205ENST00000602150 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
SCN1B-205ENST00000602150 EIF4A1P60842 406 aaKnown RBP13.49□□□□□ -0.25
SCN1B-205ENST00000602150 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-205ENST00000602150 OFD1O75665 1012 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 PHKG2P15735 406 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 AMOTQ4VCS5 1084 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 FAM182BQ5T319 152 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 PI4KAP2A4QPH2 592 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 MFAP1P55081 439 aaKnown RBP13.49□□□□□ -0.25
SCN1B-205ENST00000602150 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-205ENST00000602150 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 PI4KAP1Q8N8J0 262 aa13.49□□□□□ -0.25
SCN1B-205ENST00000602150 ZNF496Q96IT1 587 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-205ENST00000602150 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
SCN1B-205ENST00000602150 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms