RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 NFATC2IPQ8NCF5 419 aa28.2■■■□□ 2.1
PNKP-209ENST00000596726 GAS2L2Q8NHY3 880 aa28.2■■■□□ 2.1
PNKP-209ENST00000596726 PHACTR3Q96KR7 559 aa28.2■■■□□ 2.1
PNKP-209ENST00000596726 SPON1Q9HCB6 807 aa28.2■■■□□ 2.1
PNKP-209ENST00000596726 ZNF831Q5JPB2 1677 aa28.19■■■□□ 2.1
PNKP-209ENST00000596726 MRC1P22897 1456 aa28.19■■■□□ 2.1
PNKP-209ENST00000596726 C4BP0C0L5 1744 aa28.18■■■□□ 2.1
PNKP-209ENST00000596726 PNPLA7Q6ZV29 1317 aa28.18■■■□□ 2.1
PNKP-209ENST00000596726 SLC52A2Q9HAB3 445 aa28.17■■■□□ 2.1
PNKP-209ENST00000596726 TFCP2L1Q9NZI6 479 aa28.17■■■□□ 2.1
PNKP-209ENST00000596726 MYBBP1AQ9BQG0 1328 aaKnown RBP28.17■■■□□ 2.1
PNKP-209ENST00000596726 MAP3K5Q99683 1374 aa28.15■■■□□ 2.1
PNKP-209ENST00000596726 ZBTB7AO95365 584 aa28.15■■■□□ 2.1
PNKP-209ENST00000596726 ZNF316A6NFI3 1004 aaPredicted RBP28.14■■■□□ 2.1
PNKP-209ENST00000596726 ITPK1Q13572 414 aa28.14■■■□□ 2.1
PNKP-209ENST00000596726 SLC4A9Q96Q91 983 aa28.14■■■□□ 2.1
PNKP-209ENST00000596726 GNAT3A8MTJ3 354 aa28.13■■■□□ 2.09
PNKP-209ENST00000596726 ATP6V1AP38606 617 aa28.13■■■□□ 2.09
PNKP-209ENST00000596726 LINC00116Q8NCU8 138 aa28.13■■■□□ 2.09
PNKP-209ENST00000596726 MTFR1LQ9H019 292 aa28.13■■■□□ 2.09
PNKP-209ENST00000596726 IL17REQ8NFR9 667 aa28.12■■■□□ 2.09
PNKP-209ENST00000596726 PRKRIP1Q9H875 184 aaPredicted RBP28.12■■■□□ 2.09
PNKP-209ENST00000596726 UBR3Q6ZT12 1888 aa28.12■■■□□ 2.09
PNKP-209ENST00000596726 PTGER2P43116 358 aa28.11■■■□□ 2.09
PNKP-209ENST00000596726 SLC16A10Q8TF71 515 aa28.11■■■□□ 2.09
PNKP-209ENST00000596726 ATF5Q9Y2D1 282 aaPredicted RBP28.11■■■□□ 2.09
PNKP-209ENST00000596726 COL24A1Q17RW2 1714 aa28.11■■■□□ 2.09
PNKP-209ENST00000596726 COL5A3P25940 1745 aaPredicted RBP28.1■■■□□ 2.09
PNKP-209ENST00000596726 SIPA1L3O60292 1781 aaPredicted RBP28.1■■■□□ 2.09
PNKP-209ENST00000596726 RBM42Q9BTD8 480 aaKnown RBP28.1■■■□□ 2.09
PNKP-209ENST00000596726 SGIP1Q9BQI5 828 aa28.09■■■□□ 2.09
PNKP-209ENST00000596726 CICQ96RK0 1608 aaPredicted RBP28.08■■■□□ 2.09
PNKP-209ENST00000596726 COL23A1Q86Y22 540 aaPredicted RBP28.08■■■□□ 2.09
PNKP-209ENST00000596726 PLEKHF1Q96S99 279 aa28.08■■■□□ 2.09
PNKP-209ENST00000596726 AK7Q96M32 723 aa28.07■■■□□ 2.08
PNKP-209ENST00000596726 CEMIPQ8WUJ3 1361 aa28.07■■■□□ 2.08
PNKP-209ENST00000596726 PTCD1O75127 700 aaKnown RBP28.06■■■□□ 2.08
PNKP-209ENST00000596726 AMIGO3Q86WK7 504 aa28.06■■■□□ 2.08
PNKP-209ENST00000596726 FLAD1Q8NFF5 587 aa28.05■■■□□ 2.08
PNKP-209ENST00000596726 DLG5Q8TDM6 1919 aa28.04■■■□□ 2.08
PNKP-209ENST00000596726 TJP1Q07157 1748 aa28.04■■■□□ 2.08
PNKP-209ENST00000596726 SLC39A6Q13433 755 aa28.04■■■□□ 2.08
PNKP-209ENST00000596726 MYH14Q7Z406 1995 aaKnown RBP28.04■■■□□ 2.08
PNKP-209ENST00000596726 UBR2Q8IWV8 1755 aa28.04■■■□□ 2.08
PNKP-209ENST00000596726 KCPQ6ZWJ8 1503 aa28.02■■■□□ 2.08
PNKP-209ENST00000596726 TEFQ10587 303 aa28.02■■■□□ 2.08
PNKP-209ENST00000596726 RC3H1Q5TC82 1133 aaKnown RBP28.02■■■□□ 2.08
PNKP-209ENST00000596726 PNNQ9H307 717 aaKnown RBP28.02■■■□□ 2.08
PNKP-209ENST00000596726 PPP1R1BQ9UD71 204 aaPredicted RBP28.02■■■□□ 2.08
PNKP-209ENST00000596726 CNTNAP4Q9C0A0 1308 aa28.01■■■□□ 2.07
PNKP-209ENST00000596726 HTATSF1O43719 755 aaKnown RBP28.01■■■□□ 2.07
PNKP-209ENST00000596726 SSFA2P28290 1259 aa28.01■■■□□ 2.07
PNKP-209ENST00000596726 NEFMP07197 916 aa28■■■□□ 2.07
PNKP-209ENST00000596726 SMIM5Q71RC9 77 aa28■■■□□ 2.07
PNKP-209ENST00000596726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.99■■■□□ 2.07
PNKP-209ENST00000596726 GNPATO15228 680 aa27.99■■■□□ 2.07
PNKP-209ENST00000596726 MSH5O43196 834 aa27.99■■■□□ 2.07
PNKP-209ENST00000596726 RTF1Q92541 710 aaKnown RBP27.98■■■□□ 2.07
PNKP-209ENST00000596726 MCM10Q7L590 875 aa27.97■■■□□ 2.07
PNKP-209ENST00000596726 PHF14O94880 888 aa27.96■■■□□ 2.07
PNKP-209ENST00000596726 NFE2L2Q16236 605 aa27.96■■■□□ 2.07
PNKP-209ENST00000596726 VSIG10Q8N0Z9 540 aa27.96■■■□□ 2.07
PNKP-209ENST00000596726 ZNF790Q6PG37 636 aa27.95■■■□□ 2.06
PNKP-209ENST00000596726 RPS6KA4O75676 772 aa27.94■■■□□ 2.06
PNKP-209ENST00000596726 CRKLP46109 303 aaKnown RBP27.94■■■□□ 2.06
PNKP-209ENST00000596726 DCTN1Q14203 1278 aa27.94■■■□□ 2.06
PNKP-209ENST00000596726 DNAJC10Q8IXB1 793 aa27.94■■■□□ 2.06
PNKP-209ENST00000596726 ARXQ96QS3 562 aa27.94■■■□□ 2.06
PNKP-209ENST00000596726 RTCBQ9Y3I0 505 aaKnown RBP27.94■■■□□ 2.06
PNKP-209ENST00000596726 MAPK8IP3Q9UPT6 1336 aa27.93■■■□□ 2.06
PNKP-209ENST00000596726 POLD1P28340 1107 aa27.93■■■□□ 2.06
PNKP-209ENST00000596726 TTC5Q8N0Z6 440 aa27.93■■■□□ 2.06
PNKP-209ENST00000596726 BTBD11A6QL63 1104 aa27.92■■■□□ 2.06
PNKP-209ENST00000596726 ADRA2BP18089 450 aa27.91■■■□□ 2.06
PNKP-209ENST00000596726 TRAPPC3LQ5T215 181 aa27.91■■■□□ 2.06
PNKP-209ENST00000596726 INTS5Q6P9B9 1019 aaKnown RBP27.91■■■□□ 2.06
PNKP-209ENST00000596726 ZNF496Q96IT1 587 aaPredicted RBP27.91■■■□□ 2.06
PNKP-209ENST00000596726 CYP19A1P11511 503 aaPredicted RBP27.9■■■□□ 2.06
PNKP-209ENST00000596726 WDR43Q15061 677 aaKnown RBP eCLIP27.9■■■□□ 2.06
PNKP-209ENST00000596726 HEG1Q9ULI3 1381 aa27.89■■■□□ 2.06
PNKP-209ENST00000596726 KCNQ3O43525 872 aa27.89■■■□□ 2.06
PNKP-209ENST00000596726 MSL1Q68DK7 614 aa27.89■■■□□ 2.06
PNKP-209ENST00000596726 FHDC1Q9C0D6 1143 aaPredicted RBP27.89■■■□□ 2.06
PNKP-209ENST00000596726 ADAMTS8Q9UP79 889 aa27.89■■■□□ 2.06
PNKP-209ENST00000596726 C4AP0C0L4 1744 aa27.89■■■□□ 2.05
PNKP-209ENST00000596726 ARHGEF1Q92888 912 aaKnown RBP27.88■■■□□ 2.05
PNKP-209ENST00000596726 FMNL2Q96PY5 1086 aa27.87■■■□□ 2.05
PNKP-209ENST00000596726 CCDC87Q9NVE4 849 aa27.87■■■□□ 2.05
PNKP-209ENST00000596726 TAF7Q15545 349 aaPredicted RBP27.86■■■□□ 2.05
PNKP-209ENST00000596726 SYT17Q9BSW7 474 aa27.86■■■□□ 2.05
PNKP-209ENST00000596726 TMPOP42166 694 aaKnown RBP27.85■■■□□ 2.05
PNKP-209ENST00000596726 RUNDC1Q96C34 613 aa27.85■■■□□ 2.05
PNKP-209ENST00000596726 CCDC146Q8IYE0 955 aa27.84■■■□□ 2.05
PNKP-209ENST00000596726 TEX13AQ9BXU3 409 aaPredicted RBP27.84■■■□□ 2.05
PNKP-209ENST00000596726 RIPK4P57078 832 aa27.83■■■□□ 2.05
PNKP-209ENST00000596726 KDM3BQ7LBC6 1761 aa27.82■■■□□ 2.04
PNKP-209ENST00000596726 RFC4P35249 363 aa27.82■■■□□ 2.04
PNKP-209ENST00000596726 CCDC184Q52MB2 194 aa27.82■■■□□ 2.04
PNKP-209ENST00000596726 THUMPD2Q9BTF0 503 aaKnown RBP27.82■■■□□ 2.04
PNKP-209ENST00000596726 ZBTB1Q9Y2K1 713 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms