RNA–Protein interactions for RNA: ENST00000593112.1

BECN1-219, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-219ENST00000593112 LINC00116Q8NCU8 138 aa23.66■■□□□ 1.38
BECN1-219ENST00000593112 MYH14Q7Z406 1995 aaKnown RBP23.65■■□□□ 1.38
BECN1-219ENST00000593112 SLC16A10Q8TF71 515 aa23.65■■□□□ 1.38
BECN1-219ENST00000593112 SLC4A9Q96Q91 983 aa23.65■■□□□ 1.38
BECN1-219ENST00000593112 PPP2R1AP30153 589 aa23.63■■□□□ 1.37
BECN1-219ENST00000593112 FHDC1Q9C0D6 1143 aaPredicted RBP23.63■■□□□ 1.37
BECN1-219ENST00000593112 MRC1P22897 1456 aa23.62■■□□□ 1.37
BECN1-219ENST00000593112 TJP1Q07157 1748 aa23.62■■□□□ 1.37
BECN1-219ENST00000593112 U2SURPO15042 1029 aaKnown RBP23.62■■□□□ 1.37
BECN1-219ENST00000593112 CABP4P57796 275 aa23.62■■□□□ 1.37
BECN1-219ENST00000593112 MTHFSDQ2M296 383 aaKnown RBP23.62■■□□□ 1.37
BECN1-219ENST00000593112 AKAP4Q5JQC9 854 aa23.62■■□□□ 1.37
BECN1-219ENST00000593112 ARXQ96QS3 562 aa23.62■■□□□ 1.37
BECN1-219ENST00000593112 ATP6V1AP38606 617 aa23.61■■□□□ 1.37
BECN1-219ENST00000593112 NFATC2IPQ8NCF5 419 aa23.61■■□□□ 1.37
BECN1-219ENST00000593112 LGR6Q9HBX8 967 aa23.61■■□□□ 1.37
BECN1-219ENST00000593112 MSH5O43196 834 aa23.6■■□□□ 1.37
BECN1-219ENST00000593112 AK7Q96M32 723 aa23.6■■□□□ 1.37
BECN1-219ENST00000593112 CICQ96RK0 1608 aaPredicted RBP23.59■■□□□ 1.37
BECN1-219ENST00000593112 SYT17Q9BSW7 474 aa23.59■■□□□ 1.37
BECN1-219ENST00000593112 SIPA1L3O60292 1781 aaPredicted RBP23.58■■□□□ 1.37
BECN1-219ENST00000593112 MSL1Q68DK7 614 aa23.58■■□□□ 1.37
BECN1-219ENST00000593112 RBM42Q9BTD8 480 aaKnown RBP23.58■■□□□ 1.37
BECN1-219ENST00000593112 RNMTO43148 476 aaKnown RBP23.57■■□□□ 1.36
BECN1-219ENST00000593112 PHF14O94880 888 aa23.57■■□□□ 1.36
BECN1-219ENST00000593112 UBR2Q8IWV8 1755 aa23.55■■□□□ 1.36
BECN1-219ENST00000593112 MAP3K5Q99683 1374 aa23.55■■□□□ 1.36
BECN1-219ENST00000593112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.55■■□□□ 1.36
BECN1-219ENST00000593112 CFAP53Q96M91 514 aa23.55■■□□□ 1.36
BECN1-219ENST00000593112 SLC52A2Q9HAB3 445 aa23.55■■□□□ 1.36
BECN1-219ENST00000593112 C4AP0C0L4 1744 aa23.55■■□□□ 1.36
BECN1-219ENST00000593112 PTCD1O75127 700 aaKnown RBP23.54■■□□□ 1.36
BECN1-219ENST00000593112 FLAD1Q8NFF5 587 aa23.54■■□□□ 1.36
BECN1-219ENST00000593112 RSPH6AQ9H0K4 717 aa23.54■■□□□ 1.36
BECN1-219ENST00000593112 GNPATO15228 680 aa23.53■■□□□ 1.36
BECN1-219ENST00000593112 HMGB2P26583 209 aaKnown RBP23.53■■□□□ 1.36
BECN1-219ENST00000593112 SSFA2P28290 1259 aa23.53■■□□□ 1.36
BECN1-219ENST00000593112 POLD1P28340 1107 aa23.53■■□□□ 1.36
BECN1-219ENST00000593112 PHACTR3Q96KR7 559 aa23.53■■□□□ 1.36
BECN1-219ENST00000593112 KCPQ6ZWJ8 1503 aa23.52■■□□□ 1.36
BECN1-219ENST00000593112 PRKAR2BP31323 418 aa23.51■■□□□ 1.35
BECN1-219ENST00000593112 SLC39A6Q13433 755 aa23.5■■□□□ 1.35
BECN1-219ENST00000593112 DLG5Q8TDM6 1919 aa23.5■■□□□ 1.35
BECN1-219ENST00000593112 KLHL34Q8N239 644 aa23.49■■□□□ 1.35
BECN1-219ENST00000593112 CNTNAP4Q9C0A0 1308 aa23.49■■□□□ 1.35
BECN1-219ENST00000593112 U2AF1L5P0DN76 240 aaPredicted RBP23.48■■□□□ 1.35
BECN1-219ENST00000593112 U2AF1Q01081 240 aaKnown RBP eCLIP23.48■■□□□ 1.35
BECN1-219ENST00000593112 IL17REQ8NFR9 667 aa23.48■■□□□ 1.35
BECN1-219ENST00000593112 DDX10Q13206 875 aaKnown RBP23.47■■□□□ 1.35
BECN1-219ENST00000593112 RC3H1Q5TC82 1133 aaKnown RBP23.47■■□□□ 1.35
BECN1-219ENST00000593112 NLGN2Q8NFZ4 835 aa23.47■■□□□ 1.35
BECN1-219ENST00000593112 GAS2L2Q8NHY3 880 aa23.47■■□□□ 1.35
BECN1-219ENST00000593112 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
BECN1-219ENST00000593112 CHD4Q14839 1912 aa23.47■■□□□ 1.35
BECN1-219ENST00000593112 UTRNP46939 3433 aa23.46■■□□□ 1.35
BECN1-219ENST00000593112 GNAT3A8MTJ3 354 aa23.46■■□□□ 1.35
BECN1-219ENST00000593112 CRKLP46109 303 aaKnown RBP23.45■■□□□ 1.34
BECN1-219ENST00000593112 RTCBQ9Y3I0 505 aaKnown RBP23.45■■□□□ 1.34
BECN1-219ENST00000593112 RPS6KA4O75676 772 aa23.44■■□□□ 1.34
BECN1-219ENST00000593112 DNAJC10Q8IXB1 793 aa23.44■■□□□ 1.34
BECN1-219ENST00000593112 CEMIPQ8WUJ3 1361 aa23.43■■□□□ 1.34
BECN1-219ENST00000593112 ARHGEF1Q92888 912 aaKnown RBP23.43■■□□□ 1.34
BECN1-219ENST00000593112 GOLGB1Q14789 3259 aaKnown RBP23.43■■□□□ 1.34
BECN1-219ENST00000593112 FCHSD2O94868 740 aa23.42■■□□□ 1.34
BECN1-219ENST00000593112 KIF13BQ9NQT8 1826 aa23.41■■□□□ 1.34
BECN1-219ENST00000593112 TRAPPC3LQ5T215 181 aa23.41■■□□□ 1.34
BECN1-219ENST00000593112 INTS5Q6P9B9 1019 aaKnown RBP23.41■■□□□ 1.34
BECN1-219ENST00000593112 DCAF8L1A6NGE4 600 aa23.4■■□□□ 1.34
BECN1-219ENST00000593112 KIAA1551Q9HCM1 1747 aa23.39■■□□□ 1.34
BECN1-219ENST00000593112 CYP19A1P11511 503 aaPredicted RBP23.38■■□□□ 1.33
BECN1-219ENST00000593112 ADRA2BP18089 450 aa23.38■■□□□ 1.33
BECN1-219ENST00000593112 TEFQ10587 303 aa23.38■■□□□ 1.33
BECN1-219ENST00000593112 GYS1P13807 737 aa23.37■■□□□ 1.33
BECN1-219ENST00000593112 MMP10P09238 476 aa23.36■■□□□ 1.33
BECN1-219ENST00000593112 MCM10Q7L590 875 aa23.36■■□□□ 1.33
BECN1-219ENST00000593112 ZNF496Q96IT1 587 aaPredicted RBP23.36■■□□□ 1.33
BECN1-219ENST00000593112 CCDC87Q9NVE4 849 aa23.36■■□□□ 1.33
BECN1-219ENST00000593112 SRP68Q9UHB9 627 aaKnown RBP23.36■■□□□ 1.33
BECN1-219ENST00000593112 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
BECN1-219ENST00000593112 KCNQ3O43525 872 aa23.35■■□□□ 1.33
BECN1-219ENST00000593112 YY1P25490 414 aa23.35■■□□□ 1.33
BECN1-219ENST00000593112 RFC4P35249 363 aa23.35■■□□□ 1.33
BECN1-219ENST00000593112 DCTN1Q14203 1278 aa23.35■■□□□ 1.33
BECN1-219ENST00000593112 RALBP1Q15311 655 aa23.35■■□□□ 1.33
BECN1-219ENST00000593112 ZNF790Q6PG37 636 aa23.35■■□□□ 1.33
BECN1-219ENST00000593112 PLEKHF1Q96S99 279 aa23.35■■□□□ 1.33
BECN1-219ENST00000593112 CD2APQ9Y5K6 639 aa23.35■■□□□ 1.33
BECN1-219ENST00000593112 VSIG10Q8N0Z9 540 aa23.34■■□□□ 1.33
BECN1-219ENST00000593112 ZBTB1Q9Y2K1 713 aa23.34■■□□□ 1.33
BECN1-219ENST00000593112 SOS1Q07889 1333 aaPredicted RBP23.33■■□□□ 1.33
BECN1-219ENST00000593112 HEG1Q9ULI3 1381 aa23.33■■□□□ 1.33
BECN1-219ENST00000593112 USP42Q9H9J4 1324 aaKnown RBP23.33■■□□□ 1.32
BECN1-219ENST00000593112 YBX3P16989 372 aaKnown RBP eCLIP23.32■■□□□ 1.32
BECN1-219ENST00000593112 GPR162Q16538 588 aa23.32■■□□□ 1.32
BECN1-219ENST00000593112 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
BECN1-219ENST00000593112 TTC5Q8N0Z6 440 aa23.32■■□□□ 1.32
BECN1-219ENST00000593112 AFDNP55196 1824 aaKnown RBP23.31■■□□□ 1.32
BECN1-219ENST00000593112 NLGN1Q8N2Q7 840 aa23.31■■□□□ 1.32
BECN1-219ENST00000593112 KDM3BQ7LBC6 1761 aa23.3■■□□□ 1.32
BECN1-219ENST00000593112 BRCA1P38398 1863 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms