RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 RBM42Q9BTD8 480 aaKnown RBP23.23■■□□□ 1.31
IRF3-208ENST00000594387 ATG3Q9NT62 314 aa23.23■■□□□ 1.31
IRF3-208ENST00000594387 PNPLA7Q6ZV29 1317 aa23.23■■□□□ 1.31
IRF3-208ENST00000594387 NFATC2IPQ8NCF5 419 aa23.22■■□□□ 1.31
IRF3-208ENST00000594387 KDM6AO15550 1401 aaPredicted RBP23.22■■□□□ 1.31
IRF3-208ENST00000594387 DDX10Q13206 875 aaKnown RBP23.2■■□□□ 1.3
IRF3-208ENST00000594387 MTHFSDQ2M296 383 aaKnown RBP23.2■■□□□ 1.3
IRF3-208ENST00000594387 GAS2L2Q8NHY3 880 aa23.2■■□□□ 1.3
IRF3-208ENST00000594387 U2AF1L5P0DN76 240 aaPredicted RBP23.19■■□□□ 1.3
IRF3-208ENST00000594387 PTGER2P43116 358 aa23.19■■□□□ 1.3
IRF3-208ENST00000594387 U2AF1Q01081 240 aaKnown RBP eCLIP23.19■■□□□ 1.3
IRF3-208ENST00000594387 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
IRF3-208ENST00000594387 UBR3Q6ZT12 1888 aa23.18■■□□□ 1.3
IRF3-208ENST00000594387 NEFMP07197 916 aa23.18■■□□□ 1.3
IRF3-208ENST00000594387 RNMTO43148 476 aaKnown RBP23.17■■□□□ 1.3
IRF3-208ENST00000594387 COL23A1Q86Y22 540 aaPredicted RBP23.17■■□□□ 1.3
IRF3-208ENST00000594387 ARXQ96QS3 562 aa23.17■■□□□ 1.3
IRF3-208ENST00000594387 RALBP1Q15311 655 aa23.16■■□□□ 1.3
IRF3-208ENST00000594387 SLC52A2Q9HAB3 445 aa23.16■■□□□ 1.3
IRF3-208ENST00000594387 GNAT3A8MTJ3 354 aa23.15■■□□□ 1.3
IRF3-208ENST00000594387 PRKAR2BP31323 418 aa23.15■■□□□ 1.3
IRF3-208ENST00000594387 LGR6Q9HBX8 967 aa23.15■■□□□ 1.3
IRF3-208ENST00000594387 PTCD1O75127 700 aaKnown RBP23.14■■□□□ 1.29
IRF3-208ENST00000594387 FCHSD2O94868 740 aa23.14■■□□□ 1.29
IRF3-208ENST00000594387 PHF14O94880 888 aa23.14■■□□□ 1.29
IRF3-208ENST00000594387 LINC00116Q8NCU8 138 aa23.14■■□□□ 1.29
IRF3-208ENST00000594387 COL24A1Q17RW2 1714 aa23.13■■□□□ 1.29
IRF3-208ENST00000594387 GNPATO15228 680 aa23.13■■□□□ 1.29
IRF3-208ENST00000594387 SSFA2P28290 1259 aa23.13■■□□□ 1.29
IRF3-208ENST00000594387 ITPK1Q13572 414 aa23.13■■□□□ 1.29
IRF3-208ENST00000594387 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
IRF3-208ENST00000594387 TEFQ10587 303 aa23.12■■□□□ 1.29
IRF3-208ENST00000594387 KLHL34Q8N239 644 aa23.12■■□□□ 1.29
IRF3-208ENST00000594387 SGIP1Q9BQI5 828 aa23.12■■□□□ 1.29
IRF3-208ENST00000594387 MAP3K5Q99683 1374 aa23.12■■□□□ 1.29
IRF3-208ENST00000594387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.11■■□□□ 1.29
IRF3-208ENST00000594387 FHDC1Q9C0D6 1143 aaPredicted RBP23.11■■□□□ 1.29
IRF3-208ENST00000594387 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
IRF3-208ENST00000594387 PNNQ9H307 717 aaKnown RBP23.11■■□□□ 1.29
IRF3-208ENST00000594387 RTCBQ9Y3I0 505 aaKnown RBP23.11■■□□□ 1.29
IRF3-208ENST00000594387 ADAMTS7Q9UKP4 1686 aa23.09■■□□□ 1.29
IRF3-208ENST00000594387 TRAPPC3LQ5T215 181 aa23.09■■□□□ 1.29
IRF3-208ENST00000594387 RC3H1Q5TC82 1133 aaKnown RBP23.09■■□□□ 1.29
IRF3-208ENST00000594387 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
IRF3-208ENST00000594387 RTF1Q92541 710 aaKnown RBP23.09■■□□□ 1.29
IRF3-208ENST00000594387 SYT17Q9BSW7 474 aa23.09■■□□□ 1.29
IRF3-208ENST00000594387 MRC1P22897 1456 aa23.07■■□□□ 1.28
IRF3-208ENST00000594387 MSL1Q68DK7 614 aa23.07■■□□□ 1.28
IRF3-208ENST00000594387 PHACTR3Q96KR7 559 aa23.07■■□□□ 1.28
IRF3-208ENST00000594387 SLC4A9Q96Q91 983 aa23.06■■□□□ 1.28
IRF3-208ENST00000594387 CNTNAP4Q9C0A0 1308 aa23.06■■□□□ 1.28
IRF3-208ENST00000594387 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
IRF3-208ENST00000594387 ADRA2BP18089 450 aa23.05■■□□□ 1.28
IRF3-208ENST00000594387 SLC39A6Q13433 755 aa23.05■■□□□ 1.28
IRF3-208ENST00000594387 RPS6KA4O75676 772 aa23.04■■□□□ 1.28
IRF3-208ENST00000594387 TJP1Q07157 1748 aa23.04■■□□□ 1.28
IRF3-208ENST00000594387 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
IRF3-208ENST00000594387 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
IRF3-208ENST00000594387 RFC4P35249 363 aa23.03■■□□□ 1.28
IRF3-208ENST00000594387 IL17REQ8NFR9 667 aa23.03■■□□□ 1.28
IRF3-208ENST00000594387 CICQ96RK0 1608 aaPredicted RBP23.03■■□□□ 1.28
IRF3-208ENST00000594387 MYBBP1AQ9BQG0 1328 aaKnown RBP23.03■■□□□ 1.28
IRF3-208ENST00000594387 MAPK8IP3Q9UPT6 1336 aa23.02■■□□□ 1.28
IRF3-208ENST00000594387 SRCAPQ6ZRS2 3230 aa23.01■■□□□ 1.27
IRF3-208ENST00000594387 HTATSF1O43719 755 aaKnown RBP23.01■■□□□ 1.27
IRF3-208ENST00000594387 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
IRF3-208ENST00000594387 SMIM5Q71RC9 77 aa23.01■■□□□ 1.27
IRF3-208ENST00000594387 VSIG10Q8N0Z9 540 aa23.01■■□□□ 1.27
IRF3-208ENST00000594387 UBR2Q8IWV8 1755 aa23.01■■□□□ 1.27
IRF3-208ENST00000594387 BTBD11A6QL63 1104 aa22.99■■□□□ 1.27
IRF3-208ENST00000594387 AMIGO3Q86WK7 504 aa22.99■■□□□ 1.27
IRF3-208ENST00000594387 DNAJC10Q8IXB1 793 aa22.99■■□□□ 1.27
IRF3-208ENST00000594387 NLGN1Q8N2Q7 840 aa22.99■■□□□ 1.27
IRF3-208ENST00000594387 ZNF790Q6PG37 636 aa22.98■■□□□ 1.27
IRF3-208ENST00000594387 ARHGEF1Q92888 912 aaKnown RBP22.98■■□□□ 1.27
IRF3-208ENST00000594387 TEX13AQ9BXU3 409 aaPredicted RBP22.98■■□□□ 1.27
IRF3-208ENST00000594387 CCDC87Q9NVE4 849 aa22.98■■□□□ 1.27
IRF3-208ENST00000594387 STARD3NLO95772 234 aa22.97■■□□□ 1.27
IRF3-208ENST00000594387 CEMIPQ8WUJ3 1361 aa22.97■■□□□ 1.27
IRF3-208ENST00000594387 C4AP0C0L4 1744 aa22.96■■□□□ 1.27
IRF3-208ENST00000594387 GPR162Q16538 588 aa22.96■■□□□ 1.27
IRF3-208ENST00000594387 FMNL2Q96PY5 1086 aa22.96■■□□□ 1.27
IRF3-208ENST00000594387 KCPQ6ZWJ8 1503 aa22.96■■□□□ 1.27
IRF3-208ENST00000594387 CHD4Q14839 1912 aa22.95■■□□□ 1.26
IRF3-208ENST00000594387 MCM10Q7L590 875 aa22.95■■□□□ 1.26
IRF3-208ENST00000594387 NPM2Q86SE8 214 aaKnown RBP22.95■■□□□ 1.26
IRF3-208ENST00000594387 CD2APQ9Y5K6 639 aa22.95■■□□□ 1.26
IRF3-208ENST00000594387 ZPR1O75312 459 aa22.94■■□□□ 1.26
IRF3-208ENST00000594387 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
IRF3-208ENST00000594387 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
IRF3-208ENST00000594387 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
IRF3-208ENST00000594387 HEG1Q9ULI3 1381 aa22.92■■□□□ 1.26
IRF3-208ENST00000594387 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
IRF3-208ENST00000594387 INTS5Q6P9B9 1019 aaKnown RBP22.92■■□□□ 1.26
IRF3-208ENST00000594387 ZNF496Q96IT1 587 aaPredicted RBP22.92■■□□□ 1.26
IRF3-208ENST00000594387 MMP10P09238 476 aa22.91■■□□□ 1.26
IRF3-208ENST00000594387 DCTN1Q14203 1278 aa22.91■■□□□ 1.26
IRF3-208ENST00000594387 PLEKHF1Q96S99 279 aa22.91■■□□□ 1.26
IRF3-208ENST00000594387 PRKRIP1Q9H875 184 aaPredicted RBP22.91■■□□□ 1.26
IRF3-208ENST00000594387 PARP3Q9Y6F1 533 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms