RNA–Protein interactions for RNA: ENST00000594537.2

LTBP4-211, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-211ENST00000594537 TAF7Q15545 349 aaPredicted RBP30.27■■■□□ 2.44
LTBP4-211ENST00000594537 KAT6BQ8WYB5 2073 aa30.27■■■□□ 2.44
LTBP4-211ENST00000594537 WDR63Q8IWG1 891 aa30.26■■■□□ 2.43
LTBP4-211ENST00000594537 SMARCC1Q92922 1105 aaPredicted RBP30.26■■■□□ 2.43
LTBP4-211ENST00000594537 IL16Q14005 1332 aa30.25■■■□□ 2.43
LTBP4-211ENST00000594537 TNS1Q9HBL0 1735 aaKnown RBP30.25■■■□□ 2.43
LTBP4-211ENST00000594537 BTAF1O14981 1849 aa30.24■■■□□ 2.43
LTBP4-211ENST00000594537 SF3B2Q13435 895 aaKnown RBP30.24■■■□□ 2.43
LTBP4-211ENST00000594537 PLSCR1O15162 318 aa30.22■■■□□ 2.43
LTBP4-211ENST00000594537 THUMPD2Q9BTF0 503 aaKnown RBP30.22■■■□□ 2.43
LTBP4-211ENST00000594537 ZNF521Q96K83 1311 aa30.22■■■□□ 2.43
LTBP4-211ENST00000594537 BTBD11A6QL63 1104 aa30.21■■■□□ 2.43
LTBP4-211ENST00000594537 IFT57Q9NWB7 429 aa30.21■■■□□ 2.43
LTBP4-211ENST00000594537 PAPPAQ13219 1627 aa30.21■■■□□ 2.43
LTBP4-211ENST00000594537 RGPD3A6NKT7 1758 aaPredicted RBP30.2■■■□□ 2.43
LTBP4-211ENST00000594537 RGPD4Q7Z3J3 1758 aa30.2■■■□□ 2.43
LTBP4-211ENST00000594537 HNRNPUQ00839 825 aaKnown RBP eCLIP30.2■■■□□ 2.43
LTBP4-211ENST00000594537 CFAP44Q96MT7 982 aa30.2■■■□□ 2.43
LTBP4-211ENST00000594537 GNAI1P63096 354 aa30.19■■■□□ 2.42
LTBP4-211ENST00000594537 APBA3O96018 575 aa30.18■■■□□ 2.42
LTBP4-211ENST00000594537 HMGB2P26583 209 aaKnown RBP30.18■■■□□ 2.42
LTBP4-211ENST00000594537 PTF1AQ7RTS3 328 aa30.18■■■□□ 2.42
LTBP4-211ENST00000594537 UPF1Q92900 1129 aaKnown RBP eCLIP30.18■■■□□ 2.42
LTBP4-211ENST00000594537 ATG3Q9NT62 314 aa30.18■■■□□ 2.42
LTBP4-211ENST00000594537 SALL2Q9Y467 1007 aaPredicted RBP30.18■■■□□ 2.42
LTBP4-211ENST00000594537 CHL1O00533 1208 aa30.17■■■□□ 2.42
LTBP4-211ENST00000594537 BAG6P46379 1132 aa30.17■■■□□ 2.42
LTBP4-211ENST00000594537 ZNF790Q6PG37 636 aa30.17■■■□□ 2.42
LTBP4-211ENST00000594537 TTC5Q8N0Z6 440 aa30.17■■■□□ 2.42
LTBP4-211ENST00000594537 ZNF853P0CG23 659 aa30.16■■■□□ 2.42
LTBP4-211ENST00000594537 PALLDQ8WX93 1383 aa30.15■■■□□ 2.42
LTBP4-211ENST00000594537 ASAP1Q9ULH1 1129 aa30.15■■■□□ 2.42
LTBP4-211ENST00000594537 KDM3BQ7LBC6 1761 aa30.14■■■□□ 2.42
LTBP4-211ENST00000594537 TSPYL4Q9UJ04 414 aa30.14■■■□□ 2.42
LTBP4-211ENST00000594537 ZBED9Q6R2W3 1325 aa30.14■■■□□ 2.42
LTBP4-211ENST00000594537 UBR2Q8IWV8 1755 aa30.13■■■□□ 2.41
LTBP4-211ENST00000594537 ZNF831Q5JPB2 1677 aa30.12■■■□□ 2.41
LTBP4-211ENST00000594537 SENP3-EIF4A1A0A087X0R7 540 aa30.12■■■□□ 2.41
LTBP4-211ENST00000594537 GOLGA2Q08379 1002 aa30.12■■■□□ 2.41
LTBP4-211ENST00000594537 LY75O60449 1722 aa30.12■■■□□ 2.41
LTBP4-211ENST00000594537 SLC27A3Q5K4L6 730 aa30.11■■■□□ 2.41
LTBP4-211ENST00000594537 SLC39A6Q13433 755 aa30.1■■■□□ 2.41
LTBP4-211ENST00000594537 VSIG10Q8N0Z9 540 aa30.1■■■□□ 2.41
LTBP4-211ENST00000594537 MYH16Q9H6N6 1097 aa30.1■■■□□ 2.41
LTBP4-211ENST00000594537 KCPQ6ZWJ8 1503 aa30.1■■■□□ 2.41
LTBP4-211ENST00000594537 FMNL2Q96PY5 1086 aa30.09■■■□□ 2.41
LTBP4-211ENST00000594537 E9PSI1 815 aa30.08■■■□□ 2.41
LTBP4-211ENST00000594537 LAS1LQ9Y4W2 734 aaKnown RBP30.08■■■□□ 2.41
LTBP4-211ENST00000594537 CICQ96RK0 1608 aaPredicted RBP30.07■■■□□ 2.4
LTBP4-211ENST00000594537 LOC102724428A0A0B4J2F2 783 aa30.07■■■□□ 2.4
LTBP4-211ENST00000594537 SIK1P57059 783 aa30.07■■■□□ 2.4
LTBP4-211ENST00000594537 MBIPQ9NS73 344 aa30.07■■■□□ 2.4
LTBP4-211ENST00000594537 CAMKK2Q96RR4 588 aa30.06■■■□□ 2.4
LTBP4-211ENST00000594537 MIS18AQ9NYP9 233 aa30.06■■■□□ 2.4
LTBP4-211ENST00000594537 HEG1Q9ULI3 1381 aa30.05■■■□□ 2.4
LTBP4-211ENST00000594537 EIF4A1P60842 406 aaKnown RBP30.05■■■□□ 2.4
LTBP4-211ENST00000594537 ZNF496Q96IT1 587 aaPredicted RBP30.05■■■□□ 2.4
LTBP4-211ENST00000594537 TEX13AQ9BXU3 409 aaPredicted RBP30.05■■■□□ 2.4
LTBP4-211ENST00000594537 PTCD1O75127 700 aaKnown RBP30.04■■■□□ 2.4
LTBP4-211ENST00000594537 TXNRD1Q16881 649 aa30.04■■■□□ 2.4
LTBP4-211ENST00000594537 RBM42Q9BTD8 480 aaKnown RBP30.04■■■□□ 2.4
LTBP4-211ENST00000594537 SOS1Q07889 1333 aaPredicted RBP30.03■■■□□ 2.4
LTBP4-211ENST00000594537 KCNQ3O43525 872 aa30.03■■■□□ 2.4
LTBP4-211ENST00000594537 CCNL1Q9UK58 526 aaPredicted RBP30.03■■■□□ 2.4
LTBP4-211ENST00000594537 EN1Q05925 392 aaPredicted RBP30.02■■■□□ 2.4
LTBP4-211ENST00000594537 SLFN5Q08AF3 891 aa30.02■■■□□ 2.4
LTBP4-211ENST00000594537 SNRPA1P09661 255 aaKnown RBP30.01■■■□□ 2.39
LTBP4-211ENST00000594537 FANCIQ9NVI1 1328 aa30■■■□□ 2.39
LTBP4-211ENST00000594537 HOXB7P09629 217 aa30■■■□□ 2.39
LTBP4-211ENST00000594537 ATP6V1AP38606 617 aa30■■■□□ 2.39
LTBP4-211ENST00000594537 RREB1Q92766 1687 aa29.99■■■□□ 2.39
LTBP4-211ENST00000594537 DEFB132Q7Z7B7 95 aa29.99■■■□□ 2.39
LTBP4-211ENST00000594537 TRMT2AQ8IZ69 625 aaKnown RBP29.99■■■□□ 2.39
LTBP4-211ENST00000594537 PROM2Q8N271 834 aa29.99■■■□□ 2.39
LTBP4-211ENST00000594537 CHMP4AQ9BY43 222 aa29.99■■■□□ 2.39
LTBP4-211ENST00000594537 SPINK5Q9NQ38 1064 aaPredicted RBP29.99■■■□□ 2.39
LTBP4-211ENST00000594537 EZH2Q15910 746 aaKnown RBP29.98■■■□□ 2.39
LTBP4-211ENST00000594537 SLC4A9Q96Q91 983 aa29.98■■■□□ 2.39
LTBP4-211ENST00000594537 SOCS7O14512 581 aa29.97■■■□□ 2.39
LTBP4-211ENST00000594537 GIGYF1O75420 1035 aaPredicted RBP29.97■■■□□ 2.39
LTBP4-211ENST00000594537 C5P01031 1676 aa29.96■■■□□ 2.39
LTBP4-211ENST00000594537 TSR2Q969E8 191 aaKnown RBP29.96■■■□□ 2.39
LTBP4-211ENST00000594537 STARD3NLO95772 234 aa29.95■■■□□ 2.39
LTBP4-211ENST00000594537 LRRC4BQ9NT99 713 aa29.95■■■□□ 2.39
LTBP4-211ENST00000594537 TJP1Q07157 1748 aa29.95■■■□□ 2.38
LTBP4-211ENST00000594537 ITPK1Q13572 414 aa29.93■■■□□ 2.38
LTBP4-211ENST00000594537 CDCA7LQ96GN5 454 aa29.93■■■□□ 2.38
LTBP4-211ENST00000594537 TAF1LQ8IZX4 1826 aa29.93■■■□□ 2.38
LTBP4-211ENST00000594537 COL5A3P25940 1745 aaPredicted RBP29.93■■■□□ 2.38
LTBP4-211ENST00000594537 RC3H1Q5TC82 1133 aaKnown RBP29.92■■■□□ 2.38
LTBP4-211ENST00000594537 LAMB4A4D0S4 1761 aa29.92■■■□□ 2.38
LTBP4-211ENST00000594537 DUSP27Q5VZP5 1158 aa29.91■■■□□ 2.38
LTBP4-211ENST00000594537 DNAJC10Q8IXB1 793 aa29.91■■■□□ 2.38
LTBP4-211ENST00000594537 CNTNAP4Q9C0A0 1308 aa29.91■■■□□ 2.38
LTBP4-211ENST00000594537 NUP188Q5SRE5 1749 aa29.9■■■□□ 2.38
LTBP4-211ENST00000594537 CT47B1P0C2W7 299 aaPredicted RBP29.89■■■□□ 2.38
LTBP4-211ENST00000594537 CYP19A1P11511 503 aaPredicted RBP29.89■■■□□ 2.38
LTBP4-211ENST00000594537 ERBB4Q15303 1308 aa29.89■■■□□ 2.38
LTBP4-211ENST00000594537 LINC00116Q8NCU8 138 aa29.88■■■□□ 2.37
LTBP4-211ENST00000594537 YTHDC1Q96MU7 727 aaKnown RBP29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms