RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
LINC00343-209ENST00000601607 SEPT12Q8IYM1 358 aa12.09□□□□□ -0.47
LINC00343-209ENST00000601607 SPATA31D1Q6ZQQ2 1576 aa12.09□□□□□ -0.47
LINC00343-209ENST00000601607 FAM181BA6NEQ2 426 aa12.08□□□□□ -0.48
LINC00343-209ENST00000601607 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
LINC00343-209ENST00000601607 TMPRSS4Q9NRS4 437 aa12.08□□□□□ -0.48
LINC00343-209ENST00000601607 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
LINC00343-209ENST00000601607 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
LINC00343-209ENST00000601607 H3BM21 787 aa12.06□□□□□ -0.48
LINC00343-209ENST00000601607 CBLBQ13191 982 aa12.05□□□□□ -0.48
LINC00343-209ENST00000601607 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
LINC00343-209ENST00000601607 MEIOBQ8N635 442 aa12.05□□□□□ -0.48
LINC00343-209ENST00000601607 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-209ENST00000601607 CEP126Q9P2H0 1117 aa12.05□□□□□ -0.48
LINC00343-209ENST00000601607 ARID3CA6NKF2 412 aa12.04□□□□□ -0.48
LINC00343-209ENST00000601607 PURBQ96QR8 312 aaKnown RBP12.03□□□□□ -0.48
LINC00343-209ENST00000601607 PHLDB1Q86UU1 1377 aa12.03□□□□□ -0.48
LINC00343-209ENST00000601607 ABCA8O94911 1581 aa12.02□□□□□ -0.49
LINC00343-209ENST00000601607 UPP2O95045 317 aa12.02□□□□□ -0.49
LINC00343-209ENST00000601607 SEMA3FQ13275 785 aa12.02□□□□□ -0.49
LINC00343-209ENST00000601607 C6orf118Q5T5N4 469 aa12.02□□□□□ -0.49
LINC00343-209ENST00000601607 CYLDQ9NQC7 956 aa12.02□□□□□ -0.49
LINC00343-209ENST00000601607 RIMS1Q86UR5 1692 aaKnown RBP12.02□□□□□ -0.49
LINC00343-209ENST00000601607 GMPRP36959 345 aa12.01□□□□□ -0.49
LINC00343-209ENST00000601607 Q6ZVU0 165 aa12.01□□□□□ -0.49
LINC00343-209ENST00000601607 CCDC125Q86Z20 511 aa12.01□□□□□ -0.49
LINC00343-209ENST00000601607 LINC00528Q8N1L1 170 aa12.01□□□□□ -0.49
LINC00343-209ENST00000601607 LILRA1O75019 489 aa12□□□□□ -0.49
LINC00343-209ENST00000601607 BMP2P12643 396 aa12□□□□□ -0.49
LINC00343-209ENST00000601607 SOX11P35716 441 aa12□□□□□ -0.49
LINC00343-209ENST00000601607 TSEN34Q9BSV6 310 aaKnown RBP12□□□□□ -0.49
LINC00343-209ENST00000601607 PCDHB11Q9Y5F2 797 aa12□□□□□ -0.49
LINC00343-209ENST00000601607 FRMPD1Q5SYB0 1578 aa12□□□□□ -0.49
LINC00343-209ENST00000601607 SLFNL1Q499Z3 407 aa11.99□□□□□ -0.49
LINC00343-209ENST00000601607 PROSER2Q86WR7 435 aaPredicted RBP11.99□□□□□ -0.49
LINC00343-209ENST00000601607 AGBL1Q96MI9 1066 aa11.99□□□□□ -0.49
LINC00343-209ENST00000601607 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
LINC00343-209ENST00000601607 NEO1Q92859 1461 aa11.98□□□□□ -0.49
LINC00343-209ENST00000601607 POM121CA8CG34 1229 aa11.98□□□□□ -0.49
LINC00343-209ENST00000601607 ADD1P35611 737 aaKnown RBP11.98□□□□□ -0.49
LINC00343-209ENST00000601607 ZSCAN1Q8NBB4 408 aa11.98□□□□□ -0.49
LINC00343-209ENST00000601607 TRIM52Q96A61 297 aa11.98□□□□□ -0.49
LINC00343-209ENST00000601607 ARHGEF40Q8TER5 1519 aa11.97□□□□□ -0.49
LINC00343-209ENST00000601607 VEGFBP49765 207 aa11.97□□□□□ -0.49
LINC00343-209ENST00000601607 RNF135Q8IUD6 432 aa11.97□□□□□ -0.49
LINC00343-209ENST00000601607 CCDC85AQ96PX6 553 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-209ENST00000601607 RELBQ01201 579 aa11.96□□□□□ -0.49
LINC00343-209ENST00000601607 PHTF2Q8N3S3 785 aa11.96□□□□□ -0.49
LINC00343-209ENST00000601607 GTF3C3Q9Y5Q9 886 aa11.96□□□□□ -0.49
LINC00343-209ENST00000601607 YEATS2Q9ULM3 1422 aa11.95□□□□□ -0.5
LINC00343-209ENST00000601607 ADH1AP07327 375 aa11.95□□□□□ -0.5
LINC00343-209ENST00000601607 SCTRP47872 440 aa11.95□□□□□ -0.5
LINC00343-209ENST00000601607 MLECQ14165 292 aa11.95□□□□□ -0.5
LINC00343-209ENST00000601607 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
LINC00343-209ENST00000601607 ALG2Q9H553 416 aa11.95□□□□□ -0.5
LINC00343-209ENST00000601607 ATP10BO94823 1461 aa11.95□□□□□ -0.5
LINC00343-209ENST00000601607 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
LINC00343-209ENST00000601607 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
LINC00343-209ENST00000601607 ABCA9Q8IUA7 1624 aa11.94□□□□□ -0.5
LINC00343-209ENST00000601607 A6NJR5 290 aa11.94□□□□□ -0.5
LINC00343-209ENST00000601607 MAN1A2O60476 641 aa11.94□□□□□ -0.5
LINC00343-209ENST00000601607 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
LINC00343-209ENST00000601607 TSGA10IPQ3SY00 556 aa11.94□□□□□ -0.5
LINC00343-209ENST00000601607 CC2D2BQ6DHV5 1058 aa11.94□□□□□ -0.5
LINC00343-209ENST00000601607 CDCA7Q9BWT1 371 aaPredicted RBP11.94□□□□□ -0.5
LINC00343-209ENST00000601607 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
LINC00343-209ENST00000601607 VSIG8P0DPA2 414 aa11.93□□□□□ -0.5
LINC00343-209ENST00000601607 ESF1Q9H501 851 aaKnown RBP11.93□□□□□ -0.5
LINC00343-209ENST00000601607 DOLKQ9UPQ8 538 aa11.93□□□□□ -0.5
LINC00343-209ENST00000601607 FANCAO15360 1455 aa11.93□□□□□ -0.5
LINC00343-209ENST00000601607 DENND4BO75064 1496 aaPredicted RBP11.92□□□□□ -0.5
LINC00343-209ENST00000601607 ZNF395Q9H8N7 513 aaPredicted RBP11.92□□□□□ -0.5
LINC00343-209ENST00000601607 AKNAQ7Z591 1439 aa11.92□□□□□ -0.5
LINC00343-209ENST00000601607 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
LINC00343-209ENST00000601607 SPINT1O43278 529 aa11.91□□□□□ -0.5
LINC00343-209ENST00000601607 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
LINC00343-209ENST00000601607 PTGIRP43119 386 aa11.9□□□□□ -0.5
LINC00343-209ENST00000601607 CEBPAP49715 358 aaPredicted RBP11.9□□□□□ -0.5
LINC00343-209ENST00000601607 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
LINC00343-209ENST00000601607 KDF1Q8NAX2 398 aaPredicted RBP11.9□□□□□ -0.5
LINC00343-209ENST00000601607 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
LINC00343-209ENST00000601607 SOBPA7XYQ1 873 aa11.89□□□□□ -0.51
LINC00343-209ENST00000601607 ATP5J2-PTCD1G3V325 749 aa11.89□□□□□ -0.51
LINC00343-209ENST00000601607 MYCP01106 439 aaPredicted RBP11.89□□□□□ -0.51
LINC00343-209ENST00000601607 INSM2Q96T92 566 aaPredicted RBP11.89□□□□□ -0.51
LINC00343-209ENST00000601607 CHIC2Q9UKJ5 165 aa11.89□□□□□ -0.51
LINC00343-209ENST00000601607 SOS2Q07890 1332 aaPredicted RBP11.88□□□□□ -0.51
LINC00343-209ENST00000601607 LORP23490 312 aaPredicted RBP11.88□□□□□ -0.51
LINC00343-209ENST00000601607 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
LINC00343-209ENST00000601607 PLPP7Q8NBV4 271 aa11.88□□□□□ -0.51
LINC00343-209ENST00000601607 OSBPL3Q9H4L5 887 aa11.88□□□□□ -0.51
LINC00343-209ENST00000601607 TTC37Q6PGP7 1564 aa11.88□□□□□ -0.51
LINC00343-209ENST00000601607 SIGLEC1Q9BZZ2 1709 aa11.87□□□□□ -0.51
LINC00343-209ENST00000601607 TTLL8A6PVC2 850 aa11.87□□□□□ -0.51
LINC00343-209ENST00000601607 CYP2U1Q7Z449 544 aa11.87□□□□□ -0.51
LINC00343-209ENST00000601607 POLMQ9NP87 494 aaPredicted RBP11.87□□□□□ -0.51
LINC00343-209ENST00000601607 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
LINC00343-209ENST00000601607 TRAK2O60296 914 aa11.86□□□□□ -0.51
LINC00343-209ENST00000601607 SKIP12755 728 aa11.86□□□□□ -0.51
LINC00343-209ENST00000601607 CTSOP43234 321 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms