RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 TNRC6CQ9HCJ0 1690 aaKnown RBP15.38■□□□□ 0.05
ZNF548-207ENST00000597400 KIF24Q5T7B8 1368 aa15.37■□□□□ 0.05
ZNF548-207ENST00000597400 TOMM70O94826 608 aa15.37■□□□□ 0.05
ZNF548-207ENST00000597400 MMP10P09238 476 aa15.37■□□□□ 0.05
ZNF548-207ENST00000597400 HTRA3P83110 453 aa15.37■□□□□ 0.05
ZNF548-207ENST00000597400 NKX1-1Q15270 411 aaPredicted RBP15.37■□□□□ 0.05
ZNF548-207ENST00000597400 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
ZNF548-207ENST00000597400 ADAMTS7Q9UKP4 1686 aa15.35■□□□□ 0.05
ZNF548-207ENST00000597400 TJP1Q07157 1748 aa15.35■□□□□ 0.05
ZNF548-207ENST00000597400 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
ZNF548-207ENST00000597400 BCS1LQ9Y276 419 aa15.35■□□□□ 0.05
ZNF548-207ENST00000597400 TONSLQ96HA7 1378 aa15.35■□□□□ 0.05
ZNF548-207ENST00000597400 KCPQ6ZWJ8 1503 aa15.34■□□□□ 0.05
ZNF548-207ENST00000597400 SLC4A9Q96Q91 983 aa15.34■□□□□ 0.05
ZNF548-207ENST00000597400 HMGB2P26583 209 aaKnown RBP15.33■□□□□ 0.04
ZNF548-207ENST00000597400 ATP6V1AP38606 617 aa15.33■□□□□ 0.04
ZNF548-207ENST00000597400 COL13A1Q5TAT6 717 aaPredicted RBP15.33■□□□□ 0.04
ZNF548-207ENST00000597400 CCDC88AQ3V6T2 1871 aa15.32■□□□□ 0.04
ZNF548-207ENST00000597400 DPEP1P16444 411 aa15.32■□□□□ 0.04
ZNF548-207ENST00000597400 ATG3Q9NT62 314 aa15.32■□□□□ 0.04
ZNF548-207ENST00000597400 TMOD3Q9NYL9 352 aa15.32■□□□□ 0.04
ZNF548-207ENST00000597400 AFDNP55196 1824 aaKnown RBP15.31■□□□□ 0.04
ZNF548-207ENST00000597400 PHKG2P15735 406 aa15.31■□□□□ 0.04
ZNF548-207ENST00000597400 KCNA3P22001 575 aa15.31■□□□□ 0.04
ZNF548-207ENST00000597400 TGFB2P61812 414 aa15.31■□□□□ 0.04
ZNF548-207ENST00000597400 CARD14Q9BXL6 1004 aa15.31■□□□□ 0.04
ZNF548-207ENST00000597400 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
ZNF548-207ENST00000597400 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
ZNF548-207ENST00000597400 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
ZNF548-207ENST00000597400 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
ZNF548-207ENST00000597400 KLRG1Q96E93 195 aa15.3■□□□□ 0.04
ZNF548-207ENST00000597400 EYA1Q99502 592 aa15.3■□□□□ 0.04
ZNF548-207ENST00000597400 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
ZNF548-207ENST00000597400 GYS1P13807 737 aa15.29■□□□□ 0.04
ZNF548-207ENST00000597400 C9orf131Q5VYM1 1079 aa15.29■□□□□ 0.04
ZNF548-207ENST00000597400 JMYQ8N9B5 988 aa15.29■□□□□ 0.04
ZNF548-207ENST00000597400 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
ZNF548-207ENST00000597400 SPG7Q9UQ90 795 aa15.29■□□□□ 0.04
ZNF548-207ENST00000597400 KDM6AO15550 1401 aaPredicted RBP15.28■□□□□ 0.04
ZNF548-207ENST00000597400 FCHSD2O94868 740 aa15.28■□□□□ 0.04
ZNF548-207ENST00000597400 ARHGEF1Q92888 912 aaKnown RBP15.28■□□□□ 0.04
ZNF548-207ENST00000597400 TMF1P82094 1093 aa15.27■□□□□ 0.04
ZNF548-207ENST00000597400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.04
ZNF548-207ENST00000597400 RTCBQ9Y3I0 505 aaKnown RBP15.27■□□□□ 0.04
ZNF548-207ENST00000597400 SCN11AQ9UI33 1791 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 NRXN2Q9P2S2 1712 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 CNTNAP4Q9C0A0 1308 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 PPM1GO15355 546 aaPredicted RBP15.26■□□□□ 0.03
ZNF548-207ENST00000597400 CAPN15O75808 1086 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 TRAPPC3LQ5T215 181 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 IFNL2Q8IZJ0 200 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 NLGN1Q8N2Q7 840 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 CCDC87Q9NVE4 849 aa15.26■□□□□ 0.03
ZNF548-207ENST00000597400 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
ZNF548-207ENST00000597400 DDR1Q08345 913 aa15.24■□□□□ 0.03
ZNF548-207ENST00000597400 ADRA2BP18089 450 aa15.23■□□□□ 0.03
ZNF548-207ENST00000597400 FSTL1Q12841 308 aa15.23■□□□□ 0.03
ZNF548-207ENST00000597400 RC3H1Q5TC82 1133 aaKnown RBP15.23■□□□□ 0.03
ZNF548-207ENST00000597400 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
ZNF548-207ENST00000597400 SRP68Q9UHB9 627 aaKnown RBP15.23■□□□□ 0.03
ZNF548-207ENST00000597400 PARP3Q9Y6F1 533 aa15.23■□□□□ 0.03
ZNF548-207ENST00000597400 RPS6KA4O75676 772 aa15.22■□□□□ 0.03
ZNF548-207ENST00000597400 EIF4A2Q14240 407 aaKnown RBP15.22■□□□□ 0.03
ZNF548-207ENST00000597400 RRAGCQ9HB90 399 aa15.22■□□□□ 0.03
ZNF548-207ENST00000597400 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
ZNF548-207ENST00000597400 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
ZNF548-207ENST00000597400 SLC24A1O60721 1099 aa15.21■□□□□ 0.03
ZNF548-207ENST00000597400 CHRNA5P30532 468 aa15.21■□□□□ 0.03
ZNF548-207ENST00000597400 RFC4P35249 363 aa15.21■□□□□ 0.03
ZNF548-207ENST00000597400 FKBP8Q14318 412 aa15.21■□□□□ 0.03
ZNF548-207ENST00000597400 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
ZNF548-207ENST00000597400 PIM2Q9P1W9 311 aa15.21■□□□□ 0.03
ZNF548-207ENST00000597400 DICER1Q9UPY3 1922 aaKnown RBP15.2■□□□□ 0.02
ZNF548-207ENST00000597400 PRELPP51888 382 aa15.2■□□□□ 0.02
ZNF548-207ENST00000597400 ANKRD31Q8N7Z5 1873 aa15.2■□□□□ 0.02
ZNF548-207ENST00000597400 KDM2BQ8NHM5 1336 aa15.19■□□□□ 0.02
ZNF548-207ENST00000597400 USP42Q9H9J4 1324 aaKnown RBP15.19■□□□□ 0.02
ZNF548-207ENST00000597400 CACNA1SQ13698 1873 aa15.19■□□□□ 0.02
ZNF548-207ENST00000597400 ERVV-2B6SEH9 535 aa15.19■□□□□ 0.02
ZNF548-207ENST00000597400 RASSF7Q02833 373 aa15.19■□□□□ 0.02
ZNF548-207ENST00000597400 DALRD3Q5D0E6 543 aaKnown RBP15.19■□□□□ 0.02
ZNF548-207ENST00000597400 TNS4Q8IZW8 715 aa15.19■□□□□ 0.02
ZNF548-207ENST00000597400 COL11A2P13942 1736 aaPredicted RBP15.19■□□□□ 0.02
ZNF548-207ENST00000597400 CRKLP46109 303 aaKnown RBP15.18■□□□□ 0.02
ZNF548-207ENST00000597400 FER1L6Q2WGJ9 1857 aa15.17■□□□□ 0.02
ZNF548-207ENST00000597400 POLRMTO00411 1230 aaKnown RBP15.17■□□□□ 0.02
ZNF548-207ENST00000597400 PTCD1O75127 700 aaKnown RBP15.16■□□□□ 0.02
ZNF548-207ENST00000597400 UBR2Q8IWV8 1755 aa15.16■□□□□ 0.02
ZNF548-207ENST00000597400 HSPA1AP0DMV8 641 aaKnown RBP15.15■□□□□ 0.02
ZNF548-207ENST00000597400 HSPA1BP0DMV9 641 aaKnown RBP15.15■□□□□ 0.02
ZNF548-207ENST00000597400 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
ZNF548-207ENST00000597400 SMC1BQ8NDV3 1235 aa15.15■□□□□ 0.02
ZNF548-207ENST00000597400 TM4SF1P30408 202 aa15.14■□□□□ 0.01
ZNF548-207ENST00000597400 CABP4P57796 275 aa15.14■□□□□ 0.01
ZNF548-207ENST00000597400 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
ZNF548-207ENST00000597400 INTS5Q6P9B9 1019 aaKnown RBP15.14■□□□□ 0.01
ZNF548-207ENST00000597400 AEBP1Q8IUX7 1158 aa15.14■□□□□ 0.01
ZNF548-207ENST00000597400 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
ZNF548-207ENST00000597400 CDCA8Q53HL2 280 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms