RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 GNAI1P63096 354 aa28.49■■■□□ 2.15
LTBP4-224ENST00000599016 E9PSI1 815 aa28.48■■■□□ 2.15
LTBP4-224ENST00000599016 IFT57Q9NWB7 429 aa28.48■■■□□ 2.15
LTBP4-224ENST00000599016 LAS1LQ9Y4W2 734 aaKnown RBP28.48■■■□□ 2.15
LTBP4-224ENST00000599016 DOT1LQ8TEK3 1739 aa28.48■■■□□ 2.15
LTBP4-224ENST00000599016 TOGARAM1Q9Y4F4 1720 aa28.48■■■□□ 2.15
LTBP4-224ENST00000599016 SIPA1L3O60292 1781 aaPredicted RBP28.47■■■□□ 2.15
LTBP4-224ENST00000599016 CABP4P57796 275 aa28.47■■■□□ 2.15
LTBP4-224ENST00000599016 TAF7Q15545 349 aaPredicted RBP28.47■■■□□ 2.15
LTBP4-224ENST00000599016 SLC52A2Q9HAB3 445 aa28.47■■■□□ 2.15
LTBP4-224ENST00000599016 MRC1P22897 1456 aa28.46■■■□□ 2.15
LTBP4-224ENST00000599016 ITGB4P16144 1822 aa28.46■■■□□ 2.15
LTBP4-224ENST00000599016 MYH16Q9H6N6 1097 aa28.46■■■□□ 2.15
LTBP4-224ENST00000599016 SLFN5Q08AF3 891 aa28.45■■■□□ 2.14
LTBP4-224ENST00000599016 CFAP44Q96MT7 982 aa28.45■■■□□ 2.14
LTBP4-224ENST00000599016 CDCA7LQ96GN5 454 aa28.44■■■□□ 2.14
LTBP4-224ENST00000599016 BABAM1Q9NWV8 329 aa28.44■■■□□ 2.14
LTBP4-224ENST00000599016 ZNF853P0CG23 659 aa28.42■■■□□ 2.14
LTBP4-224ENST00000599016 NFATC2IPQ8NCF5 419 aa28.42■■■□□ 2.14
LTBP4-224ENST00000599016 TMOD3Q9NYL9 352 aa28.42■■■□□ 2.14
LTBP4-224ENST00000599016 BCL9O00512 1426 aa28.42■■■□□ 2.14
LTBP4-224ENST00000599016 EZH2Q15910 746 aaKnown RBP28.41■■■□□ 2.14
LTBP4-224ENST00000599016 SPINK5Q9NQ38 1064 aaPredicted RBP28.41■■■□□ 2.14
LTBP4-224ENST00000599016 TSPYL4Q9UJ04 414 aa28.41■■■□□ 2.14
LTBP4-224ENST00000599016 BTBD11A6QL63 1104 aa28.4■■■□□ 2.14
LTBP4-224ENST00000599016 CHL1O00533 1208 aa28.4■■■□□ 2.14
LTBP4-224ENST00000599016 FAM196AQ6ZSG2 479 aa28.39■■■□□ 2.14
LTBP4-224ENST00000599016 SYTL4Q96C24 671 aaPredicted RBP28.39■■■□□ 2.14
LTBP4-224ENST00000599016 ACSBG1Q96GR2 724 aa28.39■■■□□ 2.14
LTBP4-224ENST00000599016 KDM3BQ7LBC6 1761 aa28.39■■■□□ 2.13
LTBP4-224ENST00000599016 SBF2Q86WG5 1849 aa28.39■■■□□ 2.13
LTBP4-224ENST00000599016 PRIM1P49642 420 aaKnown RBP28.38■■■□□ 2.13
LTBP4-224ENST00000599016 TRMT2AQ8IZ69 625 aaKnown RBP28.37■■■□□ 2.13
LTBP4-224ENST00000599016 MBIPQ9NS73 344 aa28.37■■■□□ 2.13
LTBP4-224ENST00000599016 MIS18AQ9NYP9 233 aa28.37■■■□□ 2.13
LTBP4-224ENST00000599016 FANCIQ9NVI1 1328 aa28.37■■■□□ 2.13
LTBP4-224ENST00000599016 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
LTBP4-224ENST00000599016 NHSQ6T4R5 1651 aa28.35■■■□□ 2.13
LTBP4-224ENST00000599016 DUSP27Q5VZP5 1158 aa28.35■■■□□ 2.13
LTBP4-224ENST00000599016 TTC5Q8N0Z6 440 aa28.33■■■□□ 2.13
LTBP4-224ENST00000599016 PIGBQ92521 554 aa28.33■■■□□ 2.13
LTBP4-224ENST00000599016 CAMKK2Q96RR4 588 aa28.33■■■□□ 2.13
LTBP4-224ENST00000599016 PAPPAQ13219 1627 aa28.32■■■□□ 2.12
LTBP4-224ENST00000599016 CENPBP07199 599 aaPredicted RBP28.3■■■□□ 2.12
LTBP4-224ENST00000599016 ZNF790Q6PG37 636 aa28.3■■■□□ 2.12
LTBP4-224ENST00000599016 KCNQ2O43526 872 aa28.29■■■□□ 2.12
LTBP4-224ENST00000599016 TRIM37O94972 964 aa28.29■■■□□ 2.12
LTBP4-224ENST00000599016 SLC39A6Q13433 755 aa28.29■■■□□ 2.12
LTBP4-224ENST00000599016 EXOSC9Q06265 439 aaKnown RBP28.28■■■□□ 2.12
LTBP4-224ENST00000599016 BTAF1O14981 1849 aa28.27■■■□□ 2.12
LTBP4-224ENST00000599016 UBR2Q8IWV8 1755 aa28.27■■■□□ 2.12
LTBP4-224ENST00000599016 KCNQ3O43525 872 aa28.26■■■□□ 2.11
LTBP4-224ENST00000599016 BCL11BQ9C0K0 894 aaPredicted RBP28.26■■■□□ 2.11
LTBP4-224ENST00000599016 EIF4A1P60842 406 aaKnown RBP28.25■■■□□ 2.11
LTBP4-224ENST00000599016 SMARCC1Q92922 1105 aaPredicted RBP28.25■■■□□ 2.11
LTBP4-224ENST00000599016 ATG3Q9NT62 314 aa28.25■■■□□ 2.11
LTBP4-224ENST00000599016 YY1P25490 414 aa28.24■■■□□ 2.11
LTBP4-224ENST00000599016 FMNL2Q96PY5 1086 aa28.24■■■□□ 2.11
LTBP4-224ENST00000599016 ASAP1Q9ULH1 1129 aa28.24■■■□□ 2.11
LTBP4-224ENST00000599016 TNS1Q9HBL0 1735 aaKnown RBP28.23■■■□□ 2.11
LTBP4-224ENST00000599016 CT47B1P0C2W7 299 aaPredicted RBP28.22■■■□□ 2.11
LTBP4-224ENST00000599016 APBA3O96018 575 aa28.21■■■□□ 2.11
LTBP4-224ENST00000599016 TWISTNBQ3B726 338 aaPredicted RBP28.21■■■□□ 2.11
LTBP4-224ENST00000599016 C8orf58Q8NAV2 365 aa28.21■■■□□ 2.11
LTBP4-224ENST00000599016 ZNF496Q96IT1 587 aaPredicted RBP28.21■■■□□ 2.11
LTBP4-224ENST00000599016 SOS1Q07889 1333 aaPredicted RBP28.2■■■□□ 2.11
LTBP4-224ENST00000599016 KCPQ6ZWJ8 1503 aa28.2■■■□□ 2.1
LTBP4-224ENST00000599016 ELL2O00472 640 aaPredicted RBP28.19■■■□□ 2.1
LTBP4-224ENST00000599016 PTCD1O75127 700 aaKnown RBP28.19■■■□□ 2.1
LTBP4-224ENST00000599016 RBM42Q9BTD8 480 aaKnown RBP28.19■■■□□ 2.1
LTBP4-224ENST00000599016 KRT24Q2M2I5 525 aa28.18■■■□□ 2.1
LTBP4-224ENST00000599016 PTF1AQ7RTS3 328 aa28.18■■■□□ 2.1
LTBP4-224ENST00000599016 CHMP4AQ9BY43 222 aa28.18■■■□□ 2.1
LTBP4-224ENST00000599016 PALLDQ8WX93 1383 aa28.18■■■□□ 2.1
LTBP4-224ENST00000599016 HEG1Q9ULI3 1381 aa28.18■■■□□ 2.1
LTBP4-224ENST00000599016 HOXB7P09629 217 aa28.17■■■□□ 2.1
LTBP4-224ENST00000599016 TSPYL6Q8N831 410 aa28.17■■■□□ 2.1
LTBP4-224ENST00000599016 SNRPA1P09661 255 aaKnown RBP28.16■■■□□ 2.1
LTBP4-224ENST00000599016 VAMP4O75379 141 aa28.15■■■□□ 2.1
LTBP4-224ENST00000599016 GIGYF1O75420 1035 aaPredicted RBP28.15■■■□□ 2.1
LTBP4-224ENST00000599016 VSIG10Q8N0Z9 540 aa28.15■■■□□ 2.1
LTBP4-224ENST00000599016 ZNF428Q96B54 188 aa28.15■■■□□ 2.1
LTBP4-224ENST00000599016 C5P01031 1676 aa28.14■■■□□ 2.1
LTBP4-224ENST00000599016 LAMB4A4D0S4 1761 aa28.14■■■□□ 2.09
LTBP4-224ENST00000599016 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
LTBP4-224ENST00000599016 LY75O60449 1722 aa28.12■■■□□ 2.09
LTBP4-224ENST00000599016 ZNF831Q5JPB2 1677 aa28.12■■■□□ 2.09
LTBP4-224ENST00000599016 LOC102724428A0A0B4J2F2 783 aa28.11■■■□□ 2.09
LTBP4-224ENST00000599016 SIK1P57059 783 aa28.11■■■□□ 2.09
LTBP4-224ENST00000599016 RCAN3Q9UKA8 241 aa28.1■■■□□ 2.09
LTBP4-224ENST00000599016 CACNA1FO60840 1977 aa28.1■■■□□ 2.09
LTBP4-224ENST00000599016 EIF2S2P20042 333 aaKnown RBP28.09■■■□□ 2.09
LTBP4-224ENST00000599016 ATP6V1AP38606 617 aa28.09■■■□□ 2.09
LTBP4-224ENST00000599016 HDGFL1Q5TGJ6 251 aa28.09■■■□□ 2.09
LTBP4-224ENST00000599016 CCDC30Q5VVM6 783 aa28.09■■■□□ 2.09
LTBP4-224ENST00000599016 CICQ96RK0 1608 aaPredicted RBP28.08■■■□□ 2.09
LTBP4-224ENST00000599016 ALDH1L2Q3SY69 923 aa28.08■■■□□ 2.09
LTBP4-224ENST00000599016 TJP1Q07157 1748 aa28.08■■■□□ 2.09
LTBP4-224ENST00000599016 PRAMEF22A3QJZ6 481 aa28.07■■■□□ 2.08
LTBP4-224ENST00000599016 RARSP54136 660 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms