RNA–Protein interactions for RNA: ENST00000600229.5

CRB3-204, Transcript of crumbs 3, cell polarity complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRB3, Length 1,078 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3-204ENST00000600229 U2AF1L5P0DN76 240 aaPredicted RBP22.92■■□□□ 1.26
CRB3-204ENST00000600229 SIK1P57059 783 aa22.92■■□□□ 1.26
CRB3-204ENST00000600229 CABP4P57796 275 aa22.92■■□□□ 1.26
CRB3-204ENST00000600229 U2AF1Q01081 240 aaKnown RBP eCLIP22.92■■□□□ 1.26
CRB3-204ENST00000600229 COL24A1Q17RW2 1714 aa22.91■■□□□ 1.26
CRB3-204ENST00000600229 PNPLA7Q6ZV29 1317 aa22.91■■□□□ 1.26
CRB3-204ENST00000600229 GAS2L2Q8NHY3 880 aa22.91■■□□□ 1.26
CRB3-204ENST00000600229 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
CRB3-204ENST00000600229 RNMTO43148 476 aaKnown RBP22.9■■□□□ 1.26
CRB3-204ENST00000600229 LGR6Q9HBX8 967 aa22.9■■□□□ 1.26
CRB3-204ENST00000600229 SPON1Q9HCB6 807 aa22.9■■□□□ 1.26
CRB3-204ENST00000600229 TJP1Q07157 1748 aa22.89■■□□□ 1.26
CRB3-204ENST00000600229 PHACTR3Q96KR7 559 aa22.89■■□□□ 1.25
CRB3-204ENST00000600229 UBR2Q8IWV8 1755 aa22.89■■□□□ 1.25
CRB3-204ENST00000600229 FCHSD2O94868 740 aa22.88■■□□□ 1.25
CRB3-204ENST00000600229 ZBTB7AO95365 584 aa22.88■■□□□ 1.25
CRB3-204ENST00000600229 NFATC2IPQ8NCF5 419 aa22.88■■□□□ 1.25
CRB3-204ENST00000600229 SLC52A2Q9HAB3 445 aa22.88■■□□□ 1.25
CRB3-204ENST00000600229 TFCP2L1Q9NZI6 479 aa22.88■■□□□ 1.25
CRB3-204ENST00000600229 ITPK1Q13572 414 aa22.87■■□□□ 1.25
CRB3-204ENST00000600229 HMGB2P26583 209 aaKnown RBP22.86■■□□□ 1.25
CRB3-204ENST00000600229 LINC00116Q8NCU8 138 aa22.86■■□□□ 1.25
CRB3-204ENST00000600229 SLC4A9Q96Q91 983 aa22.86■■□□□ 1.25
CRB3-204ENST00000600229 MTFR1LQ9H019 292 aa22.86■■□□□ 1.25
CRB3-204ENST00000600229 KCPQ6ZWJ8 1503 aa22.86■■□□□ 1.25
CRB3-204ENST00000600229 DLG5Q8TDM6 1919 aa22.85■■□□□ 1.25
CRB3-204ENST00000600229 GNAT3A8MTJ3 354 aa22.85■■□□□ 1.25
CRB3-204ENST00000600229 PRKRIP1Q9H875 184 aaPredicted RBP22.85■■□□□ 1.25
CRB3-204ENST00000600229 CEMIPQ8WUJ3 1361 aa22.85■■□□□ 1.25
CRB3-204ENST00000600229 ZNF316A6NFI3 1004 aaPredicted RBP22.84■■□□□ 1.25
CRB3-204ENST00000600229 ATP6V1AP38606 617 aa22.84■■□□□ 1.25
CRB3-204ENST00000600229 PTGER2P43116 358 aa22.84■■□□□ 1.25
CRB3-204ENST00000600229 MYH14Q7Z406 1995 aaKnown RBP22.83■■□□□ 1.24
CRB3-204ENST00000600229 AMIGO3Q86WK7 504 aa22.82■■□□□ 1.24
CRB3-204ENST00000600229 IL17REQ8NFR9 667 aa22.82■■□□□ 1.24
CRB3-204ENST00000600229 AK7Q96M32 723 aa22.82■■□□□ 1.24
CRB3-204ENST00000600229 SGIP1Q9BQI5 828 aa22.82■■□□□ 1.24
CRB3-204ENST00000600229 RBM42Q9BTD8 480 aaKnown RBP22.82■■□□□ 1.24
CRB3-204ENST00000600229 SLC16A10Q8TF71 515 aa22.81■■□□□ 1.24
CRB3-204ENST00000600229 ATF5Q9Y2D1 282 aaPredicted RBP22.81■■□□□ 1.24
CRB3-204ENST00000600229 COL23A1Q86Y22 540 aaPredicted RBP22.8■■□□□ 1.24
CRB3-204ENST00000600229 PLEKHF1Q96S99 279 aa22.8■■□□□ 1.24
CRB3-204ENST00000600229 PTCD1O75127 700 aaKnown RBP22.79■■□□□ 1.24
CRB3-204ENST00000600229 C4AP0C0L4 1744 aa22.78■■□□□ 1.24
CRB3-204ENST00000600229 CNTNAP4Q9C0A0 1308 aa22.78■■□□□ 1.24
CRB3-204ENST00000600229 SLC39A6Q13433 755 aa22.77■■□□□ 1.24
CRB3-204ENST00000600229 FLAD1Q8NFF5 587 aa22.77■■□□□ 1.24
CRB3-204ENST00000600229 GNPATO15228 680 aa22.76■■□□□ 1.23
CRB3-204ENST00000600229 SSFA2P28290 1259 aa22.76■■□□□ 1.23
CRB3-204ENST00000600229 TEFQ10587 303 aa22.76■■□□□ 1.23
CRB3-204ENST00000600229 PPP1R1BQ9UD71 204 aaPredicted RBP22.76■■□□□ 1.23
CRB3-204ENST00000600229 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.75■■□□□ 1.23
CRB3-204ENST00000600229 PHF14O94880 888 aa22.74■■□□□ 1.23
CRB3-204ENST00000600229 RC3H1Q5TC82 1133 aaKnown RBP22.74■■□□□ 1.23
CRB3-204ENST00000600229 SMIM5Q71RC9 77 aa22.74■■□□□ 1.23
CRB3-204ENST00000600229 MSH5O43196 834 aa22.72■■□□□ 1.23
CRB3-204ENST00000600229 HTATSF1O43719 755 aaKnown RBP22.72■■□□□ 1.23
CRB3-204ENST00000600229 NEFMP07197 916 aa22.72■■□□□ 1.23
CRB3-204ENST00000600229 MCM10Q7L590 875 aa22.72■■□□□ 1.23
CRB3-204ENST00000600229 RTF1Q92541 710 aaKnown RBP22.72■■□□□ 1.23
CRB3-204ENST00000600229 NFE2L2Q16236 605 aa22.71■■□□□ 1.23
CRB3-204ENST00000600229 ZNF790Q6PG37 636 aa22.71■■□□□ 1.23
CRB3-204ENST00000600229 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
CRB3-204ENST00000600229 MAPK8IP3Q9UPT6 1336 aa22.71■■□□□ 1.23
CRB3-204ENST00000600229 CRKLP46109 303 aaKnown RBP22.7■■□□□ 1.22
CRB3-204ENST00000600229 DCTN1Q14203 1278 aa22.7■■□□□ 1.22
CRB3-204ENST00000600229 DNAJC10Q8IXB1 793 aa22.7■■□□□ 1.22
CRB3-204ENST00000600229 KDM3BQ7LBC6 1761 aa22.7■■□□□ 1.22
CRB3-204ENST00000600229 MSL1Q68DK7 614 aa22.69■■□□□ 1.22
CRB3-204ENST00000600229 TTC5Q8N0Z6 440 aa22.69■■□□□ 1.22
CRB3-204ENST00000600229 VSIG10Q8N0Z9 540 aa22.69■■□□□ 1.22
CRB3-204ENST00000600229 ARXQ96QS3 562 aa22.69■■□□□ 1.22
CRB3-204ENST00000600229 RTCBQ9Y3I0 505 aaKnown RBP22.69■■□□□ 1.22
CRB3-204ENST00000600229 HEG1Q9ULI3 1381 aa22.68■■□□□ 1.22
CRB3-204ENST00000600229 ZNF496Q96IT1 587 aaPredicted RBP22.68■■□□□ 1.22
CRB3-204ENST00000600229 RPS6KA4O75676 772 aa22.67■■□□□ 1.22
CRB3-204ENST00000600229 ADRA2BP18089 450 aa22.67■■□□□ 1.22
CRB3-204ENST00000600229 POLD1P28340 1107 aa22.67■■□□□ 1.22
CRB3-204ENST00000600229 WDR43Q15061 677 aaKnown RBP eCLIP22.67■■□□□ 1.22
CRB3-204ENST00000600229 BTBD11A6QL63 1104 aa22.66■■□□□ 1.22
CRB3-204ENST00000600229 CYP19A1P11511 503 aaPredicted RBP22.66■■□□□ 1.22
CRB3-204ENST00000600229 INTS5Q6P9B9 1019 aaKnown RBP22.66■■□□□ 1.22
CRB3-204ENST00000600229 FHDC1Q9C0D6 1143 aaPredicted RBP22.66■■□□□ 1.22
CRB3-204ENST00000600229 CCDC87Q9NVE4 849 aa22.65■■□□□ 1.22
CRB3-204ENST00000600229 KCNQ3O43525 872 aa22.64■■□□□ 1.21
CRB3-204ENST00000600229 LAMB4A4D0S4 1761 aa22.63■■□□□ 1.21
CRB3-204ENST00000600229 TRAPPC3LQ5T215 181 aa22.63■■□□□ 1.21
CRB3-204ENST00000600229 ARHGEF1Q92888 912 aaKnown RBP22.63■■□□□ 1.21
CRB3-204ENST00000600229 FMNL2Q96PY5 1086 aa22.63■■□□□ 1.21
CRB3-204ENST00000600229 ADAMTS8Q9UP79 889 aa22.63■■□□□ 1.21
CRB3-204ENST00000600229 SOS1Q07889 1333 aaPredicted RBP22.62■■□□□ 1.21
CRB3-204ENST00000600229 CCDC146Q8IYE0 955 aa22.62■■□□□ 1.21
CRB3-204ENST00000600229 SYT17Q9BSW7 474 aa22.62■■□□□ 1.21
CRB3-204ENST00000600229 ZBTB1Q9Y2K1 713 aa22.62■■□□□ 1.21
CRB3-204ENST00000600229 TMPOP42166 694 aaKnown RBP22.61■■□□□ 1.21
CRB3-204ENST00000600229 THUMPD2Q9BTF0 503 aaKnown RBP22.61■■□□□ 1.21
CRB3-204ENST00000600229 GOLGB1Q14789 3259 aaKnown RBP22.6■■□□□ 1.21
CRB3-204ENST00000600229 UTRNP46939 3433 aa22.6■■□□□ 1.21
CRB3-204ENST00000600229 TAF7Q15545 349 aaPredicted RBP22.6■■□□□ 1.21
CRB3-204ENST00000600229 RUNDC1Q96C34 613 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms