RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	SENP3-EIF4A1	A0A087X0R7	540 aa		21.22	■□□□□ 0.99
RFX2-223	ENST00000592883	GNPAT	O15228	680 aa		21.21	■□□□□ 0.99
RFX2-223	ENST00000592883	ZNF831	Q5JPB2	1677 aa		21.21	■□□□□ 0.99
RFX2-223	ENST00000592883	GIGYF1	O75420	1035 aa	Predicted RBP	21.2	■□□□□ 0.98
RFX2-223	ENST00000592883	PLEKHG2	Q9H7P9	1386 aa		21.2	■□□□□ 0.98
RFX2-223	ENST00000592883	WWC3	Q9ULE0	1092 aa		21.19	■□□□□ 0.98
RFX2-223	ENST00000592883	KDR	P35968	1356 aa		21.19	■□□□□ 0.98
RFX2-223	ENST00000592883	SLC4A9	Q96Q91	983 aa		21.17	■□□□□ 0.98
RFX2-223	ENST00000592883	KIF13B	Q9NQT8	1826 aa		21.17	■□□□□ 0.98
RFX2-223	ENST00000592883	MYH14	Q7Z406	1995 aa	Known RBP	21.17	■□□□□ 0.98
RFX2-223	ENST00000592883	N4BP2	Q86UW6	1770 aa	Predicted RBP	21.16	■□□□□ 0.98
RFX2-223	ENST00000592883	KIAA1551	Q9HCM1	1747 aa		21.16	■□□□□ 0.98
RFX2-223	ENST00000592883	KDM6A	O15550	1401 aa	Predicted RBP	21.16	■□□□□ 0.98
RFX2-223	ENST00000592883	ATP10D	Q9P241	1426 aa		21.16	■□□□□ 0.98
RFX2-223	ENST00000592883	ERVV-2	B6SEH9	535 aa		21.16	■□□□□ 0.98
RFX2-223	ENST00000592883	PLEKHO1	Q53GL0	409 aa	Predicted RBP	21.16	■□□□□ 0.98
RFX2-223	ENST00000592883	ZNF530	Q6P9A1	599 aa	Predicted RBP	21.15	■□□□□ 0.98
RFX2-223	ENST00000592883	AEBP1	Q8IUX7	1158 aa		21.15	■□□□□ 0.98
RFX2-223	ENST00000592883	DCAF5	Q96JK2	942 aa		21.15	■□□□□ 0.98
RFX2-223	ENST00000592883	RBM42	Q9BTD8	480 aa	Known RBP	21.15	■□□□□ 0.98
RFX2-223	ENST00000592883	VIRMA	Q69YN4	1812 aa	Known RBP	21.15	■□□□□ 0.98
RFX2-223	ENST00000592883	C4A	P0C0L4	1744 aa		21.15	■□□□□ 0.98
RFX2-223	ENST00000592883	HSP90AB1	P08238	724 aa	Known RBP	21.14	■□□□□ 0.97
RFX2-223	ENST00000592883	MORC1	Q86VD1	984 aa		21.14	■□□□□ 0.97
RFX2-223	ENST00000592883	SCN11A	Q9UI33	1791 aa		21.14	■□□□□ 0.97
RFX2-223	ENST00000592883	CIC	Q96RK0	1608 aa	Predicted RBP	21.12	■□□□□ 0.97
RFX2-223	ENST00000592883	MMP10	P09238	476 aa		21.12	■□□□□ 0.97
RFX2-223	ENST00000592883	RTCB	Q9Y3I0	505 aa	Known RBP	21.12	■□□□□ 0.97
RFX2-223	ENST00000592883	CABP4	P57796	275 aa		21.11	■□□□□ 0.97
RFX2-223	ENST00000592883	AMOT	Q4VCS5	1084 aa		21.11	■□□□□ 0.97
RFX2-223	ENST00000592883	TRAPPC3L	Q5T215	181 aa		21.11	■□□□□ 0.97
RFX2-223	ENST00000592883	CCER1	Q8TC90	406 aa	Predicted RBP	21.11	■□□□□ 0.97
RFX2-223	ENST00000592883	ADCY9	O60503	1353 aa		21.1	■□□□□ 0.97
RFX2-223	ENST00000592883	TJP1	Q07157	1748 aa		21.1	■□□□□ 0.97
RFX2-223	ENST00000592883	MTHFS	P49914	203 aa		21.09	■□□□□ 0.97
RFX2-223	ENST00000592883	SULT6B1	Q6IMI4	303 aa		21.09	■□□□□ 0.97
RFX2-223	ENST00000592883	ARHGEF1	Q92888	912 aa	Known RBP	21.09	■□□□□ 0.97
RFX2-223	ENST00000592883	KNSTRN	Q9Y448	316 aa		21.09	■□□□□ 0.97
RFX2-223	ENST00000592883	CNTNAP4	Q9C0A0	1308 aa		21.08	■□□□□ 0.97
RFX2-223	ENST00000592883	PXDNL	A1KZ92	1463 aa		21.08	■□□□□ 0.97
RFX2-223	ENST00000592883	BRCA1	P38398	1863 aa	Known RBP	21.08	■□□□□ 0.97
RFX2-223	ENST00000592883	C1orf141	Q5JVX7	400 aa		21.08	■□□□□ 0.97
RFX2-223	ENST00000592883	RC3H1	Q5TC82	1133 aa	Known RBP	21.08	■□□□□ 0.97
RFX2-223	ENST00000592883	IL13	P35225	146 aa		21.07	■□□□□ 0.96
RFX2-223	ENST00000592883	ZNF526	Q8TF50	670 aa	Predicted RBP	21.07	■□□□□ 0.96
RFX2-223	ENST00000592883	GPBP1L1	Q9HC44	474 aa	Predicted RBP	21.07	■□□□□ 0.96
RFX2-223	ENST00000592883	PTCD1	O75127	700 aa	Known RBP	21.06	■□□□□ 0.96
RFX2-223	ENST00000592883	RPS6KA4	O75676	772 aa		21.06	■□□□□ 0.96
RFX2-223	ENST00000592883	ADRA2B	P18089	450 aa		21.06	■□□□□ 0.96
RFX2-223	ENST00000592883	NLGN1	Q8N2Q7	840 aa		21.06	■□□□□ 0.96
RFX2-223	ENST00000592883	NFATC2IP	Q8NCF5	419 aa		21.06	■□□□□ 0.96
RFX2-223	ENST00000592883	GYS1	P13807	737 aa		21.05	■□□□□ 0.96
RFX2-223	ENST00000592883	RFC4	P35249	363 aa		21.05	■□□□□ 0.96
RFX2-223	ENST00000592883	C10orf71	Q711Q0	1435 aa		21.04	■□□□□ 0.96
RFX2-223	ENST00000592883	AMER1	Q5JTC6	1135 aa	Predicted RBP	21.03	■□□□□ 0.96
RFX2-223	ENST00000592883		A0A0G2JLW4	131 aa		21.02	■□□□□ 0.96
RFX2-223	ENST00000592883	CRKL	P46109	303 aa	Known RBP	21.02	■□□□□ 0.96
RFX2-223	ENST00000592883	TGFB2	P61812	414 aa		21.02	■□□□□ 0.96
RFX2-223	ENST00000592883	ADAMTS7	Q9UKP4	1686 aa		21.02	■□□□□ 0.95
RFX2-223	ENST00000592883	KIF7	Q2M1P5	1343 aa		21.02	■□□□□ 0.95
RFX2-223	ENST00000592883	ARFGEF1	Q9Y6D6	1849 aa		21.01	■□□□□ 0.95
RFX2-223	ENST00000592883	CCDC87	Q9NVE4	849 aa		21	■□□□□ 0.95
RFX2-223	ENST00000592883	BCS1L	Q9Y276	419 aa		21	■□□□□ 0.95
RFX2-223	ENST00000592883	PARP3	Q9Y6F1	533 aa		21	■□□□□ 0.95
RFX2-223	ENST00000592883	DPEP1	P16444	411 aa		20.99	■□□□□ 0.95
RFX2-223	ENST00000592883	AKAP4	Q5JQC9	854 aa		20.99	■□□□□ 0.95
RFX2-223	ENST00000592883	SRP68	Q9UHB9	627 aa	Known RBP	20.99	■□□□□ 0.95
RFX2-223	ENST00000592883	HMOX1	P09601	288 aa		20.98	■□□□□ 0.95
RFX2-223	ENST00000592883	LGR6	Q9HBX8	967 aa		20.98	■□□□□ 0.95
RFX2-223	ENST00000592883	SLC52A2	Q9HAB3	445 aa		20.97	■□□□□ 0.95
RFX2-223	ENST00000592883	USP42	Q9H9J4	1324 aa	Known RBP	20.97	■□□□□ 0.95
RFX2-223	ENST00000592883	MRC1	P22897	1456 aa		20.96	■□□□□ 0.95
RFX2-223	ENST00000592883	FKBP8	Q14318	412 aa		20.96	■□□□□ 0.95
RFX2-223	ENST00000592883	INTS5	Q6P9B9	1019 aa	Known RBP	20.96	■□□□□ 0.95
RFX2-223	ENST00000592883	CEP350	Q5VT06	3117 aa		20.95	■□□□□ 0.95
RFX2-223	ENST00000592883	AFDN	P55196	1824 aa	Known RBP	20.95	■□□□□ 0.94
RFX2-223	ENST00000592883	DNAJC10	Q8IXB1	793 aa		20.95	■□□□□ 0.94
RFX2-223	ENST00000592883	KIF3C	O14782	793 aa		20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	PER1	O15534	1290 aa	Predicted RBP	20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	RNMT	O43148	476 aa	Known RBP	20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	FCHSD2	O94868	740 aa		20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	KCNA3	P22001	575 aa		20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	DDR1	Q08345	913 aa		20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	SLC39A6	Q13433	755 aa		20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	CC2D1B	Q5T0F9	858 aa	Known RBP	20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	ARHGAP27	Q6ZUM4	889 aa		20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	KCP	Q6ZWJ8	1503 aa		20.94	■□□□□ 0.94
RFX2-223	ENST00000592883	UBR2	Q8IWV8	1755 aa		20.93	■□□□□ 0.94
RFX2-223	ENST00000592883	MTHFSD	Q2M296	383 aa	Known RBP	20.92	■□□□□ 0.94
RFX2-223	ENST00000592883	DIAPH1	O60610	1272 aa	Known RBP	20.91	■□□□□ 0.94
RFX2-223	ENST00000592883	HSPA6	P17066	643 aa		20.91	■□□□□ 0.94
RFX2-223	ENST00000592883	SBF1	O95248	1867 aa		20.9	■□□□□ 0.94
RFX2-223	ENST00000592883	SOS1	Q07889	1333 aa	Predicted RBP	20.9	■□□□□ 0.94
RFX2-223	ENST00000592883	CYP19A1	P11511	503 aa	Predicted RBP	20.9	■□□□□ 0.94
RFX2-223	ENST00000592883	USPL1	Q5W0Q7	1092 aa		20.9	■□□□□ 0.94
RFX2-223	ENST00000592883	POLRMT	O00411	1230 aa	Known RBP	20.89	■□□□□ 0.93
RFX2-223	ENST00000592883	TM4SF1	P30408	202 aa		20.89	■□□□□ 0.93
RFX2-223	ENST00000592883	COL3A1	P02461	1466 aa	Predicted RBP	20.88	■□□□□ 0.93
RFX2-223	ENST00000592883	SIPA1L3	O60292	1781 aa	Predicted RBP	20.88	■□□□□ 0.93
RFX2-223	ENST00000592883	NRXN2	Q9P2S2	1712 aa		20.88	■□□□□ 0.93

Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms