RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 ASAP1Q9ULH1 1129 aa15.79■□□□□ 0.12
SYMPK-207ENST00000596824 ATG3Q9NT62 314 aa15.78■□□□□ 0.12
SYMPK-207ENST00000596824 LOC102724428A0A0B4J2F2 783 aa15.77■□□□□ 0.12
SYMPK-207ENST00000596824 HMOX1P09601 288 aa15.77■□□□□ 0.12
SYMPK-207ENST00000596824 HMGB2P26583 209 aaKnown RBP15.77■□□□□ 0.12
SYMPK-207ENST00000596824 SIK1P57059 783 aa15.77■□□□□ 0.12
SYMPK-207ENST00000596824 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
SYMPK-207ENST00000596824 COL23A1Q86Y22 540 aaPredicted RBP15.77■□□□□ 0.12
SYMPK-207ENST00000596824 MAP3K5Q99683 1374 aa15.75■□□□□ 0.11
SYMPK-207ENST00000596824 LINC00116Q8NCU8 138 aa15.75■□□□□ 0.11
SYMPK-207ENST00000596824 ARXQ96QS3 562 aa15.75■□□□□ 0.11
SYMPK-207ENST00000596824 FHDC1Q9C0D6 1143 aaPredicted RBP15.75■□□□□ 0.11
SYMPK-207ENST00000596824 ITPK1Q13572 414 aa15.74■□□□□ 0.11
SYMPK-207ENST00000596824 AKAP4Q5JQC9 854 aa15.74■□□□□ 0.11
SYMPK-207ENST00000596824 AK7Q96M32 723 aa15.74■□□□□ 0.11
SYMPK-207ENST00000596824 KIF13BQ9NQT8 1826 aa15.73■□□□□ 0.11
SYMPK-207ENST00000596824 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
SYMPK-207ENST00000596824 CABP4P57796 275 aa15.73■□□□□ 0.11
SYMPK-207ENST00000596824 AMIGO3Q86WK7 504 aa15.73■□□□□ 0.11
SYMPK-207ENST00000596824 SYT17Q9BSW7 474 aa15.73■□□□□ 0.11
SYMPK-207ENST00000596824 MSH5O43196 834 aa15.72■□□□□ 0.11
SYMPK-207ENST00000596824 POLD1P28340 1107 aa15.72■□□□□ 0.11
SYMPK-207ENST00000596824 PPP2R1AP30153 589 aa15.72■□□□□ 0.11
SYMPK-207ENST00000596824 MTHFSDQ2M296 383 aaKnown RBP15.72■□□□□ 0.11
SYMPK-207ENST00000596824 FLAD1Q8NFF5 587 aa15.72■□□□□ 0.11
SYMPK-207ENST00000596824 SLC4A9Q96Q91 983 aa15.72■□□□□ 0.11
SYMPK-207ENST00000596824 U2SURPO15042 1029 aaKnown RBP15.71■□□□□ 0.11
SYMPK-207ENST00000596824 NFATC2IPQ8NCF5 419 aa15.71■□□□□ 0.11
SYMPK-207ENST00000596824 KCPQ6ZWJ8 1503 aa15.71■□□□□ 0.11
SYMPK-207ENST00000596824 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
SYMPK-207ENST00000596824 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
SYMPK-207ENST00000596824 KIAA1551Q9HCM1 1747 aa15.69■□□□□ 0.1
SYMPK-207ENST00000596824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.69■□□□□ 0.1
SYMPK-207ENST00000596824 RNMTO43148 476 aaKnown RBP15.69■□□□□ 0.1
SYMPK-207ENST00000596824 PHF14O94880 888 aa15.69■□□□□ 0.1
SYMPK-207ENST00000596824 SSFA2P28290 1259 aa15.69■□□□□ 0.1
SYMPK-207ENST00000596824 MSL1Q68DK7 614 aa15.69■□□□□ 0.1
SYMPK-207ENST00000596824 SMIM5Q71RC9 77 aa15.69■□□□□ 0.1
SYMPK-207ENST00000596824 SLC52A2Q9HAB3 445 aa15.69■□□□□ 0.1
SYMPK-207ENST00000596824 LGR6Q9HBX8 967 aa15.69■□□□□ 0.1
SYMPK-207ENST00000596824 GNPATO15228 680 aa15.68■□□□□ 0.1
SYMPK-207ENST00000596824 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
SYMPK-207ENST00000596824 BRCA1P38398 1863 aaKnown RBP15.67■□□□□ 0.1
SYMPK-207ENST00000596824 N4BP2Q86UW6 1770 aaPredicted RBP15.67■□□□□ 0.1
SYMPK-207ENST00000596824 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
SYMPK-207ENST00000596824 RSPH6AQ9H0K4 717 aa15.66■□□□□ 0.1
SYMPK-207ENST00000596824 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
SYMPK-207ENST00000596824 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
SYMPK-207ENST00000596824 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
SYMPK-207ENST00000596824 GAS2L2Q8NHY3 880 aa15.65■□□□□ 0.1
SYMPK-207ENST00000596824 AFDNP55196 1824 aaKnown RBP15.64■□□□□ 0.09
SYMPK-207ENST00000596824 PRKAR2BP31323 418 aa15.64■□□□□ 0.09
SYMPK-207ENST00000596824 NUDCQ9Y266 331 aa15.64■□□□□ 0.09
SYMPK-207ENST00000596824 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.09
SYMPK-207ENST00000596824 GNAT3A8MTJ3 354 aa15.63■□□□□ 0.09
SYMPK-207ENST00000596824 NLGN2Q8NFZ4 835 aa15.63■□□□□ 0.09
SYMPK-207ENST00000596824 PHACTR3Q96KR7 559 aa15.63■□□□□ 0.09
SYMPK-207ENST00000596824 RTCBQ9Y3I0 505 aaKnown RBP15.63■□□□□ 0.09
SYMPK-207ENST00000596824 LAMB4A4D0S4 1761 aa15.62■□□□□ 0.09
SYMPK-207ENST00000596824 U2AF1L5P0DN76 240 aaPredicted RBP15.62■□□□□ 0.09
SYMPK-207ENST00000596824 U2AF1Q01081 240 aaKnown RBP eCLIP15.62■□□□□ 0.09
SYMPK-207ENST00000596824 SLC39A6Q13433 755 aa15.62■□□□□ 0.09
SYMPK-207ENST00000596824 CEMIPQ8WUJ3 1361 aa15.62■□□□□ 0.09
SYMPK-207ENST00000596824 SCN7AQ01118 1682 aa15.61■□□□□ 0.09
SYMPK-207ENST00000596824 RPS6KA4O75676 772 aa15.61■□□□□ 0.09
SYMPK-207ENST00000596824 ADRA2BP18089 450 aa15.61■□□□□ 0.09
SYMPK-207ENST00000596824 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
SYMPK-207ENST00000596824 IL17REQ8NFR9 667 aa15.61■□□□□ 0.09
SYMPK-207ENST00000596824 BCORQ6W2J9 1755 aa15.61■□□□□ 0.09
SYMPK-207ENST00000596824 FCHSD2O94868 740 aa15.6■□□□□ 0.09
SYMPK-207ENST00000596824 TRAPPC3LQ5T215 181 aa15.6■□□□□ 0.09
SYMPK-207ENST00000596824 ARHGEF1Q92888 912 aaKnown RBP15.6■□□□□ 0.09
SYMPK-207ENST00000596824 YY1P25490 414 aa15.59■□□□□ 0.09
SYMPK-207ENST00000596824 DNAJC10Q8IXB1 793 aa15.59■□□□□ 0.09
SYMPK-207ENST00000596824 CD2APQ9Y5K6 639 aa15.59■□□□□ 0.09
SYMPK-207ENST00000596824 NRXN2Q9P2S2 1712 aa15.59■□□□□ 0.09
SYMPK-207ENST00000596824 ARFGEF1Q9Y6D6 1849 aa15.59■□□□□ 0.09
SYMPK-207ENST00000596824 DLEC1Q9Y238 1755 aa15.58■□□□□ 0.08
SYMPK-207ENST00000596824 TEFQ10587 303 aa15.58■□□□□ 0.08
SYMPK-207ENST00000596824 INTS5Q6P9B9 1019 aaKnown RBP15.58■□□□□ 0.08
SYMPK-207ENST00000596824 CYP19A1P11511 503 aaPredicted RBP15.57■□□□□ 0.08
SYMPK-207ENST00000596824 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
SYMPK-207ENST00000596824 VSIG10Q8N0Z9 540 aa15.57■□□□□ 0.08
SYMPK-207ENST00000596824 CCDC87Q9NVE4 849 aa15.57■□□□□ 0.08
SYMPK-207ENST00000596824 MMP10P09238 476 aa15.56■□□□□ 0.08
SYMPK-207ENST00000596824 GYS1P13807 737 aa15.56■□□□□ 0.08
SYMPK-207ENST00000596824 RFC4P35249 363 aa15.56■□□□□ 0.08
SYMPK-207ENST00000596824 GPR162Q16538 588 aa15.56■□□□□ 0.08
SYMPK-207ENST00000596824 C10orf71Q711Q0 1435 aa15.55■□□□□ 0.08
SYMPK-207ENST00000596824 HEG1Q9ULI3 1381 aa15.55■□□□□ 0.08
SYMPK-207ENST00000596824 SOS1Q07889 1333 aaPredicted RBP15.55■□□□□ 0.08
SYMPK-207ENST00000596824 USP42Q9H9J4 1324 aaKnown RBP15.55■□□□□ 0.08
SYMPK-207ENST00000596824 RALBP1Q15311 655 aa15.55■□□□□ 0.08
SYMPK-207ENST00000596824 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
SYMPK-207ENST00000596824 TTC5Q8N0Z6 440 aa15.55■□□□□ 0.08
SYMPK-207ENST00000596824 NLGN1Q8N2Q7 840 aa15.55■□□□□ 0.08
SYMPK-207ENST00000596824 COL15A1P39059 1388 aa15.54■□□□□ 0.08
SYMPK-207ENST00000596824 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
SYMPK-207ENST00000596824 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
SYMPK-207ENST00000596824 SRP68Q9UHB9 627 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms