RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 LINC00116Q8NCU8 138 aa29.12■■■□□ 2.25
C19orf54-205ENST00000596809 MAP3K5Q99683 1374 aa29.09■■■□□ 2.25
C19orf54-205ENST00000596809 AKAP4Q5JQC9 854 aa29.08■■■□□ 2.25
C19orf54-205ENST00000596809 AMIGO3Q86WK7 504 aa29.08■■■□□ 2.25
C19orf54-205ENST00000596809 NFATC2IPQ8NCF5 419 aa29.08■■■□□ 2.25
C19orf54-205ENST00000596809 RBM42Q9BTD8 480 aaKnown RBP29.08■■■□□ 2.25
C19orf54-205ENST00000596809 C4BP0C0L5 1744 aa29.08■■■□□ 2.25
C19orf54-205ENST00000596809 TAF1LQ8IZX4 1826 aa29.08■■■□□ 2.25
C19orf54-205ENST00000596809 MSL1Q68DK7 614 aa29.07■■■□□ 2.24
C19orf54-205ENST00000596809 SMIM5Q71RC9 77 aa29.07■■■□□ 2.24
C19orf54-205ENST00000596809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.06■■■□□ 2.24
C19orf54-205ENST00000596809 PHF14O94880 888 aa29.06■■■□□ 2.24
C19orf54-205ENST00000596809 KLHL34Q8N239 644 aa29.06■■■□□ 2.24
C19orf54-205ENST00000596809 SLC4A9Q96Q91 983 aa29.06■■■□□ 2.24
C19orf54-205ENST00000596809 COL24A1Q17RW2 1714 aa29.04■■■□□ 2.24
C19orf54-205ENST00000596809 U2SURPO15042 1029 aaKnown RBP29.04■■■□□ 2.24
C19orf54-205ENST00000596809 SSFA2P28290 1259 aa29.04■■■□□ 2.24
C19orf54-205ENST00000596809 MTHFSDQ2M296 383 aaKnown RBP29.03■■■□□ 2.24
C19orf54-205ENST00000596809 COL3A1P02461 1466 aaPredicted RBP29.03■■■□□ 2.24
C19orf54-205ENST00000596809 GNPATO15228 680 aa29.02■■■□□ 2.24
C19orf54-205ENST00000596809 LGR6Q9HBX8 967 aa29.02■■■□□ 2.24
C19orf54-205ENST00000596809 PTCD1O75127 700 aaKnown RBP29■■■□□ 2.23
C19orf54-205ENST00000596809 CFAP53Q96M91 514 aa29■■■□□ 2.23
C19orf54-205ENST00000596809 RNMTO43148 476 aaKnown RBP28.99■■■□□ 2.23
C19orf54-205ENST00000596809 YY1P25490 414 aa28.99■■■□□ 2.23
C19orf54-205ENST00000596809 SLC52A2Q9HAB3 445 aa28.98■■■□□ 2.23
C19orf54-205ENST00000596809 PPP2R1AP30153 589 aa28.97■■■□□ 2.23
C19orf54-205ENST00000596809 RC3H1Q5TC82 1133 aaKnown RBP28.97■■■□□ 2.23
C19orf54-205ENST00000596809 RTCBQ9Y3I0 505 aaKnown RBP28.96■■■□□ 2.23
C19orf54-205ENST00000596809 NLGN2Q8NFZ4 835 aa28.95■■■□□ 2.22
C19orf54-205ENST00000596809 UBR3Q6ZT12 1888 aa28.95■■■□□ 2.22
C19orf54-205ENST00000596809 TRAPPC3LQ5T215 181 aa28.94■■■□□ 2.22
C19orf54-205ENST00000596809 CNTNAP4Q9C0A0 1308 aa28.94■■■□□ 2.22
C19orf54-205ENST00000596809 ZNF831Q5JPB2 1677 aa28.93■■■□□ 2.22
C19orf54-205ENST00000596809 GPR162Q16538 588 aa28.92■■■□□ 2.22
C19orf54-205ENST00000596809 NUDCQ9Y266 331 aa28.92■■■□□ 2.22
C19orf54-205ENST00000596809 RPS6KA4O75676 772 aa28.91■■■□□ 2.22
C19orf54-205ENST00000596809 SCN11AQ9UI33 1791 aa28.9■■■□□ 2.22
C19orf54-205ENST00000596809 GAS2L2Q8NHY3 880 aa28.9■■■□□ 2.22
C19orf54-205ENST00000596809 CD2APQ9Y5K6 639 aa28.9■■■□□ 2.22
C19orf54-205ENST00000596809 ADRA2BP18089 450 aa28.89■■■□□ 2.22
C19orf54-205ENST00000596809 SLC39A6Q13433 755 aa28.89■■■□□ 2.22
C19orf54-205ENST00000596809 ARHGEF1Q92888 912 aaKnown RBP28.89■■■□□ 2.22
C19orf54-205ENST00000596809 MRC1P22897 1456 aa28.87■■■□□ 2.21
C19orf54-205ENST00000596809 GNAT3A8MTJ3 354 aa28.87■■■□□ 2.21
C19orf54-205ENST00000596809 PRKAR2BP31323 418 aa28.87■■■□□ 2.21
C19orf54-205ENST00000596809 CRKLP46109 303 aaKnown RBP28.87■■■□□ 2.21
C19orf54-205ENST00000596809 PELP1Q8IZL8 1130 aaKnown RBP28.87■■■□□ 2.21
C19orf54-205ENST00000596809 PHACTR3Q96KR7 559 aa28.87■■■□□ 2.21
C19orf54-205ENST00000596809 RSPH6AQ9H0K4 717 aa28.87■■■□□ 2.21
C19orf54-205ENST00000596809 U2AF1L5P0DN76 240 aaPredicted RBP28.86■■■□□ 2.21
C19orf54-205ENST00000596809 U2AF1Q01081 240 aaKnown RBP eCLIP28.86■■■□□ 2.21
C19orf54-205ENST00000596809 IL17REQ8NFR9 667 aa28.86■■■□□ 2.21
C19orf54-205ENST00000596809 RFC4P35249 363 aa28.85■■■□□ 2.21
C19orf54-205ENST00000596809 DNAJC10Q8IXB1 793 aa28.84■■■□□ 2.21
C19orf54-205ENST00000596809 NLGN1Q8N2Q7 840 aa28.84■■■□□ 2.21
C19orf54-205ENST00000596809 COL5A3P25940 1745 aaPredicted RBP28.83■■■□□ 2.21
C19orf54-205ENST00000596809 MMP10P09238 476 aa28.82■■■□□ 2.2
C19orf54-205ENST00000596809 TEFQ10587 303 aa28.82■■■□□ 2.2
C19orf54-205ENST00000596809 INTS5Q6P9B9 1019 aaKnown RBP28.82■■■□□ 2.2
C19orf54-205ENST00000596809 ADAMTS7Q9UKP4 1686 aa28.82■■■□□ 2.2
C19orf54-205ENST00000596809 FCHSD2O94868 740 aa28.81■■■□□ 2.2
C19orf54-205ENST00000596809 GYS1P13807 737 aa28.8■■■□□ 2.2
C19orf54-205ENST00000596809 CYP19A1P11511 503 aaPredicted RBP28.78■■■□□ 2.2
C19orf54-205ENST00000596809 YBX3P16989 372 aaKnown RBP eCLIP28.78■■■□□ 2.28e-7■□□□□ 8.8
C19orf54-205ENST00000596809 TTC5Q8N0Z6 440 aa28.78■■■□□ 2.2
C19orf54-205ENST00000596809 VSIG10Q8N0Z9 540 aa28.78■■■□□ 2.2
C19orf54-205ENST00000596809 CCDC87Q9NVE4 849 aa28.78■■■□□ 2.2
C19orf54-205ENST00000596809 TJP1Q07157 1748 aa28.77■■■□□ 2.2
C19orf54-205ENST00000596809 MYH14Q7Z406 1995 aaKnown RBP28.77■■■□□ 2.2
C19orf54-205ENST00000596809 KCPQ6ZWJ8 1503 aa28.76■■■□□ 2.19
C19orf54-205ENST00000596809 GRIN3BO60391 1043 aa28.76■■■□□ 2.19
C19orf54-205ENST00000596809 CICQ96RK0 1608 aaPredicted RBP28.76■■■□□ 2.19
C19orf54-205ENST00000596809 SRP68Q9UHB9 627 aaKnown RBP28.75■■■□□ 2.19
C19orf54-205ENST00000596809 CEMIPQ8WUJ3 1361 aa28.75■■■□□ 2.19
C19orf54-205ENST00000596809 ZNF790Q6PG37 636 aa28.74■■■□□ 2.19
C19orf54-205ENST00000596809 USP42Q9H9J4 1324 aaKnown RBP28.73■■■□□ 2.19
C19orf54-205ENST00000596809 ZNF496Q96IT1 587 aaPredicted RBP28.73■■■□□ 2.19
C19orf54-205ENST00000596809 SOS1Q07889 1333 aaPredicted RBP28.71■■■□□ 2.19
C19orf54-205ENST00000596809 DDX10Q13206 875 aaKnown RBP28.71■■■□□ 2.19
C19orf54-205ENST00000596809 RTF1Q92541 710 aaKnown RBP28.71■■■□□ 2.19
C19orf54-205ENST00000596809 PARP3Q9Y6F1 533 aa28.71■■■□□ 2.19
C19orf54-205ENST00000596809 FKBP8Q14318 412 aa28.7■■■□□ 2.18
C19orf54-205ENST00000596809 ZNF784Q8NCA9 323 aaPredicted RBP28.7■■■□□ 2.18
C19orf54-205ENST00000596809 ZBTB1Q9Y2K1 713 aa28.7■■■□□ 2.18
C19orf54-205ENST00000596809 VIRMAQ69YN4 1812 aaKnown RBP28.7■■■□□ 2.18
C19orf54-205ENST00000596809 STARD3NLO95772 234 aa28.69■■■□□ 2.18
C19orf54-205ENST00000596809 BTBD11A6QL63 1104 aa28.68■■■□□ 2.18
C19orf54-205ENST00000596809 ZPR1O75312 459 aa28.68■■■□□ 2.18
C19orf54-205ENST00000596809 MCM10Q7L590 875 aa28.68■■■□□ 2.18
C19orf54-205ENST00000596809 HEG1Q9ULI3 1381 aa28.67■■■□□ 2.18
C19orf54-205ENST00000596809 RALBP1Q15311 655 aa28.67■■■□□ 2.18
C19orf54-205ENST00000596809 TEX13AQ9BXU3 409 aaPredicted RBP28.67■■■□□ 2.18
C19orf54-205ENST00000596809 WWC3Q9ULE0 1092 aa28.67■■■□□ 2.18
C19orf54-205ENST00000596809 HTATSF1O43719 755 aaKnown RBP28.66■■■□□ 2.18
C19orf54-205ENST00000596809 CANXP27824 592 aaKnown RBP28.66■■■□□ 2.18
C19orf54-205ENST00000596809 TGFB2P61812 414 aa28.66■■■□□ 2.18
C19orf54-205ENST00000596809 USPL1Q5W0Q7 1092 aa28.66■■■□□ 2.18
C19orf54-205ENST00000596809 FMNL2Q96PY5 1086 aa28.66■■■□□ 2.18
C19orf54-205ENST00000596809 KCNQ3O43525 872 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms