RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 E9PSI1 815 aa16.01■□□□□ 0.15
TGFB1-204ENST00000600196 PLSCR1O15162 318 aa16.01■□□□□ 0.15
TGFB1-204ENST00000600196 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
TGFB1-204ENST00000600196 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
TGFB1-204ENST00000600196 PIGBQ92521 554 aa16■□□□□ 0.15
TGFB1-204ENST00000600196 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
TGFB1-204ENST00000600196 DCTN1Q14203 1278 aa15.98■□□□□ 0.15
TGFB1-204ENST00000600196 ZNF790Q6PG37 636 aa15.98■□□□□ 0.15
TGFB1-204ENST00000600196 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
TGFB1-204ENST00000600196 TEX13AQ9BXU3 409 aaPredicted RBP15.98■□□□□ 0.15
TGFB1-204ENST00000600196 HOXB7P09629 217 aa15.97■□□□□ 0.15
TGFB1-204ENST00000600196 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
TGFB1-204ENST00000600196 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
TGFB1-204ENST00000600196 TTC5Q8N0Z6 440 aa15.97■□□□□ 0.15
TGFB1-204ENST00000600196 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
TGFB1-204ENST00000600196 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
TGFB1-204ENST00000600196 SYTL4Q96C24 671 aaPredicted RBP15.96■□□□□ 0.15
TGFB1-204ENST00000600196 TSPYL4Q9UJ04 414 aa15.96■□□□□ 0.15
TGFB1-204ENST00000600196 SBF2Q86WG5 1849 aa15.96■□□□□ 0.14
TGFB1-204ENST00000600196 KCNQ2O43526 872 aa15.95■□□□□ 0.14
TGFB1-204ENST00000600196 SF3B2Q13435 895 aaKnown RBP15.95■□□□□ 0.14
TGFB1-204ENST00000600196 SLC27A3Q5K4L6 730 aa15.95■□□□□ 0.14
TGFB1-204ENST00000600196 ACSBG1Q96GR2 724 aa15.95■□□□□ 0.14
TGFB1-204ENST00000600196 FMNL2Q96PY5 1086 aa15.95■□□□□ 0.14
TGFB1-204ENST00000600196 THUMPD2Q9BTF0 503 aaKnown RBP15.95■□□□□ 0.14
TGFB1-204ENST00000600196 ATG3Q9NT62 314 aa15.95■□□□□ 0.14
TGFB1-204ENST00000600196 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
TGFB1-204ENST00000600196 KAT6BQ8WYB5 2073 aa15.95■□□□□ 0.14
TGFB1-204ENST00000600196 TRIM37O94972 964 aa15.94■□□□□ 0.14
TGFB1-204ENST00000600196 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
TGFB1-204ENST00000600196 SIPA1L3O60292 1781 aaPredicted RBP15.94■□□□□ 0.14
TGFB1-204ENST00000600196 ITGB4P16144 1822 aa15.94■□□□□ 0.14
TGFB1-204ENST00000600196 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
TGFB1-204ENST00000600196 MBIPQ9NS73 344 aa15.93■□□□□ 0.14
TGFB1-204ENST00000600196 SALL2Q9Y467 1007 aaPredicted RBP15.93■□□□□ 0.14
TGFB1-204ENST00000600196 DOT1LQ8TEK3 1739 aa15.93■□□□□ 0.14
TGFB1-204ENST00000600196 TOGARAM1Q9Y4F4 1720 aa15.93■□□□□ 0.14
TGFB1-204ENST00000600196 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
TGFB1-204ENST00000600196 SNRPA1P09661 255 aaKnown RBP15.92■□□□□ 0.14
TGFB1-204ENST00000600196 ASAP1Q9ULH1 1129 aa15.92■□□□□ 0.14
TGFB1-204ENST00000600196 ZNF831Q5JPB2 1677 aa15.92■□□□□ 0.14
TGFB1-204ENST00000600196 BAG6P46379 1132 aa15.91■□□□□ 0.14
TGFB1-204ENST00000600196 PALLDQ8WX93 1383 aa15.9■□□□□ 0.14
TGFB1-204ENST00000600196 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
TGFB1-204ENST00000600196 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
TGFB1-204ENST00000600196 APBA3O96018 575 aa15.9■□□□□ 0.14
TGFB1-204ENST00000600196 SIK1P57059 783 aa15.9■□□□□ 0.14
TGFB1-204ENST00000600196 DUSP27Q5VZP5 1158 aa15.9■□□□□ 0.14
TGFB1-204ENST00000600196 ERBB4Q15303 1308 aa15.9■□□□□ 0.14
TGFB1-204ENST00000600196 FANCIQ9NVI1 1328 aa15.9■□□□□ 0.14
TGFB1-204ENST00000600196 ZNF496Q96IT1 587 aaPredicted RBP15.89■□□□□ 0.13
TGFB1-204ENST00000600196 LAS1LQ9Y4W2 734 aaKnown RBP15.89■□□□□ 0.13
TGFB1-204ENST00000600196 RGPD3A6NKT7 1758 aaPredicted RBP15.89■□□□□ 0.13
TGFB1-204ENST00000600196 RGPD4Q7Z3J3 1758 aa15.89■□□□□ 0.13
TGFB1-204ENST00000600196 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
TGFB1-204ENST00000600196 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
TGFB1-204ENST00000600196 STARD3NLO95772 234 aa15.88■□□□□ 0.13
TGFB1-204ENST00000600196 SLC39A6Q13433 755 aa15.88■□□□□ 0.13
TGFB1-204ENST00000600196 CICQ96RK0 1608 aaPredicted RBP15.87■□□□□ 0.13
TGFB1-204ENST00000600196 RC3H1Q5TC82 1133 aaKnown RBP15.87■□□□□ 0.13
TGFB1-204ENST00000600196 UPF1Q92900 1129 aaKnown RBP eCLIP15.87■□□□□ 0.13
TGFB1-204ENST00000600196 CAMKK2Q96RR4 588 aa15.87■□□□□ 0.13
TGFB1-204ENST00000600196 SPINK5Q9NQ38 1064 aaPredicted RBP15.87■□□□□ 0.13
TGFB1-204ENST00000600196 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
TGFB1-204ENST00000600196 BTAF1O14981 1849 aa15.87■□□□□ 0.13
TGFB1-204ENST00000600196 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
TGFB1-204ENST00000600196 KCPQ6ZWJ8 1503 aa15.86■□□□□ 0.13
TGFB1-204ENST00000600196 CDCA7LQ96GN5 454 aa15.86■□□□□ 0.13
TGFB1-204ENST00000600196 KCNQ3O43525 872 aa15.85■□□□□ 0.13
TGFB1-204ENST00000600196 ATP6V1AP38606 617 aa15.85■□□□□ 0.13
TGFB1-204ENST00000600196 TXNRD1Q16881 649 aa15.85■□□□□ 0.13
TGFB1-204ENST00000600196 PTF1AQ7RTS3 328 aa15.85■□□□□ 0.13
TGFB1-204ENST00000600196 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
TGFB1-204ENST00000600196 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
TGFB1-204ENST00000600196 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
TGFB1-204ENST00000600196 VAMP4O75379 141 aa15.84■□□□□ 0.13
TGFB1-204ENST00000600196 TWISTNBQ3B726 338 aaPredicted RBP15.84■□□□□ 0.13
TGFB1-204ENST00000600196 CCDC30Q5VVM6 783 aa15.84■□□□□ 0.13
TGFB1-204ENST00000600196 TSR2Q969E8 191 aaKnown RBP15.84■□□□□ 0.13
TGFB1-204ENST00000600196 LY75O60449 1722 aa15.84■□□□□ 0.13
TGFB1-204ENST00000600196 RGL2O15211 777 aa15.83■□□□□ 0.12
TGFB1-204ENST00000600196 BRPF1P55201 1214 aaPredicted RBP15.83■□□□□ 0.12
TGFB1-204ENST00000600196 EXOSC9Q06265 439 aaKnown RBP15.83■□□□□ 0.12
TGFB1-204ENST00000600196 ALDH1L2Q3SY69 923 aa15.83■□□□□ 0.12
TGFB1-204ENST00000600196 ILDR2Q71H61 639 aa15.83■□□□□ 0.12
TGFB1-204ENST00000600196 CNTNAP4Q9C0A0 1308 aa15.83■□□□□ 0.12
TGFB1-204ENST00000600196 TNS1Q9HBL0 1735 aaKnown RBP15.82■□□□□ 0.12
TGFB1-204ENST00000600196 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
TGFB1-204ENST00000600196 PROM2Q8N271 834 aa15.82■□□□□ 0.12
TGFB1-204ENST00000600196 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
TGFB1-204ENST00000600196 SLC4A9Q96Q91 983 aa15.82■□□□□ 0.12
TGFB1-204ENST00000600196 DBF4Q9UBU7 674 aaPredicted RBP15.82■□□□□ 0.12
TGFB1-204ENST00000600196 EP400Q96L91 3159 aa15.81■□□□□ 0.12
TGFB1-204ENST00000600196 SENP3-EIF4A1A0A087X0R7 540 aa15.8■□□□□ 0.12
TGFB1-204ENST00000600196 ADRA2BP18089 450 aa15.8■□□□□ 0.12
TGFB1-204ENST00000600196 FLAD1Q8NFF5 587 aa15.8■□□□□ 0.12
TGFB1-204ENST00000600196 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
TGFB1-204ENST00000600196 DDX21Q9NR30 783 aaKnown RBP eCLIP15.8■□□□□ 0.12
TGFB1-204ENST00000600196 USP16Q9Y5T5 823 aa15.8■□□□□ 0.12
TGFB1-204ENST00000600196 IL6STP40189 918 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms