RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 ATG3Q9NT62 314 aa10.72□□□□□ -0.69
CHMP2A-205ENST00000600006 ASAP1Q9ULH1 1129 aa10.72□□□□□ -0.69
CHMP2A-205ENST00000600006 PTGER2P43116 358 aa10.71□□□□□ -0.69
CHMP2A-205ENST00000600006 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
CHMP2A-205ENST00000600006 MAP3K5Q99683 1374 aa10.7□□□□□ -0.7
CHMP2A-205ENST00000600006 CABP4P57796 275 aa10.7□□□□□ -0.7
CHMP2A-205ENST00000600006 ITPK1Q13572 414 aa10.7□□□□□ -0.7
CHMP2A-205ENST00000600006 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
CHMP2A-205ENST00000600006 RSPH6AQ9H0K4 717 aa10.7□□□□□ -0.7
CHMP2A-205ENST00000600006 TFCP2L1Q9NZI6 479 aa10.7□□□□□ -0.7
CHMP2A-205ENST00000600006 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
CHMP2A-205ENST00000600006 C4AP0C0L4 1744 aa10.7□□□□□ -0.7
CHMP2A-205ENST00000600006 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
CHMP2A-205ENST00000600006 KCPQ6ZWJ8 1503 aa10.69□□□□□ -0.7
CHMP2A-205ENST00000600006 DLG5Q8TDM6 1919 aa10.69□□□□□ -0.7
CHMP2A-205ENST00000600006 RNMTO43148 476 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-205ENST00000600006 PRKAR2BP31323 418 aa10.69□□□□□ -0.7
CHMP2A-205ENST00000600006 DDX10Q13206 875 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-205ENST00000600006 LINC00116Q8NCU8 138 aa10.69□□□□□ -0.7
CHMP2A-205ENST00000600006 GAS2L2Q8NHY3 880 aa10.69□□□□□ -0.7
CHMP2A-205ENST00000600006 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 ATP6V1AP38606 617 aa10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 RALBP1Q15311 655 aa10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 COL23A1Q86Y22 540 aaPredicted RBP10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 NFATC2IPQ8NCF5 419 aa10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 SLC52A2Q9HAB3 445 aa10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 LGR6Q9HBX8 967 aa10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 PPP1R1BQ9UD71 204 aaPredicted RBP10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
CHMP2A-205ENST00000600006 FCHSD2O94868 740 aa10.67□□□□□ -0.7
CHMP2A-205ENST00000600006 U2AF1L5P0DN76 240 aaPredicted RBP10.67□□□□□ -0.7
CHMP2A-205ENST00000600006 U2AF1Q01081 240 aaKnown RBP eCLIP10.67□□□□□ -0.7
CHMP2A-205ENST00000600006 FLAD1Q8NFF5 587 aa10.67□□□□□ -0.7
CHMP2A-205ENST00000600006 AK7Q96M32 723 aa10.67□□□□□ -0.7
CHMP2A-205ENST00000600006 CEMIPQ8WUJ3 1361 aa10.66□□□□□ -0.7
CHMP2A-205ENST00000600006 CNTNAP4Q9C0A0 1308 aa10.66□□□□□ -0.7
CHMP2A-205ENST00000600006 GNAT3A8MTJ3 354 aa10.66□□□□□ -0.7
CHMP2A-205ENST00000600006 SSFA2P28290 1259 aa10.66□□□□□ -0.7
CHMP2A-205ENST00000600006 AMIGO3Q86WK7 504 aa10.66□□□□□ -0.7
CHMP2A-205ENST00000600006 PHACTR3Q96KR7 559 aa10.66□□□□□ -0.7
CHMP2A-205ENST00000600006 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
CHMP2A-205ENST00000600006 MYBBP1AQ9BQG0 1328 aaKnown RBP10.65□□□□□ -0.7
CHMP2A-205ENST00000600006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.65□□□□□ -0.7
CHMP2A-205ENST00000600006 IL17REQ8NFR9 667 aa10.65□□□□□ -0.7
CHMP2A-205ENST00000600006 GNPATO15228 680 aa10.64□□□□□ -0.71
CHMP2A-205ENST00000600006 PTCD1O75127 700 aaKnown RBP10.64□□□□□ -0.71
CHMP2A-205ENST00000600006 RC3H1Q5TC82 1133 aaKnown RBP10.64□□□□□ -0.71
CHMP2A-205ENST00000600006 ARXQ96QS3 562 aa10.64□□□□□ -0.71
CHMP2A-205ENST00000600006 KDM3BQ7LBC6 1761 aa10.63□□□□□ -0.71
CHMP2A-205ENST00000600006 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
CHMP2A-205ENST00000600006 MSH5O43196 834 aa10.63□□□□□ -0.71
CHMP2A-205ENST00000600006 PHF14O94880 888 aa10.63□□□□□ -0.71
CHMP2A-205ENST00000600006 POLD1P28340 1107 aa10.63□□□□□ -0.71
CHMP2A-205ENST00000600006 TEFQ10587 303 aa10.63□□□□□ -0.71
CHMP2A-205ENST00000600006 FHDC1Q9C0D6 1143 aaPredicted RBP10.63□□□□□ -0.71
CHMP2A-205ENST00000600006 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
CHMP2A-205ENST00000600006 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
CHMP2A-205ENST00000600006 SMIM5Q71RC9 77 aa10.62□□□□□ -0.71
CHMP2A-205ENST00000600006 PLEKHF1Q96S99 279 aa10.62□□□□□ -0.71
CHMP2A-205ENST00000600006 SYT17Q9BSW7 474 aa10.62□□□□□ -0.71
CHMP2A-205ENST00000600006 RTCBQ9Y3I0 505 aaKnown RBP10.62□□□□□ -0.71
CHMP2A-205ENST00000600006 KIF13BQ9NQT8 1826 aa10.62□□□□□ -0.71
CHMP2A-205ENST00000600006 HTATSF1O43719 755 aaKnown RBP10.61□□□□□ -0.71
CHMP2A-205ENST00000600006 RPS6KA4O75676 772 aa10.61□□□□□ -0.71
CHMP2A-205ENST00000600006 ADRA2BP18089 450 aa10.61□□□□□ -0.71
CHMP2A-205ENST00000600006 CRKLP46109 303 aaKnown RBP10.61□□□□□ -0.71
CHMP2A-205ENST00000600006 MSL1Q68DK7 614 aa10.61□□□□□ -0.71
CHMP2A-205ENST00000600006 DNAJC10Q8IXB1 793 aa10.61□□□□□ -0.71
CHMP2A-205ENST00000600006 VSIG10Q8N0Z9 540 aa10.61□□□□□ -0.71
CHMP2A-205ENST00000600006 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
CHMP2A-205ENST00000600006 SCN7AQ01118 1682 aa10.6□□□□□ -0.71
CHMP2A-205ENST00000600006 ZNF790Q6PG37 636 aa10.6□□□□□ -0.71
CHMP2A-205ENST00000600006 KIAA1551Q9HCM1 1747 aa10.6□□□□□ -0.71
CHMP2A-205ENST00000600006 HEG1Q9ULI3 1381 aa10.6□□□□□ -0.71
CHMP2A-205ENST00000600006 NEFMP07197 916 aa10.59□□□□□ -0.71
CHMP2A-205ENST00000600006 CYP19A1P11511 503 aaPredicted RBP10.59□□□□□ -0.71
CHMP2A-205ENST00000600006 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
CHMP2A-205ENST00000600006 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-205ENST00000600006 TTC5Q8N0Z6 440 aa10.59□□□□□ -0.71
CHMP2A-205ENST00000600006 RTF1Q92541 710 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-205ENST00000600006 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-205ENST00000600006 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
CHMP2A-205ENST00000600006 SOS1Q07889 1333 aaPredicted RBP10.58□□□□□ -0.71
CHMP2A-205ENST00000600006 MAPK8IP3Q9UPT6 1336 aa10.58□□□□□ -0.71
CHMP2A-205ENST00000600006 BCORQ6W2J9 1755 aa10.58□□□□□ -0.72
CHMP2A-205ENST00000600006 DCTN1Q14203 1278 aa10.58□□□□□ -0.72
CHMP2A-205ENST00000600006 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
CHMP2A-205ENST00000600006 MCM10Q7L590 875 aa10.58□□□□□ -0.72
CHMP2A-205ENST00000600006 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-205ENST00000600006 ZNF496Q96IT1 587 aaPredicted RBP10.58□□□□□ -0.72
CHMP2A-205ENST00000600006 COL15A1P39059 1388 aa10.57□□□□□ -0.72
CHMP2A-205ENST00000600006 BTBD11A6QL63 1104 aa10.57□□□□□ -0.72
CHMP2A-205ENST00000600006 GYS1P13807 737 aa10.57□□□□□ -0.72
CHMP2A-205ENST00000600006 FMNL2Q96PY5 1086 aa10.57□□□□□ -0.72
CHMP2A-205ENST00000600006 ZBTB1Q9Y2K1 713 aa10.57□□□□□ -0.72
CHMP2A-205ENST00000600006 USP42Q9H9J4 1324 aaKnown RBP10.57□□□□□ -0.72
CHMP2A-205ENST00000600006 NRXN2Q9P2S2 1712 aa10.56□□□□□ -0.72
CHMP2A-205ENST00000600006 KCNQ3O43525 872 aa10.56□□□□□ -0.72
CHMP2A-205ENST00000600006 RFC4P35249 363 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms