RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 KIF16BQ96L93 1317 aa26.7■■□□□ 1.86
PNKP-203ENST00000593946 BTBD11A6QL63 1104 aa26.7■■□□□ 1.86
PNKP-203ENST00000593946 SLC52A2Q9HAB3 445 aa26.7■■□□□ 1.86
PNKP-203ENST00000593946 THRAP3Q9Y2W1 955 aaKnown RBP26.7■■□□□ 1.86
PNKP-203ENST00000593946 BCL9LQ86UU0 1499 aa26.69■■□□□ 1.86
PNKP-203ENST00000593946 NKX1-1Q15270 411 aaPredicted RBP26.69■■□□□ 1.86
PNKP-203ENST00000593946 C8orf37Q96NL8 207 aa26.69■■□□□ 1.86
PNKP-203ENST00000593946 CRBNQ96SW2 442 aa26.69■■□□□ 1.86
PNKP-203ENST00000593946 SOS1Q07889 1333 aaPredicted RBP26.69■■□□□ 1.86
PNKP-203ENST00000593946 SPATA31A5Q5VU36 1347 aa26.69■■□□□ 1.86
PNKP-203ENST00000593946 SPATA31A7Q8IWB4 1347 aa26.69■■□□□ 1.86
PNKP-203ENST00000593946 UNC5CLQ8IV45 518 aa26.68■■□□□ 1.86
PNKP-203ENST00000593946 FNBP4Q8N3X1 1017 aaPredicted RBP26.68■■□□□ 1.86
PNKP-203ENST00000593946 NGLY1Q96IV0 654 aa26.68■■□□□ 1.86
PNKP-203ENST00000593946 TOGARAM1Q9Y4F4 1720 aa26.67■■□□□ 1.86
PNKP-203ENST00000593946 ZKSCAN2Q63HK3 967 aa26.67■■□□□ 1.86
PNKP-203ENST00000593946 MRPL50Q8N5N7 158 aaKnown RBP26.67■■□□□ 1.86
PNKP-203ENST00000593946 EIF4A1P60842 406 aaKnown RBP26.66■■□□□ 1.86
PNKP-203ENST00000593946 CDCA7Q9BWT1 371 aaPredicted RBP26.65■■□□□ 1.86
PNKP-203ENST00000593946 TNS2Q63HR2 1409 aa26.65■■□□□ 1.86
PNKP-203ENST00000593946 NOB1Q9ULX3 412 aaKnown RBP26.65■■□□□ 1.86
PNKP-203ENST00000593946 KCNQ3O43525 872 aa26.64■■□□□ 1.85
PNKP-203ENST00000593946 DDX54Q8TDD1 881 aaKnown RBP26.64■■□□□ 1.85
PNKP-203ENST00000593946 ATF7IPQ6VMQ6 1270 aa26.63■■□□□ 1.85
PNKP-203ENST00000593946 NFATC2IPQ8NCF5 419 aa26.63■■□□□ 1.85
PNKP-203ENST00000593946 IPO8O15397 1037 aaKnown RBP26.62■■□□□ 1.85
PNKP-203ENST00000593946 PANK1Q8TE04 598 aa26.62■■□□□ 1.85
PNKP-203ENST00000593946 TNNQ9UQP3 1299 aa26.62■■□□□ 1.85
PNKP-203ENST00000593946 HEG1Q9ULI3 1381 aa26.62■■□□□ 1.85
PNKP-203ENST00000593946 TCERG1O14776 1098 aaKnown RBP26.62■■□□□ 1.85
PNKP-203ENST00000593946 TRIM27P14373 513 aa26.62■■□□□ 1.85
PNKP-203ENST00000593946 BARGINQ6ZT62 677 aa26.62■■□□□ 1.85
PNKP-203ENST00000593946 ERVV-2B6SEH9 535 aa26.61■■□□□ 1.85
PNKP-203ENST00000593946 HOXB7P09629 217 aa26.61■■□□□ 1.85
PNKP-203ENST00000593946 RLBP1P12271 317 aa26.61■■□□□ 1.85
PNKP-203ENST00000593946 VPS72Q15906 364 aa26.61■■□□□ 1.85
PNKP-203ENST00000593946 PAPPAQ13219 1627 aa26.61■■□□□ 1.85
PNKP-203ENST00000593946 ITGB4P16144 1822 aa26.6■■□□□ 1.85
PNKP-203ENST00000593946 MS4A1P11836 297 aa26.6■■□□□ 1.85
PNKP-203ENST00000593946 ARHGAP45Q92619 1136 aa26.6■■□□□ 1.85
PNKP-203ENST00000593946 CABP4P57796 275 aa26.59■■□□□ 1.85
PNKP-203ENST00000593946 EXOC5O00471 708 aa26.59■■□□□ 1.85
PNKP-203ENST00000593946 ZNF790Q6PG37 636 aa26.59■■□□□ 1.85
PNKP-203ENST00000593946 DZIP1LQ8IYY4 767 aaKnown RBP26.59■■□□□ 1.85
PNKP-203ENST00000593946 CCDC9Q9Y3X0 531 aaKnown RBP26.59■■□□□ 1.85
PNKP-203ENST00000593946 UBR2Q8IWV8 1755 aa26.58■■□□□ 1.85
PNKP-203ENST00000593946 CLUAP1Q96AJ1 413 aa26.58■■□□□ 1.85
PNKP-203ENST00000593946 C5P01031 1676 aa26.57■■□□□ 1.84
PNKP-203ENST00000593946 MEX3CQ5U5Q3 659 aaKnown RBP26.56■■□□□ 1.84
PNKP-203ENST00000593946 CCDC30Q5VVM6 783 aa26.56■■□□□ 1.84
PNKP-203ENST00000593946 FTSJ3Q8IY81 847 aaKnown RBP26.56■■□□□ 1.84
PNKP-203ENST00000593946 USP21Q9UK80 565 aa26.56■■□□□ 1.84
PNKP-203ENST00000593946 COG6Q9Y2V7 657 aa26.56■■□□□ 1.84
PNKP-203ENST00000593946 SLC39A6Q13433 755 aa26.56■■□□□ 1.84
PNKP-203ENST00000593946 B4GALNT3Q6L9W6 998 aa26.55■■□□□ 1.84
PNKP-203ENST00000593946 GLI3P10071 1580 aa26.54■■□□□ 1.84
PNKP-203ENST00000593946 KAT6BQ8WYB5 2073 aa26.54■■□□□ 1.84
PNKP-203ENST00000593946 GIGYF1O75420 1035 aaPredicted RBP26.53■■□□□ 1.84
PNKP-203ENST00000593946 DDB1Q16531 1140 aa26.53■■□□□ 1.84
PNKP-203ENST00000593946 DOT1LQ8TEK3 1739 aa26.53■■□□□ 1.84
PNKP-203ENST00000593946 SLC4A2P04920 1241 aa26.53■■□□□ 1.84
PNKP-203ENST00000593946 HDGFL1Q5TGJ6 251 aa26.53■■□□□ 1.84
PNKP-203ENST00000593946 STK31Q9BXU1 1019 aa26.53■■□□□ 1.84
PNKP-203ENST00000593946 CHMP4AQ9BY43 222 aa26.53■■□□□ 1.84
PNKP-203ENST00000593946 MVPQ14764 893 aaKnown RBP26.52■■□□□ 1.84
PNKP-203ENST00000593946 CCDC136Q96JN2 1154 aa26.52■■□□□ 1.84
PNKP-203ENST00000593946 PTPRCP08575 1304 aa26.52■■□□□ 1.84
PNKP-203ENST00000593946 RGS12O14924 1447 aa26.51■■□□□ 1.83
PNKP-203ENST00000593946 THSD7AQ9UPZ6 1657 aa26.51■■□□□ 1.83
PNKP-203ENST00000593946 LAMB4A4D0S4 1761 aa26.51■■□□□ 1.83
PNKP-203ENST00000593946 AFF2P51816 1311 aa26.51■■□□□ 1.83
PNKP-203ENST00000593946 TTC5Q8N0Z6 440 aa26.51■■□□□ 1.83
PNKP-203ENST00000593946 API5Q9BZZ5 524 aaKnown RBP26.51■■□□□ 1.83
PNKP-203ENST00000593946 ABCC4O15439 1325 aa26.5■■□□□ 1.83
PNKP-203ENST00000593946 NECTIN2Q92692 538 aa26.5■■□□□ 1.83
PNKP-203ENST00000593946 ZNF496Q96IT1 587 aaPredicted RBP26.49■■□□□ 1.83
PNKP-203ENST00000593946 KCPQ6ZWJ8 1503 aa26.49■■□□□ 1.83
PNKP-203ENST00000593946 FAM98CQ17RN3 349 aaKnown RBP26.48■■□□□ 1.83
PNKP-203ENST00000593946 TMEM57Q8N5G2 664 aa26.48■■□□□ 1.83
PNKP-203ENST00000593946 TMOD3Q9NYL9 352 aa26.48■■□□□ 1.83
PNKP-203ENST00000593946 ATRNO75882 1429 aa26.47■■□□□ 1.83
PNKP-203ENST00000593946 EIF2S2P20042 333 aaKnown RBP26.47■■□□□ 1.83
PNKP-203ENST00000593946 AAMPQ13685 434 aa26.47■■□□□ 1.83
PNKP-203ENST00000593946 G2E3Q7L622 706 aa26.47■■□□□ 1.83
PNKP-203ENST00000593946 FMNL2Q96PY5 1086 aa26.47■■□□□ 1.83
PNKP-203ENST00000593946 N4BP2Q86UW6 1770 aaPredicted RBP26.46■■□□□ 1.83
PNKP-203ENST00000593946 PRAMEF22A3QJZ6 481 aa26.45■■□□□ 1.83
PNKP-203ENST00000593946 BCL9O00512 1426 aa26.45■■□□□ 1.82
PNKP-203ENST00000593946 ITPRIPQ8IWB1 547 aa26.45■■□□□ 1.82
PNKP-203ENST00000593946 MARCH10Q8NA82 808 aaPredicted RBP26.45■■□□□ 1.82
PNKP-203ENST00000593946 DDX19BQ9UMR2 479 aa26.45■■□□□ 1.82
PNKP-203ENST00000593946 FLIIQ13045 1269 aa26.44■■□□□ 1.82
PNKP-203ENST00000593946 CHPF2Q9P2E5 772 aa26.44■■□□□ 1.82
PNKP-203ENST00000593946 SNRPA1P09661 255 aaKnown RBP26.43■■□□□ 1.82
PNKP-203ENST00000593946 PIGBQ92521 554 aa26.43■■□□□ 1.82
PNKP-203ENST00000593946 GJD4Q96KN9 370 aaPredicted RBP26.42■■□□□ 1.82
PNKP-203ENST00000593946 DBF4Q9UBU7 674 aaPredicted RBP26.42■■□□□ 1.82
PNKP-203ENST00000593946 TRPC5Q9UL62 973 aaPredicted RBP26.41■■□□□ 1.82
PNKP-203ENST00000593946 INTS3Q68E01 1043 aaKnown RBP26.39■■□□□ 1.82
PNKP-203ENST00000593946 PHAXQ9H814 394 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms