RNA–Protein interactions for RNA: ENST00000595200.5

LIN7B-207, Transcript of lin-7 homolog B, crumbs cell polarity complex component, humanhuman

TSL 3

Gene LIN7B, Length 795 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7B-207ENST00000595200 COL24A1Q17RW2 1714 aa29.83■■■□□ 2.37
LIN7B-207ENST00000595200 DDX10Q13206 875 aaKnown RBP29.83■■■□□ 2.37
LIN7B-207ENST00000595200 AMIGO3Q86WK7 504 aa29.83■■■□□ 2.37
LIN7B-207ENST00000595200 NFATC2IPQ8NCF5 419 aa29.83■■■□□ 2.37
LIN7B-207ENST00000595200 LINC00116Q8NCU8 138 aa29.83■■■□□ 2.37
LIN7B-207ENST00000595200 COL23A1Q86Y22 540 aaPredicted RBP29.82■■■□□ 2.36
LIN7B-207ENST00000595200 PPP1R1BQ9UD71 204 aaPredicted RBP29.82■■■□□ 2.36
LIN7B-207ENST00000595200 RSPH6AQ9H0K4 717 aa29.81■■■□□ 2.36
LIN7B-207ENST00000595200 MRC1P22897 1456 aa29.8■■■□□ 2.36
LIN7B-207ENST00000595200 ZNF831Q5JPB2 1677 aa29.8■■■□□ 2.36
LIN7B-207ENST00000595200 RNMTO43148 476 aaKnown RBP29.8■■■□□ 2.36
LIN7B-207ENST00000595200 SLC16A10Q8TF71 515 aa29.8■■■□□ 2.36
LIN7B-207ENST00000595200 UBR3Q6ZT12 1888 aa29.8■■■□□ 2.36
LIN7B-207ENST00000595200 ATP6V1AP38606 617 aa29.79■■■□□ 2.36
LIN7B-207ENST00000595200 PHACTR3Q96KR7 559 aa29.78■■■□□ 2.36
LIN7B-207ENST00000595200 SMIM5Q71RC9 77 aa29.77■■■□□ 2.36
LIN7B-207ENST00000595200 SLC52A2Q9HAB3 445 aa29.77■■■□□ 2.36
LIN7B-207ENST00000595200 NUDCQ9Y266 331 aa29.77■■■□□ 2.36
LIN7B-207ENST00000595200 HMGB2P26583 209 aaKnown RBP29.76■■■□□ 2.35
LIN7B-207ENST00000595200 PRKAR2BP31323 418 aa29.76■■■□□ 2.35
LIN7B-207ENST00000595200 RBM42Q9BTD8 480 aaKnown RBP29.76■■■□□ 2.35
LIN7B-207ENST00000595200 AK7Q96M32 723 aa29.75■■■□□ 2.35
LIN7B-207ENST00000595200 COL5A3P25940 1745 aaPredicted RBP29.74■■■□□ 2.35
LIN7B-207ENST00000595200 U2AF1L5P0DN76 240 aaPredicted RBP29.74■■■□□ 2.35
LIN7B-207ENST00000595200 U2AF1Q01081 240 aaKnown RBP eCLIP29.74■■■□□ 2.35
LIN7B-207ENST00000595200 ZEB1P37275 1124 aaPredicted RBP29.72■■■□□ 2.35
LIN7B-207ENST00000595200 GAS2L2Q8NHY3 880 aa29.72■■■□□ 2.35
LIN7B-207ENST00000595200 MAP3K5Q99683 1374 aa29.72■■■□□ 2.35
LIN7B-207ENST00000595200 MSH5O43196 834 aa29.71■■■□□ 2.35
LIN7B-207ENST00000595200 PTCD1O75127 700 aaKnown RBP29.71■■■□□ 2.35
LIN7B-207ENST00000595200 ARXQ96QS3 562 aa29.71■■■□□ 2.35
LIN7B-207ENST00000595200 IL17REQ8NFR9 667 aa29.7■■■□□ 2.35
LIN7B-207ENST00000595200 TJP1Q07157 1748 aa29.7■■■□□ 2.34
LIN7B-207ENST00000595200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.69■■■□□ 2.34
LIN7B-207ENST00000595200 FCHSD2O94868 740 aa29.69■■■□□ 2.34
LIN7B-207ENST00000595200 PHF14O94880 888 aa29.69■■■□□ 2.34
LIN7B-207ENST00000595200 RALBP1Q15311 655 aa29.69■■■□□ 2.34
LIN7B-207ENST00000595200 FLAD1Q8NFF5 587 aa29.69■■■□□ 2.34
LIN7B-207ENST00000595200 FHDC1Q9C0D6 1143 aaPredicted RBP29.69■■■□□ 2.34
LIN7B-207ENST00000595200 CICQ96RK0 1608 aaPredicted RBP29.69■■■□□ 2.34
LIN7B-207ENST00000595200 GNAT3A8MTJ3 354 aa29.68■■■□□ 2.34
LIN7B-207ENST00000595200 GNPATO15228 680 aa29.68■■■□□ 2.34
LIN7B-207ENST00000595200 MYH14Q7Z406 1995 aaKnown RBP29.67■■■□□ 2.34
LIN7B-207ENST00000595200 SSFA2P28290 1259 aa29.67■■■□□ 2.34
LIN7B-207ENST00000595200 SLC39A6Q13433 755 aa29.67■■■□□ 2.34
LIN7B-207ENST00000595200 MSL1Q68DK7 614 aa29.67■■■□□ 2.34
LIN7B-207ENST00000595200 KCPQ6ZWJ8 1503 aa29.66■■■□□ 2.34
LIN7B-207ENST00000595200 SIPA1L3O60292 1781 aaPredicted RBP29.66■■■□□ 2.34
LIN7B-207ENST00000595200 SYT17Q9BSW7 474 aa29.65■■■□□ 2.34
LIN7B-207ENST00000595200 CNTNAP4Q9C0A0 1308 aa29.65■■■□□ 2.34
LIN7B-207ENST00000595200 CEMIPQ8WUJ3 1361 aa29.64■■■□□ 2.34
LIN7B-207ENST00000595200 POLD1P28340 1107 aa29.64■■■□□ 2.34
LIN7B-207ENST00000595200 RC3H1Q5TC82 1133 aaKnown RBP29.64■■■□□ 2.34
LIN7B-207ENST00000595200 UBR2Q8IWV8 1755 aa29.63■■■□□ 2.33
LIN7B-207ENST00000595200 CRKLP46109 303 aaKnown RBP29.59■■■□□ 2.33
LIN7B-207ENST00000595200 DNAJC10Q8IXB1 793 aa29.59■■■□□ 2.33
LIN7B-207ENST00000595200 PLEKHF1Q96S99 279 aa29.59■■■□□ 2.33
LIN7B-207ENST00000595200 RPS6KA4O75676 772 aa29.58■■■□□ 2.33
LIN7B-207ENST00000595200 MYBBP1AQ9BQG0 1328 aaKnown RBP29.58■■■□□ 2.33
LIN7B-207ENST00000595200 RTCBQ9Y3I0 505 aaKnown RBP29.58■■■□□ 2.33
LIN7B-207ENST00000595200 TEFQ10587 303 aa29.57■■■□□ 2.32
LIN7B-207ENST00000595200 INTS5Q6P9B9 1019 aaKnown RBP29.56■■■□□ 2.32
LIN7B-207ENST00000595200 TRAPPC3LQ5T215 181 aa29.55■■■□□ 2.32
LIN7B-207ENST00000595200 ARHGEF1Q92888 912 aaKnown RBP29.55■■■□□ 2.32
LIN7B-207ENST00000595200 C4AP0C0L4 1744 aa29.54■■■□□ 2.32
LIN7B-207ENST00000595200 MCM10Q7L590 875 aa29.54■■■□□ 2.32
LIN7B-207ENST00000595200 CYP19A1P11511 503 aaPredicted RBP29.53■■■□□ 2.32
LIN7B-207ENST00000595200 ADRA2BP18089 450 aa29.53■■■□□ 2.32
LIN7B-207ENST00000595200 DLG5Q8TDM6 1919 aa29.53■■■□□ 2.32
LIN7B-207ENST00000595200 DCTN1Q14203 1278 aa29.52■■■□□ 2.32
LIN7B-207ENST00000595200 ZNF790Q6PG37 636 aa29.52■■■□□ 2.32
LIN7B-207ENST00000595200 VSIG10Q8N0Z9 540 aa29.52■■■□□ 2.32
LIN7B-207ENST00000595200 KLHL34Q8N239 644 aa29.52■■■□□ 2.32
LIN7B-207ENST00000595200 NLGN2Q8NFZ4 835 aa29.51■■■□□ 2.31
LIN7B-207ENST00000595200 ZNF496Q96IT1 587 aaPredicted RBP29.51■■■□□ 2.31
LIN7B-207ENST00000595200 PRKRIP1Q9H875 184 aaPredicted RBP29.51■■■□□ 2.31
LIN7B-207ENST00000595200 KCNQ3O43525 872 aa29.5■■■□□ 2.31
LIN7B-207ENST00000595200 HTATSF1O43719 755 aaKnown RBP29.5■■■□□ 2.31
LIN7B-207ENST00000595200 TTC5Q8N0Z6 440 aa29.5■■■□□ 2.31
LIN7B-207ENST00000595200 CCDC87Q9NVE4 849 aa29.49■■■□□ 2.31
LIN7B-207ENST00000595200 RTF1Q92541 710 aaKnown RBP29.48■■■□□ 2.31
LIN7B-207ENST00000595200 BTBD11A6QL63 1104 aa29.47■■■□□ 2.31
LIN7B-207ENST00000595200 HEG1Q9ULI3 1381 aa29.47■■■□□ 2.31
LIN7B-207ENST00000595200 GYS1P13807 737 aa29.46■■■□□ 2.31
LIN7B-207ENST00000595200 RFC4P35249 363 aa29.46■■■□□ 2.31
LIN7B-207ENST00000595200 SOS1Q07889 1333 aaPredicted RBP29.45■■■□□ 2.31
LIN7B-207ENST00000595200 NFE2L2Q16236 605 aa29.45■■■□□ 2.31
LIN7B-207ENST00000595200 ZBTB1Q9Y2K1 713 aa29.45■■■□□ 2.31
LIN7B-207ENST00000595200 SRP68Q9UHB9 627 aaKnown RBP29.44■■■□□ 2.3
LIN7B-207ENST00000595200 NEFMP07197 916 aa29.43■■■□□ 2.3
LIN7B-207ENST00000595200 MMP10P09238 476 aa29.43■■■□□ 2.3
LIN7B-207ENST00000595200 USP42Q9H9J4 1324 aaKnown RBP29.43■■■□□ 2.3
LIN7B-207ENST00000595200 UTRNP46939 3433 aa29.42■■■□□ 2.3
LIN7B-207ENST00000595200 NLGN1Q8N2Q7 840 aa29.42■■■□□ 2.3
LIN7B-207ENST00000595200 FMNL2Q96PY5 1086 aa29.42■■■□□ 2.3
LIN7B-207ENST00000595200 ZNF316A6NFI3 1004 aaPredicted RBP29.41■■■□□ 2.3
LIN7B-207ENST00000595200 PNNQ9H307 717 aaKnown RBP29.41■■■□□ 2.3
LIN7B-207ENST00000595200 CD2APQ9Y5K6 639 aa29.41■■■□□ 2.3
LIN7B-207ENST00000595200 MAPK8IP3Q9UPT6 1336 aa29.41■■■□□ 2.3
LIN7B-207ENST00000595200 DCAF8L1A6NGE4 600 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms