RNA–Protein interactions for RNA: ENST00000595158.5

UBA52-204, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 3 BASIC

Gene UBA52, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-204	ENST00000595158	MTHFSD	Q2M296	383 aa	Known RBP	33.99	■■■■□ 3.03
UBA52-204	ENST00000595158	COL23A1	Q86Y22	540 aa	Predicted RBP	33.99	■■■■□ 3.03
UBA52-204	ENST00000595158	CFAP53	Q96M91	514 aa		33.99	■■■■□ 3.03
UBA52-204	ENST00000595158	LINC00116	Q8NCU8	138 aa		33.98	■■■■□ 3.03
UBA52-204	ENST00000595158	MRC1	P22897	1456 aa		33.98	■■■■□ 3.03
UBA52-204	ENST00000595158	UBR3	Q6ZT12	1888 aa		33.97	■■■■□ 3.03
UBA52-204	ENST00000595158	NFATC2IP	Q8NCF5	419 aa		33.96	■■■■□ 3.03
UBA52-204	ENST00000595158	SLC4A9	Q96Q91	983 aa		33.96	■■■■□ 3.03
UBA52-204	ENST00000595158	ATP6V1A	P38606	617 aa		33.95	■■■■□ 3.03
UBA52-204	ENST00000595158	AMIGO3	Q86WK7	504 aa		33.95	■■■■□ 3.03
UBA52-204	ENST00000595158	FLAD1	Q8NFF5	587 aa		33.93	■■■■□ 3.02
UBA52-204	ENST00000595158	AK7	Q96M32	723 aa		33.93	■■■■□ 3.02
UBA52-204	ENST00000595158	LGR6	Q9HBX8	967 aa		33.93	■■■■□ 3.02
UBA52-204	ENST00000595158	VIRMA	Q69YN4	1812 aa	Known RBP	33.93	■■■■□ 3.02
UBA52-204	ENST00000595158	ARX	Q96QS3	562 aa		33.92	■■■■□ 3.02
UBA52-204	ENST00000595158	COL5A3	P25940	1745 aa	Predicted RBP	33.91	■■■■□ 3.02
UBA52-204	ENST00000595158	CIC	Q96RK0	1608 aa	Predicted RBP	33.91	■■■■□ 3.02
UBA52-204	ENST00000595158	RNMT	O43148	476 aa	Known RBP	33.91	■■■■□ 3.02
UBA52-204	ENST00000595158	MAP3K5	Q99683	1374 aa		33.9	■■■■□ 3.02
UBA52-204	ENST00000595158	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.9	■■■■□ 3.02
UBA52-204	ENST00000595158	RSPH6A	Q9H0K4	717 aa		33.9	■■■■□ 3.02
UBA52-204	ENST00000595158	SLC52A2	Q9HAB3	445 aa		33.9	■■■■□ 3.02
UBA52-204	ENST00000595158	RBM42	Q9BTD8	480 aa	Known RBP	33.88	■■■■□ 3.01
UBA52-204	ENST00000595158	NUDC	Q9Y266	331 aa		33.88	■■■■□ 3.01
UBA52-204	ENST00000595158	MSH5	O43196	834 aa		33.87	■■■■□ 3.01
UBA52-204	ENST00000595158	SSFA2	P28290	1259 aa		33.87	■■■■□ 3.01
UBA52-204	ENST00000595158	SYT17	Q9BSW7	474 aa		33.87	■■■■□ 3.01
UBA52-204	ENST00000595158	POLD1	P28340	1107 aa		33.86	■■■■□ 3.01
UBA52-204	ENST00000595158	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.85	■■■■□ 3.01
UBA52-204	ENST00000595158	PRKAR2B	P31323	418 aa		33.85	■■■■□ 3.01
UBA52-204	ENST00000595158	SMIM5	Q71RC9	77 aa		33.85	■■■■□ 3.01
UBA52-204	ENST00000595158	GAS2L2	Q8NHY3	880 aa		33.85	■■■■□ 3.01
UBA52-204	ENST00000595158	PHACTR3	Q96KR7	559 aa		33.84	■■■■□ 3.01
UBA52-204	ENST00000595158	TJP1	Q07157	1748 aa		33.84	■■■■□ 3.01
UBA52-204	ENST00000595158	GNPAT	O15228	680 aa		33.83	■■■■□ 3.01
UBA52-204	ENST00000595158	CNTNAP4	Q9C0A0	1308 aa		33.82	■■■■□ 3.01
UBA52-204	ENST00000595158	PTCD1	O75127	700 aa	Known RBP	33.82	■■■■□ 3
UBA52-204	ENST00000595158	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.82	■■■■□ 3
UBA52-204	ENST00000595158	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.82	■■■■□ 3
UBA52-204	ENST00000595158	PHF14	O94880	888 aa		33.81	■■■■□ 3
UBA52-204	ENST00000595158	DDX10	Q13206	875 aa	Known RBP	33.81	■■■■□ 3
UBA52-204	ENST00000595158	RC3H1	Q5TC82	1133 aa	Known RBP	33.81	■■■■□ 3
UBA52-204	ENST00000595158	MSL1	Q68DK7	614 aa		33.8	■■■■□ 3
UBA52-204	ENST00000595158	KCP	Q6ZWJ8	1503 aa		33.79	■■■■□ 3
UBA52-204	ENST00000595158	GNAT3	A8MTJ3	354 aa		33.79	■■■■□ 3
UBA52-204	ENST00000595158	FCHSD2	O94868	740 aa		33.79	■■■■□ 3
UBA52-204	ENST00000595158	IL17RE	Q8NFR9	667 aa		33.78	■■■■□ 3
UBA52-204	ENST00000595158	SIPA1L3	O60292	1781 aa	Predicted RBP	33.77	■■■■□ 3
UBA52-204	ENST00000595158	MYH14	Q7Z406	1995 aa	Known RBP	33.76	■■■■□ 3
UBA52-204	ENST00000595158	CEMIP	Q8WUJ3	1361 aa		33.76	■■■■□ 3
UBA52-204	ENST00000595158	UBR2	Q8IWV8	1755 aa		33.76	■■■■□ 3
UBA52-204	ENST00000595158	SLC39A6	Q13433	755 aa		33.75	■■■□□ 2.99
UBA52-204	ENST00000595158	RALBP1	Q15311	655 aa		33.75	■■■□□ 2.99
UBA52-204	ENST00000595158	RTCB	Q9Y3I0	505 aa	Known RBP	33.74	■■■□□ 2.99
UBA52-204	ENST00000595158	RPS6KA4	O75676	772 aa		33.72	■■■□□ 2.99
UBA52-204	ENST00000595158	ADRA2B	P18089	450 aa		33.72	■■■□□ 2.99
UBA52-204	ENST00000595158	CRKL	P46109	303 aa	Known RBP	33.71	■■■□□ 2.99
UBA52-204	ENST00000595158	ZEB1	P37275	1124 aa	Predicted RBP	33.7	■■■□□ 2.99
UBA52-204	ENST00000595158	TRAPPC3L	Q5T215	181 aa		33.69	■■■□□ 2.98
UBA52-204	ENST00000595158	C4A	P0C0L4	1744 aa		33.69	■■■□□ 2.98
UBA52-204	ENST00000595158	TEF	Q10587	303 aa		33.68	■■■□□ 2.98
UBA52-204	ENST00000595158	DNAJC10	Q8IXB1	793 aa		33.68	■■■□□ 2.98
UBA52-204	ENST00000595158	DCAF8L1	A6NGE4	600 aa		33.67	■■■□□ 2.98
UBA52-204	ENST00000595158	ARHGEF1	Q92888	912 aa	Known RBP	33.67	■■■□□ 2.98
UBA52-204	ENST00000595158	INTS5	Q6P9B9	1019 aa	Known RBP	33.66	■■■□□ 2.98
UBA52-204	ENST00000595158	VSIG10	Q8N0Z9	540 aa		33.66	■■■□□ 2.98
UBA52-204	ENST00000595158	KLHL34	Q8N239	644 aa		33.66	■■■□□ 2.98
UBA52-204	ENST00000595158	NLGN2	Q8NFZ4	835 aa		33.64	■■■□□ 2.98
UBA52-204	ENST00000595158	CYP19A1	P11511	503 aa	Predicted RBP	33.63	■■■□□ 2.97
UBA52-204	ENST00000595158	ZNF790	Q6PG37	636 aa		33.63	■■■□□ 2.97
UBA52-204	ENST00000595158	PLEKHF1	Q96S99	279 aa		33.63	■■■□□ 2.97
UBA52-204	ENST00000595158	CCDC87	Q9NVE4	849 aa		33.62	■■■□□ 2.97
UBA52-204	ENST00000595158	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.61	■■■□□ 2.97
UBA52-204	ENST00000595158	TTC5	Q8N0Z6	440 aa		33.61	■■■□□ 2.97
UBA52-204	ENST00000595158	HTATSF1	O43719	755 aa	Known RBP	33.6	■■■□□ 2.97
UBA52-204	ENST00000595158	ZNF496	Q96IT1	587 aa	Predicted RBP	33.6	■■■□□ 2.97
UBA52-204	ENST00000595158	CD2AP	Q9Y5K6	639 aa		33.6	■■■□□ 2.97
UBA52-204	ENST00000595158	GYS1	P13807	737 aa		33.59	■■■□□ 2.97
UBA52-204	ENST00000595158	RFC4	P35249	363 aa		33.59	■■■□□ 2.97
UBA52-204	ENST00000595158	MCM10	Q7L590	875 aa		33.58	■■■□□ 2.97
UBA52-204	ENST00000595158	NLGN1	Q8N2Q7	840 aa		33.58	■■■□□ 2.97
UBA52-204	ENST00000595158	HEG1	Q9ULI3	1381 aa		33.58	■■■□□ 2.97
UBA52-204	ENST00000595158	SOS1	Q07889	1333 aa	Predicted RBP	33.57	■■■□□ 2.97
UBA52-204	ENST00000595158	RTF1	Q92541	710 aa	Known RBP	33.57	■■■□□ 2.96
UBA52-204	ENST00000595158	MMP10	P09238	476 aa		33.56	■■■□□ 2.96
UBA52-204	ENST00000595158	USP42	Q9H9J4	1324 aa	Known RBP	33.55	■■■□□ 2.96
UBA52-204	ENST00000595158	DLG5	Q8TDM6	1919 aa		33.55	■■■□□ 2.96
UBA52-204	ENST00000595158	BTBD11	A6QL63	1104 aa		33.54	■■■□□ 2.96
UBA52-204	ENST00000595158	DCTN1	Q14203	1278 aa		33.54	■■■□□ 2.96
UBA52-204	ENST00000595158	ZBTB1	Q9Y2K1	713 aa		33.54	■■■□□ 2.96
UBA52-204	ENST00000595158	KCNQ3	O43525	872 aa		33.53	■■■□□ 2.96
UBA52-204	ENST00000595158	NEFM	P07197	916 aa		33.52	■■■□□ 2.96
UBA52-204	ENST00000595158	FMNL2	Q96PY5	1086 aa		33.52	■■■□□ 2.96
UBA52-204	ENST00000595158	SRP68	Q9UHB9	627 aa	Known RBP	33.52	■■■□□ 2.96
UBA52-204	ENST00000595158	PNN	Q9H307	717 aa	Known RBP	33.51	■■■□□ 2.95
UBA52-204	ENST00000595158	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.51	■■■□□ 2.95
UBA52-204	ENST00000595158	NFE2L2	Q16236	605 aa		33.5	■■■□□ 2.95
UBA52-204	ENST00000595158	COL15A1	P39059	1388 aa		33.49	■■■□□ 2.95
UBA52-204	ENST00000595158	KIF13B	Q9NQT8	1826 aa		33.49	■■■□□ 2.95
UBA52-204	ENST00000595158	STARD3NL	O95772	234 aa		33.49	■■■□□ 2.95

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms