RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 EYA1Q99502 592 aa15.85■□□□□ 0.13
DDX39A-219ENST00000592927 USHBP1Q8N6Y0 703 aa15.84■□□□□ 0.13
DDX39A-219ENST00000592927 NUDCQ9Y266 331 aa15.84■□□□□ 0.13
DDX39A-219ENST00000592927 WDR90Q96KV7 1748 aa15.84■□□□□ 0.13
DDX39A-219ENST00000592927 TUBGCP6Q96RT7 1819 aa15.83■□□□□ 0.12
DDX39A-219ENST00000592927 C16orf71Q8IYS4 520 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-219ENST00000592927 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-219ENST00000592927 FAM208AQ9UK61 1670 aaKnown RBP15.83■□□□□ 0.12
DDX39A-219ENST00000592927 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
DDX39A-219ENST00000592927 HSPA1AP0DMV8 641 aaKnown RBP15.82■□□□□ 0.12
DDX39A-219ENST00000592927 HSPA1BP0DMV9 641 aaKnown RBP15.82■□□□□ 0.12
DDX39A-219ENST00000592927 FSTL1Q12841 308 aa15.82■□□□□ 0.12
DDX39A-219ENST00000592927 CCDC184Q52MB2 194 aa15.82■□□□□ 0.12
DDX39A-219ENST00000592927 PCDH10Q9P2E7 1040 aa15.82■□□□□ 0.12
DDX39A-219ENST00000592927 SULT6B1Q6IMI4 303 aa15.8■□□□□ 0.12
DDX39A-219ENST00000592927 RAPGEF4Q8WZA2 1011 aa15.8■□□□□ 0.12
DDX39A-219ENST00000592927 TATP17735 454 aaPredicted RBP15.79■□□□□ 0.12
DDX39A-219ENST00000592927 FLAD1Q8NFF5 587 aa15.79■□□□□ 0.12
DDX39A-219ENST00000592927 YTHDC1Q96MU7 727 aaKnown RBP15.79■□□□□ 0.12
DDX39A-219ENST00000592927 PCNTO95613 3336 aa15.79■□□□□ 0.12
DDX39A-219ENST00000592927 HMOX1P09601 288 aa15.78■□□□□ 0.12
DDX39A-219ENST00000592927 U2AF1L5P0DN76 240 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-219ENST00000592927 U2AF1Q01081 240 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■□□□□ 10.7
DDX39A-219ENST00000592927 AEBP1Q8IUX7 1158 aa15.78■□□□□ 0.12
DDX39A-219ENST00000592927 PNISRQ8TF01 805 aaKnown RBP15.78■□□□□ 0.12
DDX39A-219ENST00000592927 NCAPD2Q15021 1401 aa15.77■□□□□ 0.12
DDX39A-219ENST00000592927 RGPD2P0DJD1 1756 aa15.77■□□□□ 0.12
DDX39A-219ENST00000592927 CENPBP07199 599 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-219ENST00000592927 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
DDX39A-219ENST00000592927 KDRP35968 1356 aa15.75■□□□□ 0.11
DDX39A-219ENST00000592927 MEGF6O75095 1541 aa15.75■□□□□ 0.11
DDX39A-219ENST00000592927 WDR43Q15061 677 aaKnown RBP eCLIP15.75■□□□□ 0.11
DDX39A-219ENST00000592927 ARHGAP27Q6ZUM4 889 aa15.75■□□□□ 0.11
DDX39A-219ENST00000592927 ZCRB1Q8TBF4 217 aaKnown RBP15.74■□□□□ 0.11
DDX39A-219ENST00000592927 BCS1LQ9Y276 419 aa15.74■□□□□ 0.11
DDX39A-219ENST00000592927 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
DDX39A-219ENST00000592927 FCHSD2O94868 740 aa15.73■□□□□ 0.11
DDX39A-219ENST00000592927 SMIM5Q71RC9 77 aa15.73■□□□□ 0.11
DDX39A-219ENST00000592927 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
DDX39A-219ENST00000592927 CICQ96RK0 1608 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-219ENST00000592927 PLEKHO1Q53GL0 409 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-219ENST00000592927 RSPH6AQ9H0K4 717 aa15.72■□□□□ 0.11
DDX39A-219ENST00000592927 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
DDX39A-219ENST00000592927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.11
DDX39A-219ENST00000592927 LY75O60449 1722 aa15.71■□□□□ 0.11
DDX39A-219ENST00000592927 PRKAR2BP31323 418 aa15.71■□□□□ 0.11
DDX39A-219ENST00000592927 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
DDX39A-219ENST00000592927 C9orf131Q5VYM1 1079 aa15.71■□□□□ 0.11
DDX39A-219ENST00000592927 AMIGO3Q86WK7 504 aa15.71■□□□□ 0.11
DDX39A-219ENST00000592927 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
DDX39A-219ENST00000592927 PLEKHG2Q9H7P9 1386 aa15.71■□□□□ 0.11
DDX39A-219ENST00000592927 PHF14O94880 888 aa15.7■□□□□ 0.1
DDX39A-219ENST00000592927 NEFMP07197 916 aa15.7■□□□□ 0.1
DDX39A-219ENST00000592927 SMC1BQ8NDV3 1235 aa15.7■□□□□ 0.1
DDX39A-219ENST00000592927 A0A0G2JLW4 131 aa15.69■□□□□ 0.1
DDX39A-219ENST00000592927 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
DDX39A-219ENST00000592927 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
DDX39A-219ENST00000592927 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
DDX39A-219ENST00000592927 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
DDX39A-219ENST00000592927 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
DDX39A-219ENST00000592927 AK7Q96M32 723 aa15.68■□□□□ 0.1
DDX39A-219ENST00000592927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
DDX39A-219ENST00000592927 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDX39A-219ENST00000592927 ZNF530Q6P9A1 599 aaPredicted RBP15.67■□□□□ 0.1
DDX39A-219ENST00000592927 MAPK8IP3Q9UPT6 1336 aa15.67■□□□□ 0.1
DDX39A-219ENST00000592927 PXDNLA1KZ92 1463 aa15.66■□□□□ 0.1
DDX39A-219ENST00000592927 CYP27B1O15528 508 aa15.66■□□□□ 0.1
DDX39A-219ENST00000592927 TGFB2P61812 414 aa15.66■□□□□ 0.1
DDX39A-219ENST00000592927 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
DDX39A-219ENST00000592927 C1orf141Q5JVX7 400 aa15.66■□□□□ 0.1
DDX39A-219ENST00000592927 IFNL2Q8IZJ0 200 aa15.66■□□□□ 0.1
DDX39A-219ENST00000592927 PHACTR3Q96KR7 559 aa15.66■□□□□ 0.1
DDX39A-219ENST00000592927 KCPQ6ZWJ8 1503 aa15.66■□□□□ 0.1
DDX39A-219ENST00000592927 PHKG2P15735 406 aa15.65■□□□□ 0.1
DDX39A-219ENST00000592927 MTHFSDQ2M296 383 aaKnown RBP15.65■□□□□ 0.1
DDX39A-219ENST00000592927 GAS2L2Q8NHY3 880 aa15.65■□□□□ 0.1
DDX39A-219ENST00000592927 PLEKHF1Q96S99 279 aa15.65■□□□□ 0.1
DDX39A-219ENST00000592927 PKD1L3Q7Z443 1732 aa15.64■□□□□ 0.09
DDX39A-219ENST00000592927 CCDC146Q8IYE0 955 aa15.64■□□□□ 0.09
DDX39A-219ENST00000592927 DOT1LQ8TEK3 1739 aa15.64■□□□□ 0.09
DDX39A-219ENST00000592927 RUNDC1Q96C34 613 aa15.64■□□□□ 0.09
DDX39A-219ENST00000592927 ZBED9Q6R2W3 1325 aa15.64■□□□□ 0.09
DDX39A-219ENST00000592927 PALLDQ8WX93 1383 aa15.63■□□□□ 0.09
DDX39A-219ENST00000592927 HSP90AB1P08238 724 aaKnown RBP15.63■□□□□ 0.09
DDX39A-219ENST00000592927 MMP10P09238 476 aa15.63■□□□□ 0.09
DDX39A-219ENST00000592927 AKAP4Q5JQC9 854 aa15.63■□□□□ 0.09
DDX39A-219ENST00000592927 C10orf71Q711Q0 1435 aa15.62■□□□□ 0.09
DDX39A-219ENST00000592927 DPEP1P16444 411 aa15.62■□□□□ 0.09
DDX39A-219ENST00000592927 SSFA2P28290 1259 aa15.62■□□□□ 0.09
DDX39A-219ENST00000592927 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
DDX39A-219ENST00000592927 RNF181Q9P0P0 153 aa15.62■□□□□ 0.09
DDX39A-219ENST00000592927 C5P01031 1676 aa15.61■□□□□ 0.09
DDX39A-219ENST00000592927 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
DDX39A-219ENST00000592927 FOXN1O15353 648 aa15.6■□□□□ 0.09
DDX39A-219ENST00000592927 NFE2L2Q16236 605 aa15.6■□□□□ 0.09
DDX39A-219ENST00000592927 MPRIPQ6WCQ1 1025 aa15.6■□□□□ 0.09
DDX39A-219ENST00000592927 DCAF5Q96JK2 942 aa15.6■□□□□ 0.09
DDX39A-219ENST00000592927 NGEFQ8N5V2 710 aa15.59■□□□□ 0.09
DDX39A-219ENST00000592927 PRDM10Q9NQV6 1147 aa15.59■□□□□ 0.09
DDX39A-219ENST00000592927 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms