RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
CHMP2A-202ENST00000596708 ATG3Q9NT62 314 aa14.5□□□□□ -0.09
CHMP2A-202ENST00000596708 IGSF1Q8N6C5 1336 aa14.49□□□□□ -0.09
CHMP2A-202ENST00000596708 PLEKHO1Q53GL0 409 aaPredicted RBP14.49□□□□□ -0.09
CHMP2A-202ENST00000596708 VIRMAQ69YN4 1812 aaKnown RBP14.49□□□□□ -0.09
CHMP2A-202ENST00000596708 N4BP2Q86UW6 1770 aaPredicted RBP14.49□□□□□ -0.09
CHMP2A-202ENST00000596708 MYH14Q7Z406 1995 aaKnown RBP14.49□□□□□ -0.09
CHMP2A-202ENST00000596708 GOLGB1Q14789 3259 aaKnown RBP14.49□□□□□ -0.09
CHMP2A-202ENST00000596708 HSP90AB1P08238 724 aaKnown RBP14.48□□□□□ -0.09
CHMP2A-202ENST00000596708 ATP10DQ9P241 1426 aa14.48□□□□□ -0.09
CHMP2A-202ENST00000596708 ERVV-2B6SEH9 535 aa14.47□□□□□ -0.09
CHMP2A-202ENST00000596708 TRAPPC3LQ5T215 181 aa14.47□□□□□ -0.09
CHMP2A-202ENST00000596708 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
CHMP2A-202ENST00000596708 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
CHMP2A-202ENST00000596708 KIF13BQ9NQT8 1826 aa14.47□□□□□ -0.09
CHMP2A-202ENST00000596708 COL5A3P25940 1745 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-202ENST00000596708 CABP4P57796 275 aa14.46□□□□□ -0.09
CHMP2A-202ENST00000596708 AMOTQ4VCS5 1084 aa14.46□□□□□ -0.09
CHMP2A-202ENST00000596708 ZNF530Q6P9A1 599 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-202ENST00000596708 DCAF5Q96JK2 942 aa14.46□□□□□ -0.09
CHMP2A-202ENST00000596708 GPBP1L1Q9HC44 474 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-202ENST00000596708 ZNF831Q5JPB2 1677 aa14.46□□□□□ -0.1
CHMP2A-202ENST00000596708 MMP10P09238 476 aa14.45□□□□□ -0.1
CHMP2A-202ENST00000596708 ZNF526Q8TF50 670 aaPredicted RBP14.45□□□□□ -0.1
CHMP2A-202ENST00000596708 PLEKHG2Q9H7P9 1386 aa14.45□□□□□ -0.1
CHMP2A-202ENST00000596708 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
CHMP2A-202ENST00000596708 MTHFSP49914 203 aa14.44□□□□□ -0.1
CHMP2A-202ENST00000596708 C1orf141Q5JVX7 400 aa14.44□□□□□ -0.1
CHMP2A-202ENST00000596708 SLC4A9Q96Q91 983 aa14.44□□□□□ -0.1
CHMP2A-202ENST00000596708 RFC4P35249 363 aa14.43□□□□□ -0.1
CHMP2A-202ENST00000596708 RC3H1Q5TC82 1133 aaKnown RBP14.43□□□□□ -0.1
CHMP2A-202ENST00000596708 NLGN1Q8N2Q7 840 aa14.43□□□□□ -0.1
CHMP2A-202ENST00000596708 CCER1Q8TC90 406 aaPredicted RBP14.43□□□□□ -0.1
CHMP2A-202ENST00000596708 ARHGEF1Q92888 912 aaKnown RBP14.43□□□□□ -0.1
CHMP2A-202ENST00000596708 KNSTRNQ9Y448 316 aa14.43□□□□□ -0.1
CHMP2A-202ENST00000596708 KDRP35968 1356 aa14.43□□□□□ -0.1
CHMP2A-202ENST00000596708 CICQ96RK0 1608 aaPredicted RBP14.42□□□□□ -0.1
CHMP2A-202ENST00000596708 C4AP0C0L4 1744 aa14.42□□□□□ -0.1
CHMP2A-202ENST00000596708 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
CHMP2A-202ENST00000596708 SULT6B1Q6IMI4 303 aa14.42□□□□□ -0.1
CHMP2A-202ENST00000596708 AEBP1Q8IUX7 1158 aa14.42□□□□□ -0.1
CHMP2A-202ENST00000596708 KDM6AO15550 1401 aaPredicted RBP14.41□□□□□ -0.1
CHMP2A-202ENST00000596708 KIAA1551Q9HCM1 1747 aa14.41□□□□□ -0.1
CHMP2A-202ENST00000596708 PTCD1O75127 700 aaKnown RBP14.41□□□□□ -0.1
CHMP2A-202ENST00000596708 ADRA2BP18089 450 aa14.41□□□□□ -0.1
CHMP2A-202ENST00000596708 NFATC2IPQ8NCF5 419 aa14.41□□□□□ -0.1
CHMP2A-202ENST00000596708 CNTNAP4Q9C0A0 1308 aa14.41□□□□□ -0.1
CHMP2A-202ENST00000596708 BRCA1P38398 1863 aaKnown RBP14.4□□□□□ -0.1
CHMP2A-202ENST00000596708 ADCY9O60503 1353 aa14.4□□□□□ -0.1
CHMP2A-202ENST00000596708 TGFB2P61812 414 aa14.4□□□□□ -0.1
CHMP2A-202ENST00000596708 CCDC87Q9NVE4 849 aa14.4□□□□□ -0.1
CHMP2A-202ENST00000596708 BCS1LQ9Y276 419 aa14.4□□□□□ -0.1
CHMP2A-202ENST00000596708 PARP3Q9Y6F1 533 aa14.4□□□□□ -0.1
CHMP2A-202ENST00000596708 A0A0G2JLW4 131 aa14.39□□□□□ -0.11
CHMP2A-202ENST00000596708 GYS1P13807 737 aa14.39□□□□□ -0.11
CHMP2A-202ENST00000596708 ARFGEF1Q9Y6D6 1849 aa14.38□□□□□ -0.11
CHMP2A-202ENST00000596708 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
CHMP2A-202ENST00000596708 IL13P35225 146 aa14.38□□□□□ -0.11
CHMP2A-202ENST00000596708 TJP1Q07157 1748 aa14.38□□□□□ -0.11
CHMP2A-202ENST00000596708 CRKLP46109 303 aaKnown RBP14.37□□□□□ -0.11
CHMP2A-202ENST00000596708 ARHGAP27Q6ZUM4 889 aa14.37□□□□□ -0.11
CHMP2A-202ENST00000596708 FCHSD2O94868 740 aa14.36□□□□□ -0.11
CHMP2A-202ENST00000596708 DPEP1P16444 411 aa14.36□□□□□ -0.11
CHMP2A-202ENST00000596708 AKAP4Q5JQC9 854 aa14.36□□□□□ -0.11
CHMP2A-202ENST00000596708 C10orf71Q711Q0 1435 aa14.35□□□□□ -0.11
CHMP2A-202ENST00000596708 SRP68Q9UHB9 627 aaKnown RBP14.35□□□□□ -0.11
CHMP2A-202ENST00000596708 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
CHMP2A-202ENST00000596708 SBF1O95248 1867 aa14.34□□□□□ -0.11
CHMP2A-202ENST00000596708 HMOX1P09601 288 aa14.34□□□□□ -0.11
CHMP2A-202ENST00000596708 HSPA6P17066 643 aa14.34□□□□□ -0.11
CHMP2A-202ENST00000596708 LGR6Q9HBX8 967 aa14.34□□□□□ -0.11
CHMP2A-202ENST00000596708 CCDC88AQ3V6T2 1871 aa14.33□□□□□ -0.11
CHMP2A-202ENST00000596708 KIF3CO14782 793 aa14.33□□□□□ -0.12
CHMP2A-202ENST00000596708 FKBP8Q14318 412 aa14.33□□□□□ -0.12
CHMP2A-202ENST00000596708 AMER1Q5JTC6 1135 aaPredicted RBP14.33□□□□□ -0.12
CHMP2A-202ENST00000596708 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.12
CHMP2A-202ENST00000596708 RNMTO43148 476 aaKnown RBP14.32□□□□□ -0.12
CHMP2A-202ENST00000596708 ZPR1O75312 459 aa14.32□□□□□ -0.12
CHMP2A-202ENST00000596708 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
CHMP2A-202ENST00000596708 PIM2Q9P1W9 311 aa14.32□□□□□ -0.12
CHMP2A-202ENST00000596708 USP42Q9H9J4 1324 aaKnown RBP14.32□□□□□ -0.12
CHMP2A-202ENST00000596708 SLC39A6Q13433 755 aa14.31□□□□□ -0.12
CHMP2A-202ENST00000596708 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
CHMP2A-202ENST00000596708 CC2D1BQ5T0F9 858 aaKnown RBP14.31□□□□□ -0.12
CHMP2A-202ENST00000596708 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
CHMP2A-202ENST00000596708 KIF7Q2M1P5 1343 aa14.31□□□□□ -0.12
CHMP2A-202ENST00000596708 ADAMTS7Q9UKP4 1686 aa14.3□□□□□ -0.12
CHMP2A-202ENST00000596708 DIAPH1O60610 1272 aaKnown RBP14.3□□□□□ -0.12
CHMP2A-202ENST00000596708 KCNA3P22001 575 aa14.3□□□□□ -0.12
CHMP2A-202ENST00000596708 DDR1Q08345 913 aa14.3□□□□□ -0.12
CHMP2A-202ENST00000596708 USPL1Q5W0Q7 1092 aa14.3□□□□□ -0.12
CHMP2A-202ENST00000596708 MTHFSDQ2M296 383 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-202ENST00000596708 DALRD3Q5D0E6 543 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-202ENST00000596708 POLRMTO00411 1230 aaKnown RBP14.28□□□□□ -0.12
CHMP2A-202ENST00000596708 CYP19A1P11511 503 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-202ENST00000596708 TM4SF1P30408 202 aa14.28□□□□□ -0.12
CHMP2A-202ENST00000596708 CHRNA5P30532 468 aa14.28□□□□□ -0.12
CHMP2A-202ENST00000596708 C9orf131Q5VYM1 1079 aa14.28□□□□□ -0.12
CHMP2A-202ENST00000596708 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.12
CHMP2A-202ENST00000596708 PER1O15534 1290 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms