RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 SMIM5Q71RC9 77 aa12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 LINC00116Q8NCU8 138 aa12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 ATG3Q9NT62 314 aa12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
ARHGEF1-215ENST00000598444 PHF14O94880 888 aa12.04□□□□□ -0.48
ARHGEF1-215ENST00000598444 MTHFSP49914 203 aa12.04□□□□□ -0.48
ARHGEF1-215ENST00000598444 CABP4P57796 275 aa12.04□□□□□ -0.48
ARHGEF1-215ENST00000598444 C1orf141Q5JVX7 400 aa12.04□□□□□ -0.48
ARHGEF1-215ENST00000598444 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-215ENST00000598444 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
ARHGEF1-215ENST00000598444 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
ARHGEF1-215ENST00000598444 ITPK1Q13572 414 aa12.03□□□□□ -0.48
ARHGEF1-215ENST00000598444 CNGB1Q14028 1251 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF1-215ENST00000598444 AMIGO3Q86WK7 504 aa12.03□□□□□ -0.48
ARHGEF1-215ENST00000598444 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
ARHGEF1-215ENST00000598444 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
ARHGEF1-215ENST00000598444 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
ARHGEF1-215ENST00000598444 ZNF831Q5JPB2 1677 aa12.02□□□□□ -0.49
ARHGEF1-215ENST00000598444 COL5A3P25940 1745 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF1-215ENST00000598444 GNPATO15228 680 aa12.01□□□□□ -0.49
ARHGEF1-215ENST00000598444 SSFA2P28290 1259 aa12.01□□□□□ -0.49
ARHGEF1-215ENST00000598444 NFATC2IPQ8NCF5 419 aa12.01□□□□□ -0.49
ARHGEF1-215ENST00000598444 KDRP35968 1356 aa12.01□□□□□ -0.49
ARHGEF1-215ENST00000598444 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF1-215ENST00000598444 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
ARHGEF1-215ENST00000598444 HMOX1P09601 288 aa12□□□□□ -0.49
ARHGEF1-215ENST00000598444 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
ARHGEF1-215ENST00000598444 PTCD1O75127 700 aaKnown RBP11.99□□□□□ -0.49
ARHGEF1-215ENST00000598444 TRAPPC3LQ5T215 181 aa11.99□□□□□ -0.49
ARHGEF1-215ENST00000598444 CD2APQ9Y5K6 639 aa11.99□□□□□ -0.49
ARHGEF1-215ENST00000598444 AKAP4Q5JQC9 854 aa11.98□□□□□ -0.49
ARHGEF1-215ENST00000598444 RC3H1Q5TC82 1133 aaKnown RBP11.98□□□□□ -0.49
ARHGEF1-215ENST00000598444 ZNF784Q8NCA9 323 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF1-215ENST00000598444 RTCBQ9Y3I0 505 aaKnown RBP11.98□□□□□ -0.49
ARHGEF1-215ENST00000598444 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
ARHGEF1-215ENST00000598444 LGR6Q9HBX8 967 aa11.97□□□□□ -0.49
ARHGEF1-215ENST00000598444 GRIN3BO60391 1043 aa11.96□□□□□ -0.49
ARHGEF1-215ENST00000598444 RPS6KA4O75676 772 aa11.96□□□□□ -0.49
ARHGEF1-215ENST00000598444 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
ARHGEF1-215ENST00000598444 C4AP0C0L4 1744 aa11.95□□□□□ -0.5
ARHGEF1-215ENST00000598444 CNTNAP4Q9C0A0 1308 aa11.95□□□□□ -0.5
ARHGEF1-215ENST00000598444 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
ARHGEF1-215ENST00000598444 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
ARHGEF1-215ENST00000598444 RFC4P35249 363 aa11.95□□□□□ -0.5
ARHGEF1-215ENST00000598444 MTHFSDQ2M296 383 aaKnown RBP11.95□□□□□ -0.5
ARHGEF1-215ENST00000598444 ARHGEF1Q92888 912 aaKnown RBP11.95□□□□□ -0.5
ARHGEF1-215ENST00000598444 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF1-215ENST00000598444 TJP1Q07157 1748 aa11.94□□□□□ -0.5
ARHGEF1-215ENST00000598444 ADRA2BP18089 450 aa11.94□□□□□ -0.5
ARHGEF1-215ENST00000598444 NLGN1Q8N2Q7 840 aa11.94□□□□□ -0.5
ARHGEF1-215ENST00000598444 SLC52A2Q9HAB3 445 aa11.94□□□□□ -0.5
ARHGEF1-215ENST00000598444 KIF13BQ9NQT8 1826 aa11.94□□□□□ -0.5
ARHGEF1-215ENST00000598444 MMP10P09238 476 aa11.93□□□□□ -0.5
ARHGEF1-215ENST00000598444 CRKLP46109 303 aaKnown RBP11.93□□□□□ -0.5
ARHGEF1-215ENST00000598444 SLC39A6Q13433 755 aa11.93□□□□□ -0.5
ARHGEF1-215ENST00000598444 ADAMTS7Q9UKP4 1686 aa11.92□□□□□ -0.5
ARHGEF1-215ENST00000598444 COL3A1P02461 1466 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF1-215ENST00000598444 WWC3Q9ULE0 1092 aa11.92□□□□□ -0.5
ARHGEF1-215ENST00000598444 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF1-215ENST00000598444 GYS1P13807 737 aa11.91□□□□□ -0.5
ARHGEF1-215ENST00000598444 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
ARHGEF1-215ENST00000598444 CFAP53Q96M91 514 aa11.91□□□□□ -0.5
ARHGEF1-215ENST00000598444 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF1-215ENST00000598444 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
ARHGEF1-215ENST00000598444 SRP68Q9UHB9 627 aaKnown RBP11.9□□□□□ -0.5
ARHGEF1-215ENST00000598444 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.5
ARHGEF1-215ENST00000598444 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.51
ARHGEF1-215ENST00000598444 MRC1P22897 1456 aa11.89□□□□□ -0.51
ARHGEF1-215ENST00000598444 GNAT3A8MTJ3 354 aa11.89□□□□□ -0.51
ARHGEF1-215ENST00000598444 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
ARHGEF1-215ENST00000598444 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
ARHGEF1-215ENST00000598444 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
ARHGEF1-215ENST00000598444 AFDNP55196 1824 aaKnown RBP11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 A0A0G2JLW4 131 aa11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 PPP2R1AP30153 589 aa11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 TGFB2P61812 414 aa11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 TEFQ10587 303 aa11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 IL17REQ8NFR9 667 aa11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 BRCA1P38398 1863 aaKnown RBP11.88□□□□□ -0.51
ARHGEF1-215ENST00000598444 KCPQ6ZWJ8 1503 aa11.87□□□□□ -0.51
ARHGEF1-215ENST00000598444 ZPR1O75312 459 aa11.87□□□□□ -0.51
ARHGEF1-215ENST00000598444 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
ARHGEF1-215ENST00000598444 FKBP8Q14318 412 aa11.87□□□□□ -0.51
ARHGEF1-215ENST00000598444 TTC5Q8N0Z6 440 aa11.87□□□□□ -0.51
ARHGEF1-215ENST00000598444 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
ARHGEF1-215ENST00000598444 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
ARHGEF1-215ENST00000598444 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
ARHGEF1-215ENST00000598444 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
ARHGEF1-215ENST00000598444 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF1-215ENST00000598444 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
ARHGEF1-215ENST00000598444 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
ARHGEF1-215ENST00000598444 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
ARHGEF1-215ENST00000598444 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF1-215ENST00000598444 PXDNLA1KZ92 1463 aa11.85□□□□□ -0.51
ARHGEF1-215ENST00000598444 DPEP1P16444 411 aa11.85□□□□□ -0.51
ARHGEF1-215ENST00000598444 CANXP27824 592 aaKnown RBP11.85□□□□□ -0.51
ARHGEF1-215ENST00000598444 C1QTNF8P60827 252 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms