RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 TRAK2O60296 914 aa10.73□□□□□ -0.69
SIN3B-208ENST00000596638 FCHSD2O94868 740 aa10.73□□□□□ -0.69
SIN3B-208ENST00000596638 XRCC6P12956 609 aaKnown RBP eCLIP10.73□□□□□ -0.69
SIN3B-208ENST00000596638 TNNT2P45379 298 aaPredicted RBP10.73□□□□□ -0.69
SIN3B-208ENST00000596638 SKOR2Q2VWA4 1001 aaPredicted RBP10.73□□□□□ -0.69
SIN3B-208ENST00000596638 FAM196AQ6ZSG2 479 aa10.73□□□□□ -0.69
SIN3B-208ENST00000596638 ARHGEF25Q86VW2 580 aa10.73□□□□□ -0.69
SIN3B-208ENST00000596638 GCC1Q96CN9 775 aa10.73□□□□□ -0.69
SIN3B-208ENST00000596638 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
SIN3B-208ENST00000596638 A0A1W2PP64 1363 aa10.73□□□□□ -0.69
SIN3B-208ENST00000596638 KIF24Q5T7B8 1368 aa10.73□□□□□ -0.69
SIN3B-208ENST00000596638 CALD1Q05682 793 aaKnown RBP10.72□□□□□ -0.69
SIN3B-208ENST00000596638 R3HDM1Q15032 1099 aaKnown RBP10.72□□□□□ -0.69
SIN3B-208ENST00000596638 BMP2KLQ5H9B9 411 aa10.72□□□□□ -0.69
SIN3B-208ENST00000596638 BCL2L13Q9BXK5 485 aa10.72□□□□□ -0.69
SIN3B-208ENST00000596638 NOB1Q9ULX3 412 aaKnown RBP10.72□□□□□ -0.69
SIN3B-208ENST00000596638 PHRF1Q9P1Y6 1649 aaKnown RBP10.72□□□□□ -0.69
SIN3B-208ENST00000596638 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
SIN3B-208ENST00000596638 DIAPH1O60610 1272 aaKnown RBP10.71□□□□□ -0.69
SIN3B-208ENST00000596638 APBA3O96018 575 aa10.71□□□□□ -0.69
SIN3B-208ENST00000596638 CLCN1P35523 988 aa10.71□□□□□ -0.69
SIN3B-208ENST00000596638 CPSF1Q10570 1443 aaKnown RBP10.71□□□□□ -0.69
SIN3B-208ENST00000596638 ITPRIPQ8IWB1 547 aa10.71□□□□□ -0.69
SIN3B-208ENST00000596638 TMEM57Q8N5G2 664 aa10.71□□□□□ -0.69
SIN3B-208ENST00000596638 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.69
SIN3B-208ENST00000596638 CD163L1Q9NR16 1453 aa10.71□□□□□ -0.69
SIN3B-208ENST00000596638 ITSN1Q15811 1721 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 NRKQ7Z2Y5 1582 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 AATKQ6ZMQ8 1374 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 FYB1O15117 783 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 SOX12O15370 315 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 MFAP1P55081 439 aaKnown RBP10.7□□□□□ -0.7
SIN3B-208ENST00000596638 RIPK4P57078 832 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 IFFO2Q5TF58 517 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 CLEC17AQ6ZS10 378 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 CHD1LQ86WJ1 897 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 RRAGDQ9NQL2 400 aaPredicted RBP10.7□□□□□ -0.7
SIN3B-208ENST00000596638 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
SIN3B-208ENST00000596638 KIF20BQ96Q89 1820 aa10.7□□□□□ -0.7
SIN3B-208ENST00000596638 LMO7Q8WWI1 1683 aa10.69□□□□□ -0.7
SIN3B-208ENST00000596638 COL5A2P05997 1499 aaPredicted RBP10.69□□□□□ -0.7
SIN3B-208ENST00000596638 HDGFL2Q7Z4V5 671 aaPredicted RBP10.69□□□□□ -0.7
SIN3B-208ENST00000596638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.69□□□□□ -0.7
SIN3B-208ENST00000596638 PROM2Q8N271 834 aa10.69□□□□□ -0.7
SIN3B-208ENST00000596638 UBE2Q2Q8WVN8 375 aa10.69□□□□□ -0.7
SIN3B-208ENST00000596638 GBP4Q96PP9 640 aa10.69□□□□□ -0.7
SIN3B-208ENST00000596638 FBLN1P23142 703 aa10.68□□□□□ -0.7
SIN3B-208ENST00000596638 RAB3GAP1Q15042 981 aa10.68□□□□□ -0.7
SIN3B-208ENST00000596638 TOM1L2Q6ZVM7 507 aa10.68□□□□□ -0.7
SIN3B-208ENST00000596638 NME9Q86XW9 330 aa10.68□□□□□ -0.7
SIN3B-208ENST00000596638 MARCH10Q8NA82 808 aaPredicted RBP10.68□□□□□ -0.7
SIN3B-208ENST00000596638 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
SIN3B-208ENST00000596638 DISP2A7MBM2 1401 aa10.67□□□□□ -0.7
SIN3B-208ENST00000596638 COL18A1P39060 1754 aa10.67□□□□□ -0.7
SIN3B-208ENST00000596638 U2SURPO15042 1029 aaKnown RBP10.67□□□□□ -0.7
SIN3B-208ENST00000596638 ZBTB7BO15156 539 aaPredicted RBP10.67□□□□□ -0.7
SIN3B-208ENST00000596638 MRPL50Q8N5N7 158 aaKnown RBP10.67□□□□□ -0.7
SIN3B-208ENST00000596638 SLIT3O75094 1523 aa10.67□□□□□ -0.7
SIN3B-208ENST00000596638 CRB1P82279 1406 aa10.67□□□□□ -0.7
SIN3B-208ENST00000596638 IBTKQ9P2D0 1353 aaPredicted RBP10.66□□□□□ -0.7
SIN3B-208ENST00000596638 ZNF853P0CG23 659 aa10.66□□□□□ -0.7
SIN3B-208ENST00000596638 NFE2L2Q16236 605 aa10.66□□□□□ -0.7
SIN3B-208ENST00000596638 GRPEL1Q9HAV7 217 aa10.66□□□□□ -0.7
SIN3B-208ENST00000596638 IFT57Q9NWB7 429 aa10.66□□□□□ -0.7
SIN3B-208ENST00000596638 ABCC4O15439 1325 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 WDR17Q8IZU2 1322 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 TTC21AQ8NDW8 1320 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 VAMP4O75379 141 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 GNAI1P63096 354 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 DDB1Q16531 1140 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 KCNH5Q8NCM2 988 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 TNPO1Q92973 898 aaKnown RBP10.65□□□□□ -0.7
SIN3B-208ENST00000596638 KIF2CQ99661 725 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 CARD10Q9BWT7 1032 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 API5Q9BZZ5 524 aaKnown RBP10.65□□□□□ -0.7
SIN3B-208ENST00000596638 GGNBP2Q9H3C7 697 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 PIK3C2AO00443 1686 aa10.65□□□□□ -0.7
SIN3B-208ENST00000596638 KCNQ2O43526 872 aa10.64□□□□□ -0.71
SIN3B-208ENST00000596638 HSP90AB1P08238 724 aaKnown RBP10.64□□□□□ -0.71
SIN3B-208ENST00000596638 LMOD3Q0VAK6 560 aa10.64□□□□□ -0.71
SIN3B-208ENST00000596638 PDGFDQ9GZP0 370 aaPredicted RBP10.64□□□□□ -0.71
SIN3B-208ENST00000596638 USP31Q70CQ4 1352 aa10.64□□□□□ -0.71
SIN3B-208ENST00000596638 K7ELQ4 463 aaPredicted RBP10.63□□□□□ -0.71
SIN3B-208ENST00000596638 PLSCR1O15162 318 aa10.63□□□□□ -0.71
SIN3B-208ENST00000596638 CDC45O75419 566 aa10.63□□□□□ -0.71
SIN3B-208ENST00000596638 LNPKQ9C0E8 428 aa10.63□□□□□ -0.71
SIN3B-208ENST00000596638 TNS1Q9HBL0 1735 aaKnown RBP10.63□□□□□ -0.71
SIN3B-208ENST00000596638 BCL11BQ9C0K0 894 aaPredicted RBP10.62□□□□□ -0.71
SIN3B-208ENST00000596638 GOLGA6L22H0YM25 854 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 EXOC5O00471 708 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 CSB-PGBD3P0DP91 1061 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 RABEP1Q15276 862 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 TBC1D9Q6ZT07 1266 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 PPP1R9BQ96SB3 815 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 POLKQ9UBT6 870 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 NFAT5O94916 1531 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 LRP5O75197 1615 aa10.61□□□□□ -0.71
SIN3B-208ENST00000596638 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms