RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 AEBP1Q8IUX7 1158 aa20.19■□□□□ 0.82
IRF3-223ENST00000599223 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
IRF3-223ENST00000599223 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
IRF3-223ENST00000599223 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
IRF3-223ENST00000599223 GNPATO15228 680 aa20.18■□□□□ 0.82
IRF3-223ENST00000599223 SSFA2P28290 1259 aa20.18■□□□□ 0.82
IRF3-223ENST00000599223 SLC4A9Q96Q91 983 aa20.18■□□□□ 0.82
IRF3-223ENST00000599223 TJP1Q07157 1748 aa20.17■□□□□ 0.82
IRF3-223ENST00000599223 SCN11AQ9UI33 1791 aa20.17■□□□□ 0.82
IRF3-223ENST00000599223 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
IRF3-223ENST00000599223 VIRMAQ69YN4 1812 aaKnown RBP20.16■□□□□ 0.82
IRF3-223ENST00000599223 CICQ96RK0 1608 aaPredicted RBP20.16■□□□□ 0.82
IRF3-223ENST00000599223 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
IRF3-223ENST00000599223 CCER1Q8TC90 406 aaPredicted RBP20.15■□□□□ 0.82
IRF3-223ENST00000599223 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
IRF3-223ENST00000599223 HMGB2P26583 209 aaKnown RBP20.14■□□□□ 0.81
IRF3-223ENST00000599223 ZNF530Q6P9A1 599 aaPredicted RBP20.14■□□□□ 0.81
IRF3-223ENST00000599223 N4BP2Q86UW6 1770 aaPredicted RBP20.13■□□□□ 0.81
IRF3-223ENST00000599223 ATP10DQ9P241 1426 aa20.13■□□□□ 0.81
IRF3-223ENST00000599223 ADCY9O60503 1353 aa20.13■□□□□ 0.81
IRF3-223ENST00000599223 GRIN3BO60391 1043 aa20.13■□□□□ 0.81
IRF3-223ENST00000599223 MORC1Q86VD1 984 aa20.13■□□□□ 0.81
IRF3-223ENST00000599223 ERVV-2B6SEH9 535 aa20.12■□□□□ 0.81
IRF3-223ENST00000599223 DCAF5Q96JK2 942 aa20.12■□□□□ 0.81
IRF3-223ENST00000599223 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
IRF3-223ENST00000599223 BRCA1P38398 1863 aaKnown RBP20.11■□□□□ 0.81
IRF3-223ENST00000599223 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
IRF3-223ENST00000599223 CEP350Q5VT06 3117 aa20.1■□□□□ 0.81
IRF3-223ENST00000599223 KIF7Q2M1P5 1343 aa20.1■□□□□ 0.81
IRF3-223ENST00000599223 SENP3-EIF4A1A0A087X0R7 540 aa20.1■□□□□ 0.81
IRF3-223ENST00000599223 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
IRF3-223ENST00000599223 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
IRF3-223ENST00000599223 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
IRF3-223ENST00000599223 HSP90AB1P08238 724 aaKnown RBP20.09■□□□□ 0.81
IRF3-223ENST00000599223 MMP10P09238 476 aa20.09■□□□□ 0.81
IRF3-223ENST00000599223 IL13P35225 146 aa20.09■□□□□ 0.81
IRF3-223ENST00000599223 RBM42Q9BTD8 480 aaKnown RBP20.09■□□□□ 0.81
IRF3-223ENST00000599223 C10orf71Q711Q0 1435 aa20.09■□□□□ 0.81
IRF3-223ENST00000599223 CNTNAP4Q9C0A0 1308 aa20.08■□□□□ 0.81
IRF3-223ENST00000599223 MRC1P22897 1456 aa20.08■□□□□ 0.81
IRF3-223ENST00000599223 SULT6B1Q6IMI4 303 aa20.08■□□□□ 0.81
IRF3-223ENST00000599223 CABP4P57796 275 aa20.07■□□□□ 0.8
IRF3-223ENST00000599223 AMOTQ4VCS5 1084 aa20.07■□□□□ 0.8
IRF3-223ENST00000599223 KNSTRNQ9Y448 316 aa20.07■□□□□ 0.8
IRF3-223ENST00000599223 RTCBQ9Y3I0 505 aaKnown RBP20.06■□□□□ 0.8
IRF3-223ENST00000599223 MTHFSP49914 203 aa20.05■□□□□ 0.8
IRF3-223ENST00000599223 PTCD1O75127 700 aaKnown RBP20.04■□□□□ 0.8
IRF3-223ENST00000599223 C1orf141Q5JVX7 400 aa20.04■□□□□ 0.8
IRF3-223ENST00000599223 ARHGEF1Q92888 912 aaKnown RBP20.04■□□□□ 0.8
IRF3-223ENST00000599223 GYS1P13807 737 aa20.03■□□□□ 0.8
IRF3-223ENST00000599223 TRAPPC3LQ5T215 181 aa20.03■□□□□ 0.8
IRF3-223ENST00000599223 RC3H1Q5TC82 1133 aaKnown RBP20.03■□□□□ 0.8
IRF3-223ENST00000599223 NFATC2IPQ8NCF5 419 aa20.03■□□□□ 0.8
IRF3-223ENST00000599223 COL3A1P02461 1466 aaPredicted RBP20.03■□□□□ 0.8
IRF3-223ENST00000599223 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.8
IRF3-223ENST00000599223 RPS6KA4O75676 772 aa20.02■□□□□ 0.8
IRF3-223ENST00000599223 ADRA2BP18089 450 aa20.02■□□□□ 0.8
IRF3-223ENST00000599223 UBR2Q8IWV8 1755 aa20.02■□□□□ 0.8
IRF3-223ENST00000599223 CRKLP46109 303 aaKnown RBP20■□□□□ 0.79
IRF3-223ENST00000599223 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
IRF3-223ENST00000599223 ARFGEF1Q9Y6D6 1849 aa19.99■□□□□ 0.79
IRF3-223ENST00000599223 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
IRF3-223ENST00000599223 HMOX1P09601 288 aa19.99■□□□□ 0.79
IRF3-223ENST00000599223 SRP68Q9UHB9 627 aaKnown RBP19.99■□□□□ 0.79
IRF3-223ENST00000599223 RFC4P35249 363 aa19.98■□□□□ 0.79
IRF3-223ENST00000599223 NLGN1Q8N2Q7 840 aa19.98■□□□□ 0.79
IRF3-223ENST00000599223 USP42Q9H9J4 1324 aaKnown RBP19.98■□□□□ 0.79
IRF3-223ENST00000599223 A0A0G2JLW4 131 aa19.97■□□□□ 0.79
IRF3-223ENST00000599223 AKAP4Q5JQC9 854 aa19.97■□□□□ 0.79
IRF3-223ENST00000599223 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
IRF3-223ENST00000599223 LGR6Q9HBX8 967 aa19.97■□□□□ 0.79
IRF3-223ENST00000599223 GPBP1L1Q9HC44 474 aaPredicted RBP19.97■□□□□ 0.79
IRF3-223ENST00000599223 SIPA1L3O60292 1781 aaPredicted RBP19.96■□□□□ 0.79
IRF3-223ENST00000599223 DDR1Q08345 913 aa19.96■□□□□ 0.79
IRF3-223ENST00000599223 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
IRF3-223ENST00000599223 SLC52A2Q9HAB3 445 aa19.96■□□□□ 0.79
IRF3-223ENST00000599223 AFDNP55196 1824 aaKnown RBP19.95■□□□□ 0.78
IRF3-223ENST00000599223 DPEP1P16444 411 aa19.95■□□□□ 0.78
IRF3-223ENST00000599223 FKBP8Q14318 412 aa19.95■□□□□ 0.78
IRF3-223ENST00000599223 DNAJC10Q8IXB1 793 aa19.95■□□□□ 0.78
IRF3-223ENST00000599223 TGFB2P61812 414 aa19.94■□□□□ 0.78
IRF3-223ENST00000599223 SLC39A6Q13433 755 aa19.94■□□□□ 0.78
IRF3-223ENST00000599223 CCDC87Q9NVE4 849 aa19.94■□□□□ 0.78
IRF3-223ENST00000599223 BCS1LQ9Y276 419 aa19.94■□□□□ 0.78
IRF3-223ENST00000599223 RNMTO43148 476 aaKnown RBP19.93■□□□□ 0.78
IRF3-223ENST00000599223 MTHFSDQ2M296 383 aaKnown RBP19.93■□□□□ 0.78
IRF3-223ENST00000599223 PARP3Q9Y6F1 533 aa19.93■□□□□ 0.78
IRF3-223ENST00000599223 NRXN2Q9P2S2 1712 aa19.93■□□□□ 0.78
IRF3-223ENST00000599223 KCNA3P22001 575 aa19.92■□□□□ 0.78
IRF3-223ENST00000599223 SOS1Q07889 1333 aaPredicted RBP19.92■□□□□ 0.78
IRF3-223ENST00000599223 DLEC1Q9Y238 1755 aa19.91■□□□□ 0.78
IRF3-223ENST00000599223 DIAPH1O60610 1272 aaKnown RBP19.91■□□□□ 0.78
IRF3-223ENST00000599223 NPC1L1Q9UHC9 1359 aa19.9■□□□□ 0.78
IRF3-223ENST00000599223 KIF3CO14782 793 aa19.89■□□□□ 0.77
IRF3-223ENST00000599223 CYP19A1P11511 503 aaPredicted RBP19.89■□□□□ 0.77
IRF3-223ENST00000599223 COL15A1P39059 1388 aa19.89■□□□□ 0.77
IRF3-223ENST00000599223 SCN7AQ01118 1682 aa19.89■□□□□ 0.77
IRF3-223ENST00000599223 CNGB1Q14028 1251 aaPredicted RBP19.89■□□□□ 0.77
IRF3-223ENST00000599223 POLRMTO00411 1230 aaKnown RBP19.88■□□□□ 0.77
IRF3-223ENST00000599223 ZBTB1Q9Y2K1 713 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms