RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
CNN1-209ENST00000592338 SIK1P57059 783 aa21.71■■□□□ 1.07
CNN1-209ENST00000592338 MTHFSDQ2M296 383 aaKnown RBP21.71■■□□□ 1.07
CNN1-209ENST00000592338 CFAP53Q96M91 514 aa21.71■■□□□ 1.07
CNN1-209ENST00000592338 CABP4P57796 275 aa21.7■■□□□ 1.06
CNN1-209ENST00000592338 AKAP4Q5JQC9 854 aa21.7■■□□□ 1.06
CNN1-209ENST00000592338 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
CNN1-209ENST00000592338 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
CNN1-209ENST00000592338 SGIP1Q9BQI5 828 aa21.69■■□□□ 1.06
CNN1-209ENST00000592338 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
CNN1-209ENST00000592338 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
CNN1-209ENST00000592338 ITPK1Q13572 414 aa21.68■■□□□ 1.06
CNN1-209ENST00000592338 AMIGO3Q86WK7 504 aa21.68■■□□□ 1.06
CNN1-209ENST00000592338 COL23A1Q86Y22 540 aaPredicted RBP21.67■■□□□ 1.06
CNN1-209ENST00000592338 NFATC2IPQ8NCF5 419 aa21.67■■□□□ 1.06
CNN1-209ENST00000592338 LGR6Q9HBX8 967 aa21.67■■□□□ 1.06
CNN1-209ENST00000592338 C4AP0C0L4 1744 aa21.66■■□□□ 1.06
CNN1-209ENST00000592338 ATP6V1AP38606 617 aa21.66■■□□□ 1.06
CNN1-209ENST00000592338 SMIM5Q71RC9 77 aa21.66■■□□□ 1.06
CNN1-209ENST00000592338 SLC4A9Q96Q91 983 aa21.66■■□□□ 1.06
CNN1-209ENST00000592338 RNMTO43148 476 aaKnown RBP21.65■■□□□ 1.06
CNN1-209ENST00000592338 MSH5O43196 834 aa21.65■■□□□ 1.06
CNN1-209ENST00000592338 AK7Q96M32 723 aa21.65■■□□□ 1.06
CNN1-209ENST00000592338 RBM42Q9BTD8 480 aaKnown RBP21.65■■□□□ 1.06
CNN1-209ENST00000592338 RSPH6AQ9H0K4 717 aa21.65■■□□□ 1.06
CNN1-209ENST00000592338 PRKAR2BP31323 418 aa21.64■■□□□ 1.05
CNN1-209ENST00000592338 SLC16A10Q8TF71 515 aa21.64■■□□□ 1.05
CNN1-209ENST00000592338 MAP3K5Q99683 1374 aa21.62■■□□□ 1.05
CNN1-209ENST00000592338 KCPQ6ZWJ8 1503 aa21.62■■□□□ 1.05
CNN1-209ENST00000592338 PHF14O94880 888 aa21.62■■□□□ 1.05
CNN1-209ENST00000592338 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
CNN1-209ENST00000592338 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.05
CNN1-209ENST00000592338 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
CNN1-209ENST00000592338 SLC52A2Q9HAB3 445 aa21.62■■□□□ 1.05
CNN1-209ENST00000592338 NUDCQ9Y266 331 aa21.62■■□□□ 1.05
CNN1-209ENST00000592338 MSL1Q68DK7 614 aa21.61■■□□□ 1.05
CNN1-209ENST00000592338 PTCD1O75127 700 aaKnown RBP21.6■■□□□ 1.05
CNN1-209ENST00000592338 GAS2L2Q8NHY3 880 aa21.6■■□□□ 1.05
CNN1-209ENST00000592338 ARXQ96QS3 562 aa21.6■■□□□ 1.05
CNN1-209ENST00000592338 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
CNN1-209ENST00000592338 GNPATO15228 680 aa21.59■■□□□ 1.05
CNN1-209ENST00000592338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.58■■□□□ 1.05
CNN1-209ENST00000592338 HMGB2P26583 209 aaKnown RBP21.58■■□□□ 1.05
CNN1-209ENST00000592338 SLC39A6Q13433 755 aa21.58■■□□□ 1.05
CNN1-209ENST00000592338 GNAT3A8MTJ3 354 aa21.57■■□□□ 1.04
CNN1-209ENST00000592338 FLAD1Q8NFF5 587 aa21.57■■□□□ 1.04
CNN1-209ENST00000592338 POLD1P28340 1107 aa21.56■■□□□ 1.04
CNN1-209ENST00000592338 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
CNN1-209ENST00000592338 SSFA2P28290 1259 aa21.55■■□□□ 1.04
CNN1-209ENST00000592338 KLHL34Q8N239 644 aa21.55■■□□□ 1.04
CNN1-209ENST00000592338 IL17REQ8NFR9 667 aa21.55■■□□□ 1.04
CNN1-209ENST00000592338 SYT17Q9BSW7 474 aa21.55■■□□□ 1.04
CNN1-209ENST00000592338 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
CNN1-209ENST00000592338 FCHSD2O94868 740 aa21.54■■□□□ 1.04
CNN1-209ENST00000592338 RALBP1Q15311 655 aa21.54■■□□□ 1.04
CNN1-209ENST00000592338 CEMIPQ8WUJ3 1361 aa21.52■■□□□ 1.04
CNN1-209ENST00000592338 CHD4Q14839 1912 aa21.51■■□□□ 1.03
CNN1-209ENST00000592338 CRKLP46109 303 aaKnown RBP21.51■■□□□ 1.03
CNN1-209ENST00000592338 DNAJC10Q8IXB1 793 aa21.51■■□□□ 1.03
CNN1-209ENST00000592338 TEFQ10587 303 aa21.5■■□□□ 1.03
CNN1-209ENST00000592338 RC3H1Q5TC82 1133 aaKnown RBP21.5■■□□□ 1.03
CNN1-209ENST00000592338 RTCBQ9Y3I0 505 aaKnown RBP21.5■■□□□ 1.03
CNN1-209ENST00000592338 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
CNN1-209ENST00000592338 KDM3BQ7LBC6 1761 aa21.49■■□□□ 1.03
CNN1-209ENST00000592338 KIF13BQ9NQT8 1826 aa21.48■■□□□ 1.03
CNN1-209ENST00000592338 RPS6KA4O75676 772 aa21.48■■□□□ 1.03
CNN1-209ENST00000592338 MCM10Q7L590 875 aa21.48■■□□□ 1.03
CNN1-209ENST00000592338 DCTN1Q14203 1278 aa21.47■■□□□ 1.03
CNN1-209ENST00000592338 TRAPPC3LQ5T215 181 aa21.47■■□□□ 1.03
CNN1-209ENST00000592338 NLGN2Q8NFZ4 835 aa21.47■■□□□ 1.03
CNN1-209ENST00000592338 INTS5Q6P9B9 1019 aaKnown RBP21.46■■□□□ 1.03
CNN1-209ENST00000592338 TTC5Q8N0Z6 440 aa21.46■■□□□ 1.03
CNN1-209ENST00000592338 ARHGEF1Q92888 912 aaKnown RBP21.46■■□□□ 1.03
CNN1-209ENST00000592338 PLEKHF1Q96S99 279 aa21.46■■□□□ 1.03
CNN1-209ENST00000592338 KIAA1551Q9HCM1 1747 aa21.46■■□□□ 1.03
CNN1-209ENST00000592338 LAMB4A4D0S4 1761 aa21.45■■□□□ 1.02
CNN1-209ENST00000592338 N4BP2Q86UW6 1770 aaPredicted RBP21.45■■□□□ 1.02
CNN1-209ENST00000592338 AFDNP55196 1824 aaKnown RBP21.44■■□□□ 1.02
CNN1-209ENST00000592338 KCNQ3O43525 872 aa21.44■■□□□ 1.02
CNN1-209ENST00000592338 CYP19A1P11511 503 aaPredicted RBP21.44■■□□□ 1.02
CNN1-209ENST00000592338 ADRA2BP18089 450 aa21.44■■□□□ 1.02
CNN1-209ENST00000592338 ZNF790Q6PG37 636 aa21.44■■□□□ 1.02
CNN1-209ENST00000592338 RTF1Q92541 710 aaKnown RBP21.44■■□□□ 1.02
CNN1-209ENST00000592338 ZNF496Q96IT1 587 aaPredicted RBP21.44■■□□□ 1.02
CNN1-209ENST00000592338 CCDC87Q9NVE4 849 aa21.44■■□□□ 1.02
CNN1-209ENST00000592338 HEG1Q9ULI3 1381 aa21.43■■□□□ 1.02
CNN1-209ENST00000592338 BTBD11A6QL63 1104 aa21.42■■□□□ 1.02
CNN1-209ENST00000592338 RFC4P35249 363 aa21.42■■□□□ 1.02
CNN1-209ENST00000592338 VSIG10Q8N0Z9 540 aa21.42■■□□□ 1.02
CNN1-209ENST00000592338 PRKRIP1Q9H875 184 aaPredicted RBP21.42■■□□□ 1.02
CNN1-209ENST00000592338 SRP68Q9UHB9 627 aaKnown RBP21.42■■□□□ 1.02
CNN1-209ENST00000592338 ZBTB1Q9Y2K1 713 aa21.42■■□□□ 1.02
CNN1-209ENST00000592338 SCN7AQ01118 1682 aa21.41■■□□□ 1.02
CNN1-209ENST00000592338 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
CNN1-209ENST00000592338 DCAF8L1A6NGE4 600 aa21.41■■□□□ 1.02
CNN1-209ENST00000592338 NEFMP07197 916 aa21.41■■□□□ 1.02
CNN1-209ENST00000592338 GYS1P13807 737 aa21.41■■□□□ 1.02
CNN1-209ENST00000592338 MAPK8IP3Q9UPT6 1336 aa21.4■■□□□ 1.02
CNN1-209ENST00000592338 MMP10P09238 476 aa21.4■■□□□ 1.02
CNN1-209ENST00000592338 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms