RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 SSFA2P28290 1259 aa15.52■□□□□ 0.08
PRKCSH-220ENST00000593104 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
PRKCSH-220ENST00000593104 IFNL2Q8IZJ0 200 aa15.52■□□□□ 0.08
PRKCSH-220ENST00000593104 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
PRKCSH-220ENST00000593104 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
PRKCSH-220ENST00000593104 KDRP35968 1356 aa15.5■□□□□ 0.07
PRKCSH-220ENST00000593104 PXDNLA1KZ92 1463 aa15.5■□□□□ 0.07
PRKCSH-220ENST00000593104 AEBP1Q8IUX7 1158 aa15.49■□□□□ 0.07
PRKCSH-220ENST00000593104 KDM6AO15550 1401 aaPredicted RBP15.49■□□□□ 0.07
PRKCSH-220ENST00000593104 MYH14Q7Z406 1995 aaKnown RBP15.48■□□□□ 0.07
PRKCSH-220ENST00000593104 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
PRKCSH-220ENST00000593104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.48■□□□□ 0.07
PRKCSH-220ENST00000593104 COL5A3P25940 1745 aaPredicted RBP15.48■□□□□ 0.07
PRKCSH-220ENST00000593104 KIF13BQ9NQT8 1826 aa15.47■□□□□ 0.07
PRKCSH-220ENST00000593104 PCGF6Q9BYE7 350 aa15.47■□□□□ 0.07
PRKCSH-220ENST00000593104 C4AP0C0L4 1744 aa15.46■□□□□ 0.07
PRKCSH-220ENST00000593104 KIF3CO14782 793 aa15.46■□□□□ 0.07
PRKCSH-220ENST00000593104 ZNF530Q6P9A1 599 aaPredicted RBP15.46■□□□□ 0.07
PRKCSH-220ENST00000593104 ARHGEF1Q92888 912 aaKnown RBP15.46■□□□□ 0.07
PRKCSH-220ENST00000593104 PANK3Q9H999 370 aa15.46■□□□□ 0.07
PRKCSH-220ENST00000593104 BCS1LQ9Y276 419 aa15.46■□□□□ 0.07
PRKCSH-220ENST00000593104 RTCBQ9Y3I0 505 aaKnown RBP15.46■□□□□ 0.07
PRKCSH-220ENST00000593104 TRAPPC3LQ5T215 181 aa15.45■□□□□ 0.06
PRKCSH-220ENST00000593104 PTCD1O75127 700 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-220ENST00000593104 HSPA5P11021 654 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-220ENST00000593104 GYS1P13807 737 aa15.44■□□□□ 0.06
PRKCSH-220ENST00000593104 DPEP1P16444 411 aa15.44■□□□□ 0.06
PRKCSH-220ENST00000593104 HSPA6P17066 643 aa15.44■□□□□ 0.06
PRKCSH-220ENST00000593104 SRP68Q9UHB9 627 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-220ENST00000593104 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
PRKCSH-220ENST00000593104 CABP4P57796 275 aa15.43■□□□□ 0.06
PRKCSH-220ENST00000593104 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
PRKCSH-220ENST00000593104 ERVV-2B6SEH9 535 aa15.42■□□□□ 0.06
PRKCSH-220ENST00000593104 HMGB2P26583 209 aaKnown RBP15.42■□□□□ 0.06
PRKCSH-220ENST00000593104 PLEKHO1Q53GL0 409 aaPredicted RBP15.42■□□□□ 0.06
PRKCSH-220ENST00000593104 DCAF5Q96JK2 942 aa15.42■□□□□ 0.06
PRKCSH-220ENST00000593104 TJP1Q07157 1748 aa15.42■□□□□ 0.06
PRKCSH-220ENST00000593104 RFC4P35249 363 aa15.41■□□□□ 0.06
PRKCSH-220ENST00000593104 IFFO2Q5TF58 517 aa15.41■□□□□ 0.06
PRKCSH-220ENST00000593104 ARHGAP27Q6ZUM4 889 aa15.41■□□□□ 0.06
PRKCSH-220ENST00000593104 CNTNAP4Q9C0A0 1308 aa15.41■□□□□ 0.06
PRKCSH-220ENST00000593104 RPS6KA4O75676 772 aa15.4■□□□□ 0.06
PRKCSH-220ENST00000593104 FCHSD2O94868 740 aa15.4■□□□□ 0.06
PRKCSH-220ENST00000593104 MTHFSP49914 203 aa15.4■□□□□ 0.06
PRKCSH-220ENST00000593104 SULT6B1Q6IMI4 303 aa15.4■□□□□ 0.06
PRKCSH-220ENST00000593104 NFATC2IPQ8NCF5 419 aa15.4■□□□□ 0.06
PRKCSH-220ENST00000593104 NMRK2Q9NPI5 230 aa15.4■□□□□ 0.06
PRKCSH-220ENST00000593104 ZNF831Q5JPB2 1677 aa15.4■□□□□ 0.06
PRKCSH-220ENST00000593104 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
PRKCSH-220ENST00000593104 KCNA3P22001 575 aa15.39■□□□□ 0.05
PRKCSH-220ENST00000593104 CRKLP46109 303 aaKnown RBP15.39■□□□□ 0.05
PRKCSH-220ENST00000593104 DDR1Q08345 913 aa15.39■□□□□ 0.05
PRKCSH-220ENST00000593104 FKBP8Q14318 412 aa15.39■□□□□ 0.05
PRKCSH-220ENST00000593104 MORC1Q86VD1 984 aa15.39■□□□□ 0.05
PRKCSH-220ENST00000593104 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
PRKCSH-220ENST00000593104 HSP90AB1P08238 724 aaKnown RBP15.38■□□□□ 0.05
PRKCSH-220ENST00000593104 TGFB2P61812 414 aa15.38■□□□□ 0.05
PRKCSH-220ENST00000593104 RC3H1Q5TC82 1133 aaKnown RBP15.38■□□□□ 0.05
PRKCSH-220ENST00000593104 CCDC87Q9NVE4 849 aa15.38■□□□□ 0.05
PRKCSH-220ENST00000593104 PARP3Q9Y6F1 533 aa15.38■□□□□ 0.05
PRKCSH-220ENST00000593104 SCN11AQ9UI33 1791 aa15.37■□□□□ 0.05
PRKCSH-220ENST00000593104 CHRNA5P30532 468 aa15.37■□□□□ 0.05
PRKCSH-220ENST00000593104 EIF4G2P78344 907 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRKCSH-220ENST00000593104 C1orf141Q5JVX7 400 aa15.37■□□□□ 0.05
PRKCSH-220ENST00000593104 ADAMTS7Q9UKP4 1686 aa15.37■□□□□ 0.05
PRKCSH-220ENST00000593104 ADRA2BP18089 450 aa15.36■□□□□ 0.05
PRKCSH-220ENST00000593104 HTRA3P83110 453 aa15.36■□□□□ 0.05
PRKCSH-220ENST00000593104 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
PRKCSH-220ENST00000593104 DNAJC10Q8IXB1 793 aa15.36■□□□□ 0.05
PRKCSH-220ENST00000593104 LGR6Q9HBX8 967 aa15.36■□□□□ 0.05
PRKCSH-220ENST00000593104 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-220ENST00000593104 VIRMAQ69YN4 1812 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-220ENST00000593104 IL13P35225 146 aa15.35■□□□□ 0.05
PRKCSH-220ENST00000593104 AMOTQ4VCS5 1084 aa15.35■□□□□ 0.05
PRKCSH-220ENST00000593104 C9orf131Q5VYM1 1079 aa15.35■□□□□ 0.05
PRKCSH-220ENST00000593104 INTS5Q6P9B9 1019 aaKnown RBP15.35■□□□□ 0.05
PRKCSH-220ENST00000593104 TIMELESSQ9UNS1 1208 aa15.35■□□□□ 0.05
PRKCSH-220ENST00000593104 ARFGEF1Q9Y6D6 1849 aa15.35■□□□□ 0.05
PRKCSH-220ENST00000593104 HMOX1P09601 288 aa15.34■□□□□ 0.05
PRKCSH-220ENST00000593104 KCPQ6ZWJ8 1503 aa15.33■□□□□ 0.05
PRKCSH-220ENST00000593104 USPL1Q5W0Q7 1092 aa15.33■□□□□ 0.04
PRKCSH-220ENST00000593104 PLEKHG2Q9H7P9 1386 aa15.33■□□□□ 0.04
PRKCSH-220ENST00000593104 POLRMTO00411 1230 aaKnown RBP15.32■□□□□ 0.04
PRKCSH-220ENST00000593104 AFDNP55196 1824 aaKnown RBP15.31■□□□□ 0.04
PRKCSH-220ENST00000593104 TOMM70O94826 608 aa15.31■□□□□ 0.04
PRKCSH-220ENST00000593104 RASSF7Q02833 373 aa15.31■□□□□ 0.04
PRKCSH-220ENST00000593104 CNGB1Q14028 1251 aaPredicted RBP15.31■□□□□ 0.04
PRKCSH-220ENST00000593104 PIM2Q9P1W9 311 aa15.31■□□□□ 0.04
PRKCSH-220ENST00000593104 SBF1O95248 1867 aa15.3■□□□□ 0.04
PRKCSH-220ENST00000593104 AMER1Q5JTC6 1135 aaPredicted RBP15.3■□□□□ 0.04
PRKCSH-220ENST00000593104 SLC52A2Q9HAB3 445 aa15.3■□□□□ 0.04
PRKCSH-220ENST00000593104 RNF181Q9P0P0 153 aa15.3■□□□□ 0.04
PRKCSH-220ENST00000593104 ZBTB1Q9Y2K1 713 aa15.3■□□□□ 0.04
PRKCSH-220ENST00000593104 KNSTRNQ9Y448 316 aa15.3■□□□□ 0.04
PRKCSH-220ENST00000593104 SOS1Q07889 1333 aaPredicted RBP15.29■□□□□ 0.04
PRKCSH-220ENST00000593104 RNMTO43148 476 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-220ENST00000593104 TM4SF1P30408 202 aa15.29■□□□□ 0.04
PRKCSH-220ENST00000593104 DALRD3Q5D0E6 543 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-220ENST00000593104 AKAP4Q5JQC9 854 aa15.29■□□□□ 0.04
PRKCSH-220ENST00000593104 WDR90Q96KV7 1748 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms