RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 HOXC9P31274 260 aa18.61■□□□□ 0.57
IRF3-218ENST00000597369 TMF1P82094 1093 aa18.61■□□□□ 0.57
IRF3-218ENST00000597369 MLLT1Q03111 559 aaPredicted RBP18.61■□□□□ 0.57
IRF3-218ENST00000597369 DALRD3Q5D0E6 543 aaKnown RBP18.61■□□□□ 0.57
IRF3-218ENST00000597369 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
IRF3-218ENST00000597369 SIK1P57059 783 aa18.6■□□□□ 0.57
IRF3-218ENST00000597369 ABHD8Q96I13 439 aa18.6■□□□□ 0.57
IRF3-218ENST00000597369 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
IRF3-218ENST00000597369 RAPGEF4Q8WZA2 1011 aa18.59■□□□□ 0.57
IRF3-218ENST00000597369 PIGBQ92521 554 aa18.59■□□□□ 0.57
IRF3-218ENST00000597369 KDM6AO15550 1401 aaPredicted RBP18.58■□□□□ 0.57
IRF3-218ENST00000597369 NBPF6Q5VWK0 638 aa18.58■□□□□ 0.56
IRF3-218ENST00000597369 NBPF4Q96M43 638 aa18.58■□□□□ 0.56
IRF3-218ENST00000597369 MAP3K19Q56UN5 1328 aa18.57■□□□□ 0.56
IRF3-218ENST00000597369 TATP17735 454 aaPredicted RBP18.57■□□□□ 0.56
IRF3-218ENST00000597369 TRAPPC3LQ5T215 181 aa18.57■□□□□ 0.56
IRF3-218ENST00000597369 MKRN1Q9UHC7 482 aaKnown RBP18.57■□□□□ 0.56
IRF3-218ENST00000597369 CYP27B1O15528 508 aa18.56■□□□□ 0.56
IRF3-218ENST00000597369 AMPHP49418 695 aa18.56■□□□□ 0.56
IRF3-218ENST00000597369 ITPK1Q13572 414 aa18.56■□□□□ 0.56
IRF3-218ENST00000597369 PARP3Q9Y6F1 533 aa18.56■□□□□ 0.56
IRF3-218ENST00000597369 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
IRF3-218ENST00000597369 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
IRF3-218ENST00000597369 PDE4DIPQ5VU43 2346 aa18.55■□□□□ 0.56
IRF3-218ENST00000597369 CNTNAP1P78357 1384 aa18.55■□□□□ 0.56
IRF3-218ENST00000597369 CCDC88AQ3V6T2 1871 aa18.54■□□□□ 0.56
IRF3-218ENST00000597369 POTECB2RU33 542 aa18.54■□□□□ 0.56
IRF3-218ENST00000597369 GYS1P13807 737 aa18.54■□□□□ 0.56
IRF3-218ENST00000597369 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
IRF3-218ENST00000597369 ADRA2BP18089 450 aa18.53■□□□□ 0.56
IRF3-218ENST00000597369 ATP6V1AP38606 617 aa18.53■□□□□ 0.56
IRF3-218ENST00000597369 NKX1-1Q15270 411 aaPredicted RBP18.53■□□□□ 0.56
IRF3-218ENST00000597369 WBP1LQ9NX94 342 aa18.53■□□□□ 0.56
IRF3-218ENST00000597369 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
IRF3-218ENST00000597369 LMNB1P20700 586 aa18.52■□□□□ 0.56
IRF3-218ENST00000597369 LBX1P52954 281 aa18.52■□□□□ 0.56
IRF3-218ENST00000597369 RTL1A6NKG5 1358 aa18.52■□□□□ 0.55
IRF3-218ENST00000597369 USHBP1Q8N6Y0 703 aa18.51■□□□□ 0.55
IRF3-218ENST00000597369 ARHGEF1Q92888 912 aaKnown RBP18.51■□□□□ 0.55
IRF3-218ENST00000597369 TNRC18O15417 2968 aaPredicted RBP18.51■□□□□ 0.55
IRF3-218ENST00000597369 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
IRF3-218ENST00000597369 RC3H1Q5TC82 1133 aaKnown RBP18.49■□□□□ 0.55
IRF3-218ENST00000597369 SLC12A5Q9H2X9 1139 aa18.49■□□□□ 0.55
IRF3-218ENST00000597369 TERF2IPQ9NYB0 399 aa18.49■□□□□ 0.55
IRF3-218ENST00000597369 TIAM2Q8IVF5 1701 aa18.49■□□□□ 0.55
IRF3-218ENST00000597369 ZNF831Q5JPB2 1677 aa18.48■□□□□ 0.55
IRF3-218ENST00000597369 FBLN1P23142 703 aa18.48■□□□□ 0.55
IRF3-218ENST00000597369 CHADLQ6NUI6 762 aa18.48■□□□□ 0.55
IRF3-218ENST00000597369 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
IRF3-218ENST00000597369 COG3Q96JB2 828 aa18.48■□□□□ 0.55
IRF3-218ENST00000597369 ASAP1Q9ULH1 1129 aa18.48■□□□□ 0.55
IRF3-218ENST00000597369 A0A1W2PP64 1363 aa18.47■□□□□ 0.55
IRF3-218ENST00000597369 RFC4P35249 363 aa18.47■□□□□ 0.55
IRF3-218ENST00000597369 RASSF7Q02833 373 aa18.47■□□□□ 0.55
IRF3-218ENST00000597369 SMG6Q86US8 1419 aaKnown RBP18.47■□□□□ 0.55
IRF3-218ENST00000597369 CHRNA5P30532 468 aa18.46■□□□□ 0.55
IRF3-218ENST00000597369 VEGFBP49765 207 aa18.46■□□□□ 0.55
IRF3-218ENST00000597369 DPY19L2Q6NUT2 758 aa18.46■□□□□ 0.55
IRF3-218ENST00000597369 HSPA8P11142 646 aaKnown RBP18.45■□□□□ 0.54
IRF3-218ENST00000597369 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
IRF3-218ENST00000597369 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
IRF3-218ENST00000597369 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
IRF3-218ENST00000597369 CCDC85CA6NKD9 419 aa18.44■□□□□ 0.54
IRF3-218ENST00000597369 RPS6KA4O75676 772 aa18.44■□□□□ 0.54
IRF3-218ENST00000597369 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
IRF3-218ENST00000597369 DICER1Q9UPY3 1922 aaKnown RBP18.44■□□□□ 0.54
IRF3-218ENST00000597369 MYH14Q7Z406 1995 aaKnown RBP18.44■□□□□ 0.54
IRF3-218ENST00000597369 PASKQ96RG2 1323 aa18.44■□□□□ 0.54
IRF3-218ENST00000597369 KDRP35968 1356 aa18.42■□□□□ 0.54
IRF3-218ENST00000597369 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
IRF3-218ENST00000597369 DDR1Q08345 913 aa18.41■□□□□ 0.54
IRF3-218ENST00000597369 PUS7Q96PZ0 661 aaKnown RBP18.41■□□□□ 0.54
IRF3-218ENST00000597369 ROCK2O75116 1388 aaKnown RBP18.41■□□□□ 0.54
IRF3-218ENST00000597369 INSRP06213 1382 aa18.41■□□□□ 0.54
IRF3-218ENST00000597369 RRS1Q15050 365 aaKnown RBP18.4■□□□□ 0.54
IRF3-218ENST00000597369 SLC4A9Q96Q91 983 aa18.4■□□□□ 0.54
IRF3-218ENST00000597369 TMEM88BA6NKF7 163 aa18.39■□□□□ 0.53
IRF3-218ENST00000597369 MAP2K1Q02750 393 aaPredicted RBP18.39■□□□□ 0.53
IRF3-218ENST00000597369 SPG7Q9UQ90 795 aa18.39■□□□□ 0.53
IRF3-218ENST00000597369 DLEC1Q9Y238 1755 aa18.39■□□□□ 0.53
IRF3-218ENST00000597369 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
IRF3-218ENST00000597369 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
IRF3-218ENST00000597369 FKBP8Q14318 412 aa18.38■□□□□ 0.53
IRF3-218ENST00000597369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.38■□□□□ 0.53
IRF3-218ENST00000597369 NFKBIEO00221 500 aa18.37■□□□□ 0.53
IRF3-218ENST00000597369 TM4SF1P30408 202 aa18.37■□□□□ 0.53
IRF3-218ENST00000597369 HSP90AB2PQ58FF8 381 aa18.37■□□□□ 0.53
IRF3-218ENST00000597369 RASSF10A6NK89 507 aa18.36■□□□□ 0.53
IRF3-218ENST00000597369 POLRMTO00411 1230 aaKnown RBP18.36■□□□□ 0.53
IRF3-218ENST00000597369 NCAPD2Q15021 1401 aa18.36■□□□□ 0.53
IRF3-218ENST00000597369 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
IRF3-218ENST00000597369 L3MBTL2Q969R5 705 aa18.36■□□□□ 0.53
IRF3-218ENST00000597369 USP42Q9H9J4 1324 aaKnown RBP18.36■□□□□ 0.53
IRF3-218ENST00000597369 ITGBL1O95965 494 aaPredicted RBP18.35■□□□□ 0.53
IRF3-218ENST00000597369 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
IRF3-218ENST00000597369 LDHDQ86WU2 507 aa18.34■□□□□ 0.53
IRF3-218ENST00000597369 SCN4AP35499 1836 aa18.34■□□□□ 0.53
IRF3-218ENST00000597369 AFDNP55196 1824 aaKnown RBP18.34■□□□□ 0.53
IRF3-218ENST00000597369 FLT4P35916 1363 aa18.33■□□□□ 0.53
IRF3-218ENST00000597369 DEFB115Q30KQ5 88 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms