RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
SOX2-OT-227ENST00000597651 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.54■□□□□ 0.56
SOX2-OT-227ENST00000597651 YBX3P16989 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
SOX2-OT-227ENST00000597651 PHF14O94880 888 aa18.53■□□□□ 0.56
SOX2-OT-227ENST00000597651 COL5A3P25940 1745 aaPredicted RBP18.53■□□□□ 0.56
SOX2-OT-227ENST00000597651 ATP6V1AP38606 617 aa18.52■□□□□ 0.56
SOX2-OT-227ENST00000597651 AK7Q96M32 723 aa18.52■□□□□ 0.56
SOX2-OT-227ENST00000597651 ZNF831Q5JPB2 1677 aa18.52■□□□□ 0.56
SOX2-OT-227ENST00000597651 ERVV-2B6SEH9 535 aa18.51■□□□□ 0.55
SOX2-OT-227ENST00000597651 GPR162Q16538 588 aa18.51■□□□□ 0.55
SOX2-OT-227ENST00000597651 SULT6B1Q6IMI4 303 aa18.51■□□□□ 0.55
SOX2-OT-227ENST00000597651 ZNF530Q6P9A1 599 aaPredicted RBP18.51■□□□□ 0.55
SOX2-OT-227ENST00000597651 FLAD1Q8NFF5 587 aa18.51■□□□□ 0.55
SOX2-OT-227ENST00000597651 DCAF5Q96JK2 942 aa18.51■□□□□ 0.55
SOX2-OT-227ENST00000597651 MYH14Q7Z406 1995 aaKnown RBP18.51■□□□□ 0.55
SOX2-OT-227ENST00000597651 SSFA2P28290 1259 aa18.5■□□□□ 0.55
SOX2-OT-227ENST00000597651 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
SOX2-OT-227ENST00000597651 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
SOX2-OT-227ENST00000597651 MTHFSP49914 203 aa18.49■□□□□ 0.55
SOX2-OT-227ENST00000597651 SCN11AQ9UI33 1791 aa18.49■□□□□ 0.55
SOX2-OT-227ENST00000597651 GNPATO15228 680 aa18.48■□□□□ 0.55
SOX2-OT-227ENST00000597651 AMOTQ4VCS5 1084 aa18.48■□□□□ 0.55
SOX2-OT-227ENST00000597651 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
SOX2-OT-227ENST00000597651 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
SOX2-OT-227ENST00000597651 TJP1Q07157 1748 aa18.46■□□□□ 0.55
SOX2-OT-227ENST00000597651 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
SOX2-OT-227ENST00000597651 VIRMAQ69YN4 1812 aaKnown RBP18.46■□□□□ 0.55
SOX2-OT-227ENST00000597651 KIAA1551Q9HCM1 1747 aa18.46■□□□□ 0.55
SOX2-OT-227ENST00000597651 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-227ENST00000597651 NFATC2IPQ8NCF5 419 aa18.45■□□□□ 0.54
SOX2-OT-227ENST00000597651 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
SOX2-OT-227ENST00000597651 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
SOX2-OT-227ENST00000597651 C4AP0C0L4 1744 aa18.45■□□□□ 0.54
SOX2-OT-227ENST00000597651 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
SOX2-OT-227ENST00000597651 HMOX1P09601 288 aa18.44■□□□□ 0.54
SOX2-OT-227ENST00000597651 CABP4P57796 275 aa18.44■□□□□ 0.54
SOX2-OT-227ENST00000597651 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
SOX2-OT-227ENST00000597651 CICQ96RK0 1608 aaPredicted RBP18.44■□□□□ 0.54
SOX2-OT-227ENST00000597651 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
SOX2-OT-227ENST00000597651 HMGB2P26583 209 aaKnown RBP18.42■□□□□ 0.54
SOX2-OT-227ENST00000597651 RC3H1Q5TC82 1133 aaKnown RBP18.42■□□□□ 0.54
SOX2-OT-227ENST00000597651 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
SOX2-OT-227ENST00000597651 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
SOX2-OT-227ENST00000597651 KIF13BQ9NQT8 1826 aa18.42■□□□□ 0.54
SOX2-OT-227ENST00000597651 MRC1P22897 1456 aa18.41■□□□□ 0.54
SOX2-OT-227ENST00000597651 C1orf141Q5JVX7 400 aa18.41■□□□□ 0.54
SOX2-OT-227ENST00000597651 WWC3Q9ULE0 1092 aa18.41■□□□□ 0.54
SOX2-OT-227ENST00000597651 RPS6KA4O75676 772 aa18.4■□□□□ 0.54
SOX2-OT-227ENST00000597651 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
SOX2-OT-227ENST00000597651 MMP10P09238 476 aa18.39■□□□□ 0.53
SOX2-OT-227ENST00000597651 GYS1P13807 737 aa18.39■□□□□ 0.53
SOX2-OT-227ENST00000597651 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.53
SOX2-OT-227ENST00000597651 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
SOX2-OT-227ENST00000597651 RTCBQ9Y3I0 505 aaKnown RBP18.39■□□□□ 0.53
SOX2-OT-227ENST00000597651 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
SOX2-OT-227ENST00000597651 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
SOX2-OT-227ENST00000597651 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
SOX2-OT-227ENST00000597651 SLC52A2Q9HAB3 445 aa18.38■□□□□ 0.53
SOX2-OT-227ENST00000597651 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
SOX2-OT-227ENST00000597651 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
SOX2-OT-227ENST00000597651 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
SOX2-OT-227ENST00000597651 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
SOX2-OT-227ENST00000597651 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
SOX2-OT-227ENST00000597651 GRIN3BO60391 1043 aa18.36■□□□□ 0.53
SOX2-OT-227ENST00000597651 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
SOX2-OT-227ENST00000597651 SRP68Q9UHB9 627 aaKnown RBP18.36■□□□□ 0.53
SOX2-OT-227ENST00000597651 C10orf71Q711Q0 1435 aa18.35■□□□□ 0.53
SOX2-OT-227ENST00000597651 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
SOX2-OT-227ENST00000597651 ADCY9O60503 1353 aa18.34■□□□□ 0.53
SOX2-OT-227ENST00000597651 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
SOX2-OT-227ENST00000597651 ADRA2BP18089 450 aa18.34■□□□□ 0.53
SOX2-OT-227ENST00000597651 DNAJC10Q8IXB1 793 aa18.34■□□□□ 0.53
SOX2-OT-227ENST00000597651 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.53
SOX2-OT-227ENST00000597651 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
SOX2-OT-227ENST00000597651 FKBP8Q14318 412 aa18.32■□□□□ 0.52
SOX2-OT-227ENST00000597651 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
SOX2-OT-227ENST00000597651 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
SOX2-OT-227ENST00000597651 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
SOX2-OT-227ENST00000597651 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
SOX2-OT-227ENST00000597651 RFC4P35249 363 aa18.31■□□□□ 0.52
SOX2-OT-227ENST00000597651 C1QTNF8P60827 252 aa18.31■□□□□ 0.52
SOX2-OT-227ENST00000597651 DDR1Q08345 913 aa18.31■□□□□ 0.52
SOX2-OT-227ENST00000597651 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
SOX2-OT-227ENST00000597651 A0A0G2JLW4 131 aa18.3■□□□□ 0.52
SOX2-OT-227ENST00000597651 KCNA3P22001 575 aa18.3■□□□□ 0.52
SOX2-OT-227ENST00000597651 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
SOX2-OT-227ENST00000597651 CFAP53Q96M91 514 aa18.29■□□□□ 0.52
SOX2-OT-227ENST00000597651 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
SOX2-OT-227ENST00000597651 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
SOX2-OT-227ENST00000597651 DPEP1P16444 411 aa18.28■□□□□ 0.52
SOX2-OT-227ENST00000597651 RALBP1Q15311 655 aa18.28■□□□□ 0.52
SOX2-OT-227ENST00000597651 CCDC87Q9NVE4 849 aa18.28■□□□□ 0.52
SOX2-OT-227ENST00000597651 ZBTB1Q9Y2K1 713 aa18.28■□□□□ 0.52
SOX2-OT-227ENST00000597651 CEP350Q5VT06 3117 aa18.28■□□□□ 0.52
SOX2-OT-227ENST00000597651 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SOX2-OT-227ENST00000597651 TGFB2P61812 414 aa18.27■□□□□ 0.52
SOX2-OT-227ENST00000597651 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
SOX2-OT-227ENST00000597651 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
SOX2-OT-227ENST00000597651 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
SOX2-OT-227ENST00000597651 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms