RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
H3F3B-213ENST00000593254 SSFA2P28290 1259 aa18.11■□□□□ 0.49
H3F3B-213ENST00000593254 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
H3F3B-213ENST00000593254 APLP1P51693 650 aa18.11■□□□□ 0.49
H3F3B-213ENST00000593254 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
H3F3B-213ENST00000593254 DNAJC5GQ8N7S2 189 aa18.11■□□□□ 0.49
H3F3B-213ENST00000593254 KIAA1551Q9HCM1 1747 aa18.1■□□□□ 0.49
H3F3B-213ENST00000593254 KIF7Q2M1P5 1343 aa18.1■□□□□ 0.49
H3F3B-213ENST00000593254 CACNB1Q02641 598 aaPredicted RBP18.1■□□□□ 0.49
H3F3B-213ENST00000593254 EYA1Q99502 592 aa18.1■□□□□ 0.49
H3F3B-213ENST00000593254 PHF14O94880 888 aa18.09■□□□□ 0.49
H3F3B-213ENST00000593254 PIGBQ92521 554 aa18.09■□□□□ 0.49
H3F3B-213ENST00000593254 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
H3F3B-213ENST00000593254 TOMM70O94826 608 aa18.07■□□□□ 0.48
H3F3B-213ENST00000593254 EIF4A2Q14240 407 aaKnown RBP18.07■□□□□ 0.48
H3F3B-213ENST00000593254 NKX1-1Q15270 411 aaPredicted RBP18.07■□□□□ 0.48
H3F3B-213ENST00000593254 LINC00116Q8NCU8 138 aa18.07■□□□□ 0.48
H3F3B-213ENST00000593254 KNSTRNQ9Y448 316 aa18.07■□□□□ 0.48
H3F3B-213ENST00000593254 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
H3F3B-213ENST00000593254 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
H3F3B-213ENST00000593254 SIK1P57059 783 aa18.06■□□□□ 0.48
H3F3B-213ENST00000593254 N4BP2Q86UW6 1770 aaPredicted RBP18.06■□□□□ 0.48
H3F3B-213ENST00000593254 PLEKHG2Q9H7P9 1386 aa18.05■□□□□ 0.48
H3F3B-213ENST00000593254 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
H3F3B-213ENST00000593254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.48
H3F3B-213ENST00000593254 BRCA1P38398 1863 aaKnown RBP18.04■□□□□ 0.48
H3F3B-213ENST00000593254 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-213ENST00000593254 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
H3F3B-213ENST00000593254 WDR90Q96KV7 1748 aa18.03■□□□□ 0.48
H3F3B-213ENST00000593254 GNPATO15228 680 aa18.02■□□□□ 0.48
H3F3B-213ENST00000593254 MMP10P09238 476 aa18.02■□□□□ 0.48
H3F3B-213ENST00000593254 TGFB2P61812 414 aa18.02■□□□□ 0.48
H3F3B-213ENST00000593254 ITPK1Q13572 414 aa18.02■□□□□ 0.48
H3F3B-213ENST00000593254 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
H3F3B-213ENST00000593254 PER1O15534 1290 aaPredicted RBP18■□□□□ 0.47
H3F3B-213ENST00000593254 NMRK2Q9NPI5 230 aa18■□□□□ 0.47
H3F3B-213ENST00000593254 ASAP1Q9ULH1 1129 aa18■□□□□ 0.47
H3F3B-213ENST00000593254 BCS1LQ9Y276 419 aa17.99■□□□□ 0.47
H3F3B-213ENST00000593254 ARFGEF1Q9Y6D6 1849 aa17.99■□□□□ 0.47
H3F3B-213ENST00000593254 A0A0G2JLW4 131 aa17.98■□□□□ 0.47
H3F3B-213ENST00000593254 PHKG2P15735 406 aa17.98■□□□□ 0.47
H3F3B-213ENST00000593254 ATP6V1AP38606 617 aa17.98■□□□□ 0.47
H3F3B-213ENST00000593254 IFNL2Q8IZJ0 200 aa17.98■□□□□ 0.47
H3F3B-213ENST00000593254 RBM46Q8TBY0 533 aaKnown RBP17.98■□□□□ 0.47
H3F3B-213ENST00000593254 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
H3F3B-213ENST00000593254 ZNF831Q5JPB2 1677 aa17.98■□□□□ 0.47
H3F3B-213ENST00000593254 JMYQ8N9B5 988 aa17.97■□□□□ 0.47
H3F3B-213ENST00000593254 C4AP0C0L4 1744 aa17.97■□□□□ 0.47
H3F3B-213ENST00000593254 KDRP35968 1356 aa17.96■□□□□ 0.47
H3F3B-213ENST00000593254 ARHGAP27Q6ZUM4 889 aa17.96■□□□□ 0.47
H3F3B-213ENST00000593254 NLGN1Q8N2Q7 840 aa17.96■□□□□ 0.47
H3F3B-213ENST00000593254 KLRG1Q96E93 195 aa17.96■□□□□ 0.47
H3F3B-213ENST00000593254 DPEP1P16444 411 aa17.95■□□□□ 0.46
H3F3B-213ENST00000593254 ATG3Q9NT62 314 aa17.95■□□□□ 0.46
H3F3B-213ENST00000593254 COL5A3P25940 1745 aaPredicted RBP17.95■□□□□ 0.46
H3F3B-213ENST00000593254 NPC1L1Q9UHC9 1359 aa17.94■□□□□ 0.46
H3F3B-213ENST00000593254 IL13P35225 146 aa17.94■□□□□ 0.46
H3F3B-213ENST00000593254 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
H3F3B-213ENST00000593254 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
H3F3B-213ENST00000593254 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
H3F3B-213ENST00000593254 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
H3F3B-213ENST00000593254 FCHSD2O94868 740 aa17.93■□□□□ 0.46
H3F3B-213ENST00000593254 KCNA3P22001 575 aa17.93■□□□□ 0.46
H3F3B-213ENST00000593254 HTRA3P83110 453 aa17.93■□□□□ 0.46
H3F3B-213ENST00000593254 FSTL1Q12841 308 aa17.93■□□□□ 0.46
H3F3B-213ENST00000593254 SLC4A9Q96Q91 983 aa17.93■□□□□ 0.46
H3F3B-213ENST00000593254 CCDC87Q9NVE4 849 aa17.93■□□□□ 0.46
H3F3B-213ENST00000593254 RTCBQ9Y3I0 505 aaKnown RBP17.93■□□□□ 0.46
H3F3B-213ENST00000593254 GYS1P13807 737 aa17.92■□□□□ 0.46
H3F3B-213ENST00000593254 MTHFSP49914 203 aa17.92■□□□□ 0.46
H3F3B-213ENST00000593254 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
H3F3B-213ENST00000593254 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
H3F3B-213ENST00000593254 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
H3F3B-213ENST00000593254 RC3H1Q5TC82 1133 aaKnown RBP17.92■□□□□ 0.46
H3F3B-213ENST00000593254 C9orf131Q5VYM1 1079 aa17.92■□□□□ 0.46
H3F3B-213ENST00000593254 ARHGEF1Q92888 912 aaKnown RBP17.92■□□□□ 0.46
H3F3B-213ENST00000593254 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
H3F3B-213ENST00000593254 SBF1O95248 1867 aa17.92■□□□□ 0.46
H3F3B-213ENST00000593254 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
H3F3B-213ENST00000593254 KCPQ6ZWJ8 1503 aa17.9■□□□□ 0.46
H3F3B-213ENST00000593254 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
H3F3B-213ENST00000593254 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
H3F3B-213ENST00000593254 DCAF5Q96JK2 942 aa17.9■□□□□ 0.46
H3F3B-213ENST00000593254 CNTNAP4Q9C0A0 1308 aa17.9■□□□□ 0.46
H3F3B-213ENST00000593254 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.46
H3F3B-213ENST00000593254 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
H3F3B-213ENST00000593254 C16orf71Q8IYS4 520 aaPredicted RBP17.89■□□□□ 0.45
H3F3B-213ENST00000593254 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.45
H3F3B-213ENST00000593254 SCN11AQ9UI33 1791 aa17.89■□□□□ 0.45
H3F3B-213ENST00000593254 RPS6KA4O75676 772 aa17.88■□□□□ 0.45
H3F3B-213ENST00000593254 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
H3F3B-213ENST00000593254 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
H3F3B-213ENST00000593254 RFC4P35249 363 aa17.87■□□□□ 0.45
H3F3B-213ENST00000593254 PIM2Q9P1W9 311 aa17.87■□□□□ 0.45
H3F3B-213ENST00000593254 KDM2BQ8NHM5 1336 aa17.87■□□□□ 0.45
H3F3B-213ENST00000593254 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
H3F3B-213ENST00000593254 DALRD3Q5D0E6 543 aaKnown RBP17.85■□□□□ 0.45
H3F3B-213ENST00000593254 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
H3F3B-213ENST00000593254 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
H3F3B-213ENST00000593254 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms