RNA–Protein interactions for RNA: ENST00000592555.1

SAFB-213, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 1,360 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-213ENST00000592555 DOT1LQ8TEK3 1739 aa23.99■■□□□ 1.43
SAFB-213ENST00000592555 NHSQ6T4R5 1651 aa23.98■■□□□ 1.43
SAFB-213ENST00000592555 E9PSI1 815 aa23.98■■□□□ 1.43
SAFB-213ENST00000592555 CHL1O00533 1208 aa23.98■■□□□ 1.43
SAFB-213ENST00000592555 ZNF853P0CG23 659 aa23.98■■□□□ 1.43
SAFB-213ENST00000592555 PIGBQ92521 554 aa23.98■■□□□ 1.43
SAFB-213ENST00000592555 SMARCC1Q92922 1105 aaPredicted RBP23.98■■□□□ 1.43
SAFB-213ENST00000592555 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
SAFB-213ENST00000592555 TOGARAM1Q9Y4F4 1720 aa23.97■■□□□ 1.43
SAFB-213ENST00000592555 HMGB2P26583 209 aaKnown RBP23.97■■□□□ 1.43
SAFB-213ENST00000592555 CCDC125Q86Z20 511 aa23.97■■□□□ 1.43
SAFB-213ENST00000592555 VIRMAQ69YN4 1812 aaKnown RBP23.96■■□□□ 1.43
SAFB-213ENST00000592555 TTC5Q8N0Z6 440 aa23.95■■□□□ 1.42
SAFB-213ENST00000592555 TSPYL4Q9UJ04 414 aa23.95■■□□□ 1.42
SAFB-213ENST00000592555 KCNQ2O43526 872 aa23.94■■□□□ 1.42
SAFB-213ENST00000592555 ZNF790Q6PG37 636 aa23.94■■□□□ 1.42
SAFB-213ENST00000592555 SIPA1L3O60292 1781 aaPredicted RBP23.94■■□□□ 1.42
SAFB-213ENST00000592555 ITGB4P16144 1822 aa23.94■■□□□ 1.42
SAFB-213ENST00000592555 SBF2Q86WG5 1849 aa23.94■■□□□ 1.42
SAFB-213ENST00000592555 SENP3-EIF4A1A0A087X0R7 540 aa23.93■■□□□ 1.42
SAFB-213ENST00000592555 TRIM37O94972 964 aa23.92■■□□□ 1.42
SAFB-213ENST00000592555 LAS1LQ9Y4W2 734 aaKnown RBP23.92■■□□□ 1.42
SAFB-213ENST00000592555 SLFN5Q08AF3 891 aa23.91■■□□□ 1.42
SAFB-213ENST00000592555 CHMP4AQ9BY43 222 aa23.91■■□□□ 1.42
SAFB-213ENST00000592555 ATG3Q9NT62 314 aa23.91■■□□□ 1.42
SAFB-213ENST00000592555 PLSCR1O15162 318 aa23.9■■□□□ 1.42
SAFB-213ENST00000592555 SF3B2Q13435 895 aaKnown RBP23.9■■□□□ 1.42
SAFB-213ENST00000592555 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
SAFB-213ENST00000592555 SOS1Q07889 1333 aaPredicted RBP23.9■■□□□ 1.42
SAFB-213ENST00000592555 TRMT2AQ8IZ69 625 aaKnown RBP23.89■■□□□ 1.41
SAFB-213ENST00000592555 VSIG10Q8N0Z9 540 aa23.89■■□□□ 1.41
SAFB-213ENST00000592555 FMNL2Q96PY5 1086 aa23.89■■□□□ 1.41
SAFB-213ENST00000592555 MBIPQ9NS73 344 aa23.89■■□□□ 1.41
SAFB-213ENST00000592555 ASAP1Q9ULH1 1129 aa23.88■■□□□ 1.41
SAFB-213ENST00000592555 PAPPAQ13219 1627 aa23.87■■□□□ 1.41
SAFB-213ENST00000592555 KAT6BQ8WYB5 2073 aa23.87■■□□□ 1.41
SAFB-213ENST00000592555 PALLDQ8WX93 1383 aa23.86■■□□□ 1.41
SAFB-213ENST00000592555 FANCIQ9NVI1 1328 aa23.86■■□□□ 1.41
SAFB-213ENST00000592555 TEX13AQ9BXU3 409 aaPredicted RBP23.86■■□□□ 1.41
SAFB-213ENST00000592555 MIS18AQ9NYP9 233 aa23.86■■□□□ 1.41
SAFB-213ENST00000592555 KDM3BQ7LBC6 1761 aa23.86■■□□□ 1.41
SAFB-213ENST00000592555 BTAF1O14981 1849 aa23.85■■□□□ 1.41
SAFB-213ENST00000592555 APBA3O96018 575 aa23.85■■□□□ 1.41
SAFB-213ENST00000592555 HOXB7P09629 217 aa23.85■■□□□ 1.41
SAFB-213ENST00000592555 EIF4A1P60842 406 aaKnown RBP23.85■■□□□ 1.41
SAFB-213ENST00000592555 SLC39A6Q13433 755 aa23.85■■□□□ 1.41
SAFB-213ENST00000592555 SLC27A3Q5K4L6 730 aa23.84■■□□□ 1.41
SAFB-213ENST00000592555 SPINK5Q9NQ38 1064 aaPredicted RBP23.84■■□□□ 1.41
SAFB-213ENST00000592555 HEG1Q9ULI3 1381 aa23.83■■□□□ 1.41
SAFB-213ENST00000592555 CT47B1P0C2W7 299 aaPredicted RBP23.83■■□□□ 1.41
SAFB-213ENST00000592555 SNRPA1P09661 255 aaKnown RBP23.82■■□□□ 1.4
SAFB-213ENST00000592555 BAG6P46379 1132 aa23.82■■□□□ 1.4
SAFB-213ENST00000592555 DUSP27Q5VZP5 1158 aa23.82■■□□□ 1.4
SAFB-213ENST00000592555 PTF1AQ7RTS3 328 aa23.82■■□□□ 1.4
SAFB-213ENST00000592555 CDCA7LQ96GN5 454 aa23.82■■□□□ 1.4
SAFB-213ENST00000592555 ZNF496Q96IT1 587 aaPredicted RBP23.82■■□□□ 1.4
SAFB-213ENST00000592555 LOC102724428A0A0B4J2F2 783 aa23.81■■□□□ 1.4
SAFB-213ENST00000592555 SIK1P57059 783 aa23.81■■□□□ 1.4
SAFB-213ENST00000592555 TSR2Q969E8 191 aaKnown RBP23.81■■□□□ 1.4
SAFB-213ENST00000592555 UBR2Q8IWV8 1755 aa23.81■■□□□ 1.4
SAFB-213ENST00000592555 KCPQ6ZWJ8 1503 aa23.81■■□□□ 1.4
SAFB-213ENST00000592555 ZNF831Q5JPB2 1677 aa23.81■■□□□ 1.4
SAFB-213ENST00000592555 PTCD1O75127 700 aaKnown RBP23.8■■□□□ 1.4
SAFB-213ENST00000592555 ZNF428Q96B54 188 aa23.8■■□□□ 1.4
SAFB-213ENST00000592555 RBM42Q9BTD8 480 aaKnown RBP23.8■■□□□ 1.4
SAFB-213ENST00000592555 RGPD3A6NKT7 1758 aaPredicted RBP23.8■■□□□ 1.4
SAFB-213ENST00000592555 RGPD4Q7Z3J3 1758 aa23.8■■□□□ 1.4
SAFB-213ENST00000592555 TNS1Q9HBL0 1735 aaKnown RBP23.8■■□□□ 1.4
SAFB-213ENST00000592555 KCNQ3O43525 872 aa23.79■■□□□ 1.4
SAFB-213ENST00000592555 GIGYF1O75420 1035 aaPredicted RBP23.79■■□□□ 1.4
SAFB-213ENST00000592555 SOCS7O14512 581 aa23.78■■□□□ 1.4
SAFB-213ENST00000592555 ATP6V1AP38606 617 aa23.78■■□□□ 1.4
SAFB-213ENST00000592555 ILDR2Q71H61 639 aa23.78■■□□□ 1.4
SAFB-213ENST00000592555 CICQ96RK0 1608 aaPredicted RBP23.77■■□□□ 1.4
SAFB-213ENST00000592555 STARD3NLO95772 234 aa23.77■■□□□ 1.4
SAFB-213ENST00000592555 CCNL1Q9UK58 526 aaPredicted RBP23.77■■□□□ 1.4
SAFB-213ENST00000592555 LY75O60449 1722 aa23.76■■□□□ 1.39
SAFB-213ENST00000592555 EXOSC9Q06265 439 aaKnown RBP23.76■■□□□ 1.39
SAFB-213ENST00000592555 TWISTNBQ3B726 338 aaPredicted RBP23.76■■□□□ 1.39
SAFB-213ENST00000592555 UPF1Q92900 1129 aaKnown RBP eCLIP23.76■■□□□ 1.39
SAFB-213ENST00000592555 TXNRD1Q16881 649 aa23.74■■□□□ 1.39
SAFB-213ENST00000592555 C8orf58Q8NAV2 365 aa23.74■■□□□ 1.39
SAFB-213ENST00000592555 ERBB4Q15303 1308 aa23.73■■□□□ 1.39
SAFB-213ENST00000592555 CAMKK2Q96RR4 588 aa23.73■■□□□ 1.39
SAFB-213ENST00000592555 SLC4A9Q96Q91 983 aa23.72■■□□□ 1.39
SAFB-213ENST00000592555 EP400Q96L91 3159 aa23.71■■□□□ 1.39
SAFB-213ENST00000592555 VAMP4O75379 141 aa23.71■■□□□ 1.39
SAFB-213ENST00000592555 RC3H1Q5TC82 1133 aaKnown RBP23.71■■□□□ 1.39
SAFB-213ENST00000592555 CCDC30Q5VVM6 783 aa23.71■■□□□ 1.39
SAFB-213ENST00000592555 CYP19A1P11511 503 aaPredicted RBP23.69■■□□□ 1.38
SAFB-213ENST00000592555 EN1Q05925 392 aaPredicted RBP23.69■■□□□ 1.38
SAFB-213ENST00000592555 HDGFL1Q5TGJ6 251 aa23.69■■□□□ 1.38
SAFB-213ENST00000592555 DNAJC10Q8IXB1 793 aa23.69■■□□□ 1.38
SAFB-213ENST00000592555 ELL2O00472 640 aaPredicted RBP23.68■■□□□ 1.38
SAFB-213ENST00000592555 ITPK1Q13572 414 aa23.68■■□□□ 1.38
SAFB-213ENST00000592555 KRT24Q2M2I5 525 aa23.68■■□□□ 1.38
SAFB-213ENST00000592555 PROM2Q8N271 834 aa23.68■■□□□ 1.38
SAFB-213ENST00000592555 TSPYL6Q8N831 410 aa23.68■■□□□ 1.38
SAFB-213ENST00000592555 USP16Q9Y5T5 823 aa23.68■■□□□ 1.38
SAFB-213ENST00000592555 CNTNAP4Q9C0A0 1308 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms