RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 MIS18AQ9NYP9 233 aa20.22■□□□□ 0.83
PRKCSH-219ENST00000593101 VIRMAQ69YN4 1812 aaKnown RBP20.22■□□□□ 0.83
PRKCSH-219ENST00000593101 E9PSI1 815 aa20.21■□□□□ 0.83
PRKCSH-219ENST00000593101 MYH16Q9H6N6 1097 aa20.21■□□□□ 0.83
PRKCSH-219ENST00000593101 BABAM1Q9NWV8 329 aa20.21■□□□□ 0.83
PRKCSH-219ENST00000593101 TSPYL4Q9UJ04 414 aa20.21■□□□□ 0.83
PRKCSH-219ENST00000593101 ADAMTS7Q9UKP4 1686 aa20.21■□□□□ 0.83
PRKCSH-219ENST00000593101 BCL9O00512 1426 aa20.2■□□□□ 0.82
PRKCSH-219ENST00000593101 CHL1O00533 1208 aa20.2■□□□□ 0.82
PRKCSH-219ENST00000593101 KCNQ2O43526 872 aa20.2■□□□□ 0.82
PRKCSH-219ENST00000593101 ZNF853P0CG23 659 aa20.2■□□□□ 0.82
PRKCSH-219ENST00000593101 SLFN5Q08AF3 891 aa20.2■□□□□ 0.82
PRKCSH-219ENST00000593101 PIGBQ92521 554 aa20.2■□□□□ 0.82
PRKCSH-219ENST00000593101 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-219ENST00000593101 DOT1LQ8TEK3 1739 aa20.17■□□□□ 0.82
PRKCSH-219ENST00000593101 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
PRKCSH-219ENST00000593101 SLC39A6Q13433 755 aa20.17■□□□□ 0.82
PRKCSH-219ENST00000593101 TSR2Q969E8 191 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-219ENST00000593101 MBIPQ9NS73 344 aa20.17■□□□□ 0.82
PRKCSH-219ENST00000593101 ITGB4P16144 1822 aa20.16■□□□□ 0.82
PRKCSH-219ENST00000593101 TTC5Q8N0Z6 440 aa20.16■□□□□ 0.82
PRKCSH-219ENST00000593101 BCL11BQ9C0K0 894 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-219ENST00000593101 MRC1P22897 1456 aa20.16■□□□□ 0.82
PRKCSH-219ENST00000593101 TRIM37O94972 964 aa20.15■□□□□ 0.82
PRKCSH-219ENST00000593101 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
PRKCSH-219ENST00000593101 TRMT2AQ8IZ69 625 aaKnown RBP20.15■□□□□ 0.82
PRKCSH-219ENST00000593101 ASAP1Q9ULH1 1129 aa20.15■□□□□ 0.82
PRKCSH-219ENST00000593101 KCNQ3O43525 872 aa20.14■□□□□ 0.81
PRKCSH-219ENST00000593101 PTF1AQ7RTS3 328 aa20.14■□□□□ 0.81
PRKCSH-219ENST00000593101 ATG3Q9NT62 314 aa20.14■□□□□ 0.81
PRKCSH-219ENST00000593101 SIPA1L3O60292 1781 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-219ENST00000593101 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
PRKCSH-219ENST00000593101 SMARCC1Q92922 1105 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-219ENST00000593101 DUSP27Q5VZP5 1158 aa20.12■□□□□ 0.81
PRKCSH-219ENST00000593101 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
PRKCSH-219ENST00000593101 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-219ENST00000593101 EXOSC9Q06265 439 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-219ENST00000593101 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
PRKCSH-219ENST00000593101 FMNL2Q96PY5 1086 aa20.1■□□□□ 0.81
PRKCSH-219ENST00000593101 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
PRKCSH-219ENST00000593101 NHSQ6T4R5 1651 aa20.1■□□□□ 0.81
PRKCSH-219ENST00000593101 ZNF496Q96IT1 587 aaPredicted RBP20.09■□□□□ 0.81
PRKCSH-219ENST00000593101 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.81
PRKCSH-219ENST00000593101 C8orf58Q8NAV2 365 aa20.08■□□□□ 0.81
PRKCSH-219ENST00000593101 APBA3O96018 575 aa20.07■□□□□ 0.8
PRKCSH-219ENST00000593101 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
PRKCSH-219ENST00000593101 SF3B2Q13435 895 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-219ENST00000593101 KRT24Q2M2I5 525 aa20.06■□□□□ 0.8
PRKCSH-219ENST00000593101 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
PRKCSH-219ENST00000593101 BTAF1O14981 1849 aa20.05■□□□□ 0.8
PRKCSH-219ENST00000593101 SNRPA1P09661 255 aaKnown RBP20.05■□□□□ 0.8
PRKCSH-219ENST00000593101 TWISTNBQ3B726 338 aaPredicted RBP20.05■□□□□ 0.8
PRKCSH-219ENST00000593101 GIGYF1O75420 1035 aaPredicted RBP20.04■□□□□ 0.8
PRKCSH-219ENST00000593101 TSPYL6Q8N831 410 aa20.04■□□□□ 0.8
PRKCSH-219ENST00000593101 HEG1Q9ULI3 1381 aa20.04■□□□□ 0.8
PRKCSH-219ENST00000593101 LOC102724428A0A0B4J2F2 783 aa20.03■□□□□ 0.8
PRKCSH-219ENST00000593101 ATP6V1AP38606 617 aa20.03■□□□□ 0.8
PRKCSH-219ENST00000593101 SIK1P57059 783 aa20.03■□□□□ 0.8
PRKCSH-219ENST00000593101 VSIG10Q8N0Z9 540 aa20.03■□□□□ 0.8
PRKCSH-219ENST00000593101 TEX13AQ9BXU3 409 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-219ENST00000593101 PAPPAQ13219 1627 aa20.02■□□□□ 0.8
PRKCSH-219ENST00000593101 VAMP4O75379 141 aa20.02■□□□□ 0.8
PRKCSH-219ENST00000593101 CHMP4AQ9BY43 222 aa20.02■□□□□ 0.8
PRKCSH-219ENST00000593101 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.79
PRKCSH-219ENST00000593101 PLSCR1O15162 318 aa20.01■□□□□ 0.79
PRKCSH-219ENST00000593101 HOXB7P09629 217 aa20.01■□□□□ 0.79
PRKCSH-219ENST00000593101 CT47B1P0C2W7 299 aaPredicted RBP20.01■□□□□ 0.79
PRKCSH-219ENST00000593101 EIF2S2P20042 333 aaKnown RBP20.01■□□□□ 0.79
PRKCSH-219ENST00000593101 CCDC125Q86Z20 511 aa20.01■□□□□ 0.79
PRKCSH-219ENST00000593101 KCPQ6ZWJ8 1503 aa20.01■□□□□ 0.79
PRKCSH-219ENST00000593101 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
PRKCSH-219ENST00000593101 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
PRKCSH-219ENST00000593101 SLC4A9Q96Q91 983 aa20■□□□□ 0.79
PRKCSH-219ENST00000593101 CCNL1Q9UK58 526 aaPredicted RBP20■□□□□ 0.79
PRKCSH-219ENST00000593101 UBR2Q8IWV8 1755 aa20■□□□□ 0.79
PRKCSH-219ENST00000593101 STARD3NLO95772 234 aa19.99■□□□□ 0.79
PRKCSH-219ENST00000593101 DNAJC10Q8IXB1 793 aa19.99■□□□□ 0.79
PRKCSH-219ENST00000593101 NECTIN2Q92692 538 aa19.99■□□□□ 0.79
PRKCSH-219ENST00000593101 USP16Q9Y5T5 823 aa19.99■□□□□ 0.79
PRKCSH-219ENST00000593101 HDGFL1Q5TGJ6 251 aa19.98■□□□□ 0.79
PRKCSH-219ENST00000593101 CCDC30Q5VVM6 783 aa19.98■□□□□ 0.79
PRKCSH-219ENST00000593101 ILDR2Q71H61 639 aa19.98■□□□□ 0.79
PRKCSH-219ENST00000593101 BAG6P46379 1132 aa19.97■□□□□ 0.79
PRKCSH-219ENST00000593101 KCNQ4P56696 695 aa19.97■□□□□ 0.79
PRKCSH-219ENST00000593101 SLC27A3Q5K4L6 730 aa19.97■□□□□ 0.79
PRKCSH-219ENST00000593101 ZNF428Q96B54 188 aa19.97■□□□□ 0.79
PRKCSH-219ENST00000593101 HMGB2P26583 209 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-219ENST00000593101 EN1Q05925 392 aaPredicted RBP19.96■□□□□ 0.79
PRKCSH-219ENST00000593101 ITPK1Q13572 414 aa19.96■□□□□ 0.79
PRKCSH-219ENST00000593101 TXNRD1Q16881 649 aa19.96■□□□□ 0.79
PRKCSH-219ENST00000593101 TCERG1O14776 1098 aaKnown RBP19.95■□□□□ 0.78
PRKCSH-219ENST00000593101 STK31Q9BXU1 1019 aa19.95■□□□□ 0.78
PRKCSH-219ENST00000593101 RCAN3Q9UKA8 241 aa19.95■□□□□ 0.78
PRKCSH-219ENST00000593101 TNS1Q9HBL0 1735 aaKnown RBP19.94■□□□□ 0.78
PRKCSH-219ENST00000593101 CYP19A1P11511 503 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-219ENST00000593101 PROM2Q8N271 834 aa19.94■□□□□ 0.78
PRKCSH-219ENST00000593101 EP400Q96L91 3159 aa19.93■□□□□ 0.78
PRKCSH-219ENST00000593101 A1BGP04217 495 aa19.93■□□□□ 0.78
PRKCSH-219ENST00000593101 RARSP54136 660 aaKnown RBP19.93■□□□□ 0.78
PRKCSH-219ENST00000593101 ALDH1L2Q3SY69 923 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms