RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 FAM208AQ9UK61 1670 aaKnown RBP19.2■□□□□ 0.66
HIF3A-218ENST00000600383 COL5A2P05997 1499 aaPredicted RBP19.2■□□□□ 0.66
HIF3A-218ENST00000600383 CYP27B1O15528 508 aa19.2■□□□□ 0.66
HIF3A-218ENST00000600383 HDGFL1Q5TGJ6 251 aa19.2■□□□□ 0.66
HIF3A-218ENST00000600383 PTPRCP08575 1304 aa19.2■□□□□ 0.66
HIF3A-218ENST00000600383 NFATC2IPQ8NCF5 419 aa19.19■□□□□ 0.66
HIF3A-218ENST00000600383 SLC4A10Q6U841 1118 aa19.19■□□□□ 0.66
HIF3A-218ENST00000600383 CHMP4BQ9H444 224 aaKnown RBP19.19■□□□□ 0.66
HIF3A-218ENST00000600383 C1orf115Q9H7X2 142 aa19.19■□□□□ 0.66
HIF3A-218ENST00000600383 F6X3S4 739 aa19.18■□□□□ 0.66
HIF3A-218ENST00000600383 TOM1O60784 492 aa19.18■□□□□ 0.66
HIF3A-218ENST00000600383 CARD10Q9BWT7 1032 aa19.18■□□□□ 0.66
HIF3A-218ENST00000600383 ABCA3Q99758 1704 aa19.17■□□□□ 0.66
HIF3A-218ENST00000600383 FKBP5Q13451 457 aaPredicted RBP19.17■□□□□ 0.66
HIF3A-218ENST00000600383 ZCRB1Q8TBF4 217 aaKnown RBP19.17■□□□□ 0.66
HIF3A-218ENST00000600383 FLIIQ13045 1269 aa19.16■□□□□ 0.66
HIF3A-218ENST00000600383 SLC39A6Q13433 755 aa19.16■□□□□ 0.66
HIF3A-218ENST00000600383 SLC52A2Q9HAB3 445 aa19.16■□□□□ 0.66
HIF3A-218ENST00000600383 SOS1Q07889 1333 aaPredicted RBP19.16■□□□□ 0.66
HIF3A-218ENST00000600383 IL2RBP14784 551 aa19.16■□□□□ 0.66
HIF3A-218ENST00000600383 INTS3Q68E01 1043 aaKnown RBP19.16■□□□□ 0.66
HIF3A-218ENST00000600383 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
HIF3A-218ENST00000600383 DDX54Q8TDD1 881 aaKnown RBP19.15■□□□□ 0.66
HIF3A-218ENST00000600383 ADAMTS2O95450 1211 aa19.15■□□□□ 0.66
HIF3A-218ENST00000600383 KDM6AO15550 1401 aaPredicted RBP19.14■□□□□ 0.66
HIF3A-218ENST00000600383 PHAXQ9H814 394 aaKnown RBP19.14■□□□□ 0.65
HIF3A-218ENST00000600383 VIRMAQ69YN4 1812 aaKnown RBP19.14■□□□□ 0.65
HIF3A-218ENST00000600383 OVOS2A0A0G2JMS6 1433 aa19.14■□□□□ 0.65
HIF3A-218ENST00000600383 RGS12O14924 1447 aa19.14■□□□□ 0.65
HIF3A-218ENST00000600383 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
HIF3A-218ENST00000600383 HDAC1Q13547 482 aaPredicted RBP19.13■□□□□ 0.65
HIF3A-218ENST00000600383 CHPF2Q9P2E5 772 aa19.13■□□□□ 0.65
HIF3A-218ENST00000600383 PRAMEF22A3QJZ6 481 aa19.13■□□□□ 0.65
HIF3A-218ENST00000600383 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
HIF3A-218ENST00000600383 CABP4P57796 275 aa19.13■□□□□ 0.65
HIF3A-218ENST00000600383 ZNF790Q6PG37 636 aa19.13■□□□□ 0.65
HIF3A-218ENST00000600383 AHDC1Q5TGY3 1603 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-218ENST00000600383 NUTM2BA6NNL0 878 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-218ENST00000600383 NUTM2EB1AL46 878 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-218ENST00000600383 GIGYF1O75420 1035 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-218ENST00000600383 HOXB7P09629 217 aa19.12■□□□□ 0.65
HIF3A-218ENST00000600383 NUTM2AQ8IVF1 878 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-218ENST00000600383 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
HIF3A-218ENST00000600383 PCDH11XQ9BZA7 1347 aa19.12■□□□□ 0.65
HIF3A-218ENST00000600383 PCDH11YQ9BZA8 1340 aa19.12■□□□□ 0.65
HIF3A-218ENST00000600383 ANXA1P04083 346 aa19.12■□□□□ 0.65
HIF3A-218ENST00000600383 PDE4AP27815 886 aa19.12■□□□□ 0.65
HIF3A-218ENST00000600383 CHMP4AQ9BY43 222 aa19.11■□□□□ 0.65
HIF3A-218ENST00000600383 KDM3BQ7LBC6 1761 aa19.11■□□□□ 0.65
HIF3A-218ENST00000600383 CCT4P50991 539 aaKnown RBP19.09■□□□□ 0.65
HIF3A-218ENST00000600383 TTC5Q8N0Z6 440 aa19.09■□□□□ 0.65
HIF3A-218ENST00000600383 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
HIF3A-218ENST00000600383 MEIS3Q99687 375 aa19.09■□□□□ 0.65
HIF3A-218ENST00000600383 PLEKHG2Q9H7P9 1386 aa19.08■□□□□ 0.64
HIF3A-218ENST00000600383 SCN11AQ9UI33 1791 aa19.08■□□□□ 0.64
HIF3A-218ENST00000600383 PHLPP1O60346 1717 aa19.07■□□□□ 0.64
HIF3A-218ENST00000600383 DBF4Q9UBU7 674 aaPredicted RBP19.07■□□□□ 0.64
HIF3A-218ENST00000600383 SIRT2Q8IXJ6 389 aa19.07■□□□□ 0.64
HIF3A-218ENST00000600383 ZNF496Q96IT1 587 aaPredicted RBP19.07■□□□□ 0.64
HIF3A-218ENST00000600383 PKD1L3Q7Z443 1732 aa19.07■□□□□ 0.64
HIF3A-218ENST00000600383 BACH2Q9BYV9 841 aa19.06■□□□□ 0.64
HIF3A-218ENST00000600383 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
HIF3A-218ENST00000600383 ADAMTS7Q9UKP4 1686 aa19.06■□□□□ 0.64
HIF3A-218ENST00000600383 SMC5Q8IY18 1101 aa19.06■□□□□ 0.64
HIF3A-218ENST00000600383 PROSER3Q2NL68 480 aa19.05■□□□□ 0.64
HIF3A-218ENST00000600383 SIPA1L3O60292 1781 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-218ENST00000600383 PARP4Q9UKK3 1724 aaKnown RBP19.05■□□□□ 0.64
HIF3A-218ENST00000600383 CACNA1FO60840 1977 aa19.04■□□□□ 0.64
HIF3A-218ENST00000600383 PI4KAP2A4QPH2 592 aa19.04■□□□□ 0.64
HIF3A-218ENST00000600383 PI4KAP1Q8N8J0 262 aa19.04■□□□□ 0.64
HIF3A-218ENST00000600383 COL14A1Q05707 1796 aaKnown RBP19.03■□□□□ 0.64
HIF3A-218ENST00000600383 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
HIF3A-218ENST00000600383 FMNL2Q96PY5 1086 aa19.03■□□□□ 0.64
HIF3A-218ENST00000600383 BCL11AQ9H165 835 aa19.03■□□□□ 0.64
HIF3A-218ENST00000600383 COL16A1Q07092 1604 aaPredicted RBP19.02■□□□□ 0.64
HIF3A-218ENST00000600383 AIMP1Q12904 312 aaKnown RBP19.02■□□□□ 0.64
HIF3A-218ENST00000600383 NKX1-1Q15270 411 aaPredicted RBP19.02■□□□□ 0.64
HIF3A-218ENST00000600383 ANKRD45Q5TZF3 282 aa19.02■□□□□ 0.64
HIF3A-218ENST00000600383 USP16Q9Y5T5 823 aa19.02■□□□□ 0.64
HIF3A-218ENST00000600383 COL22A1Q8NFW1 1626 aaPredicted RBP19.02■□□□□ 0.64
HIF3A-218ENST00000600383 SNRPA1P09661 255 aaKnown RBP19.01■□□□□ 0.63
HIF3A-218ENST00000600383 MYL6BP14649 208 aa19.01■□□□□ 0.63
HIF3A-218ENST00000600383 FAM161AQ3B820 660 aa19.01■□□□□ 0.63
HIF3A-218ENST00000600383 RPAP2Q8IXW5 612 aaPredicted RBP19.01■□□□□ 0.63
HIF3A-218ENST00000600383 GCC1Q96CN9 775 aa19.01■□□□□ 0.63
HIF3A-218ENST00000600383 LNPKQ9C0E8 428 aa19.01■□□□□ 0.63
HIF3A-218ENST00000600383 HYPKQ9NX55 129 aa19.01■□□□□ 0.63
HIF3A-218ENST00000600383 CEP85Q6P2H3 762 aa19■□□□□ 0.63
HIF3A-218ENST00000600383 DNAAF4Q8WXU2 420 aa19■□□□□ 0.63
HIF3A-218ENST00000600383 PIP4K2AP48426 406 aaPredicted RBP19■□□□□ 0.63
HIF3A-218ENST00000600383 NUCB1Q02818 461 aa19■□□□□ 0.63
HIF3A-218ENST00000600383 ANKRD44Q8N8A2 993 aa19■□□□□ 0.63
HIF3A-218ENST00000600383 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
HIF3A-218ENST00000600383 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
HIF3A-218ENST00000600383 CCDC9Q9Y3X0 531 aaKnown RBP19■□□□□ 0.63
HIF3A-218ENST00000600383 EXOC5O00471 708 aa18.99■□□□□ 0.63
HIF3A-218ENST00000600383 PTCD1O75127 700 aaKnown RBP18.99■□□□□ 0.63
HIF3A-218ENST00000600383 GNAI2P04899 355 aa18.99■□□□□ 0.63
HIF3A-218ENST00000600383 GNAI3P08754 354 aa18.98■□□□□ 0.63
HIF3A-218ENST00000600383 PDIA6Q15084 440 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms