RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 DCAF5Q96JK2 942 aa25.02■■□□□ 1.6
CIRBP-237ENST00000592234 KIF7Q2M1P5 1343 aa25.02■■□□□ 1.6
CIRBP-237ENST00000592234 GOLGB1Q14789 3259 aaKnown RBP25.02■■□□□ 1.6
CIRBP-237ENST00000592234 SSFA2P28290 1259 aa25.01■■□□□ 1.59
CIRBP-237ENST00000592234 ITPK1Q13572 414 aa25.01■■□□□ 1.59
CIRBP-237ENST00000592234 SMIM5Q71RC9 77 aa25.01■■□□□ 1.59
CIRBP-237ENST00000592234 AEBP1Q8IUX7 1158 aa25.01■■□□□ 1.59
CIRBP-237ENST00000592234 AMER1Q5JTC6 1135 aaPredicted RBP24.99■■□□□ 1.59
CIRBP-237ENST00000592234 GNPATO15228 680 aa24.98■■□□□ 1.59
CIRBP-237ENST00000592234 SULT6B1Q6IMI4 303 aa24.98■■□□□ 1.59
CIRBP-237ENST00000592234 CD2APQ9Y5K6 639 aa24.98■■□□□ 1.59
CIRBP-237ENST00000592234 ZNF831Q5JPB2 1677 aa24.97■■□□□ 1.59
CIRBP-237ENST00000592234 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
CIRBP-237ENST00000592234 C1orf141Q5JVX7 400 aa24.97■■□□□ 1.59
CIRBP-237ENST00000592234 RBM42Q9BTD8 480 aaKnown RBP24.97■■□□□ 1.59
CIRBP-237ENST00000592234 KDRP35968 1356 aa24.96■■□□□ 1.59
CIRBP-237ENST00000592234 IL13P35225 146 aa24.96■■□□□ 1.59
CIRBP-237ENST00000592234 CABP4P57796 275 aa24.96■■□□□ 1.59
CIRBP-237ENST00000592234 MTHFSP49914 203 aa24.95■■□□□ 1.58
CIRBP-237ENST00000592234 COL5A3P25940 1745 aaPredicted RBP24.95■■□□□ 1.58
CIRBP-237ENST00000592234 GRIN3BO60391 1043 aa24.94■■□□□ 1.58
CIRBP-237ENST00000592234 YBX3P16989 372 aaKnown RBP eCLIP24.94■■□□□ 1.58
CIRBP-237ENST00000592234 SCN11AQ9UI33 1791 aa24.93■■□□□ 1.58
CIRBP-237ENST00000592234 VIRMAQ69YN4 1812 aaKnown RBP24.92■■□□□ 1.58
CIRBP-237ENST00000592234 SLC4A9Q96Q91 983 aa24.92■■□□□ 1.58
CIRBP-237ENST00000592234 RTCBQ9Y3I0 505 aaKnown RBP24.91■■□□□ 1.58
CIRBP-237ENST00000592234 CC2D1BQ5T0F9 858 aaKnown RBP24.9■■□□□ 1.58
CIRBP-237ENST00000592234 MYH14Q7Z406 1995 aaKnown RBP24.89■■□□□ 1.58
CIRBP-237ENST00000592234 PER1O15534 1290 aaPredicted RBP24.89■■□□□ 1.58
CIRBP-237ENST00000592234 TRAPPC3LQ5T215 181 aa24.89■■□□□ 1.58
CIRBP-237ENST00000592234 RC3H1Q5TC82 1133 aaKnown RBP24.88■■□□□ 1.57
CIRBP-237ENST00000592234 NFATC2IPQ8NCF5 419 aa24.88■■□□□ 1.57
CIRBP-237ENST00000592234 CNTNAP4Q9C0A0 1308 aa24.87■■□□□ 1.57
CIRBP-237ENST00000592234 PTCD1O75127 700 aaKnown RBP24.86■■□□□ 1.57
CIRBP-237ENST00000592234 AKAP4Q5JQC9 854 aa24.86■■□□□ 1.57
CIRBP-237ENST00000592234 HMOX1P09601 288 aa24.85■■□□□ 1.57
CIRBP-237ENST00000592234 C4AP0C0L4 1744 aa24.84■■□□□ 1.57
CIRBP-237ENST00000592234 MMP10P09238 476 aa24.84■■□□□ 1.57
CIRBP-237ENST00000592234 ADRA2BP18089 450 aa24.84■■□□□ 1.57
CIRBP-237ENST00000592234 ARHGEF1Q92888 912 aaKnown RBP24.84■■□□□ 1.57
CIRBP-237ENST00000592234 DIAPH1O60610 1272 aaKnown RBP24.83■■□□□ 1.57
CIRBP-237ENST00000592234 RPS6KA4O75676 772 aa24.83■■□□□ 1.57
CIRBP-237ENST00000592234 TJP1Q07157 1748 aa24.83■■□□□ 1.57
CIRBP-237ENST00000592234 KIF13BQ9NQT8 1826 aa24.82■■□□□ 1.56
CIRBP-237ENST00000592234 RFC4P35249 363 aa24.82■■□□□ 1.56
CIRBP-237ENST00000592234 CNGB1Q14028 1251 aaPredicted RBP24.82■■□□□ 1.56
CIRBP-237ENST00000592234 NLGN1Q8N2Q7 840 aa24.82■■□□□ 1.56
CIRBP-237ENST00000592234 WWC3Q9ULE0 1092 aa24.81■■□□□ 1.56
CIRBP-237ENST00000592234 CICQ96RK0 1608 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-237ENST00000592234 LGR6Q9HBX8 967 aa24.8■■□□□ 1.56
CIRBP-237ENST00000592234 CRKLP46109 303 aaKnown RBP24.79■■□□□ 1.56
CIRBP-237ENST00000592234 SLC52A2Q9HAB3 445 aa24.79■■□□□ 1.56
CIRBP-237ENST00000592234 N4BP2Q86UW6 1770 aaPredicted RBP24.79■■□□□ 1.56
CIRBP-237ENST00000592234 NPC1L1Q9UHC9 1359 aa24.79■■□□□ 1.56
CIRBP-237ENST00000592234 RNMTO43148 476 aaKnown RBP24.78■■□□□ 1.56
CIRBP-237ENST00000592234 GYS1P13807 737 aa24.78■■□□□ 1.56
CIRBP-237ENST00000592234 GIGYF1O75420 1035 aaPredicted RBP24.77■■□□□ 1.56
CIRBP-237ENST00000592234 C1QTNF8P60827 252 aa24.77■■□□□ 1.56
CIRBP-237ENST00000592234 MTHFSDQ2M296 383 aaKnown RBP24.77■■□□□ 1.56
CIRBP-237ENST00000592234 MRC1P22897 1456 aa24.77■■□□□ 1.56
CIRBP-237ENST00000592234 KIAA1551Q9HCM1 1747 aa24.76■■□□□ 1.55
CIRBP-237ENST00000592234 ADAMTS7Q9UKP4 1686 aa24.75■■□□□ 1.55
CIRBP-237ENST00000592234 CCDC87Q9NVE4 849 aa24.74■■□□□ 1.55
CIRBP-237ENST00000592234 PARP3Q9Y6F1 533 aa24.74■■□□□ 1.55
CIRBP-237ENST00000592234 COL3A1P02461 1466 aaPredicted RBP24.74■■□□□ 1.55
CIRBP-237ENST00000592234 PXDNLA1KZ92 1463 aa24.73■■□□□ 1.55
CIRBP-237ENST00000592234 C10orf71Q711Q0 1435 aa24.73■■□□□ 1.55
CIRBP-237ENST00000592234 ATP10DQ9P241 1426 aa24.73■■□□□ 1.55
CIRBP-237ENST00000592234 U2SURPO15042 1029 aaKnown RBP24.73■■□□□ 1.55
CIRBP-237ENST00000592234 SLC39A6Q13433 755 aa24.73■■□□□ 1.55
CIRBP-237ENST00000592234 TGFB2P61812 414 aa24.72■■□□□ 1.55
CIRBP-237ENST00000592234 DNAJC10Q8IXB1 793 aa24.72■■□□□ 1.55
CIRBP-237ENST00000592234 INTS5Q6P9B9 1019 aaKnown RBP24.71■■□□□ 1.55
CIRBP-237ENST00000592234 SRP68Q9UHB9 627 aaKnown RBP24.71■■□□□ 1.55
CIRBP-237ENST00000592234 USP42Q9H9J4 1324 aaKnown RBP24.7■■□□□ 1.54
CIRBP-237ENST00000592234 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
CIRBP-237ENST00000592234 BRCA1P38398 1863 aaKnown RBP24.69■■□□□ 1.54
CIRBP-237ENST00000592234 KCPQ6ZWJ8 1503 aa24.69■■□□□ 1.54
CIRBP-237ENST00000592234 UBR2Q8IWV8 1755 aa24.69■■□□□ 1.54
CIRBP-237ENST00000592234 A0A0G2JLW4 131 aa24.68■■□□□ 1.54
CIRBP-237ENST00000592234 ADCY9O60503 1353 aa24.67■■□□□ 1.54
CIRBP-237ENST00000592234 FKBP8Q14318 412 aa24.67■■□□□ 1.54
CIRBP-237ENST00000592234 BCS1LQ9Y276 419 aa24.67■■□□□ 1.54
CIRBP-237ENST00000592234 ZPR1O75312 459 aa24.66■■□□□ 1.54
CIRBP-237ENST00000592234 CYP19A1P11511 503 aaPredicted RBP24.66■■□□□ 1.54
CIRBP-237ENST00000592234 GAS2L2Q8NHY3 880 aa24.66■■□□□ 1.54
CIRBP-237ENST00000592234 GPBP1L1Q9HC44 474 aaPredicted RBP24.66■■□□□ 1.54
CIRBP-237ENST00000592234 DPEP1P16444 411 aa24.65■■□□□ 1.54
CIRBP-237ENST00000592234 CFAP53Q96M91 514 aa24.65■■□□□ 1.54
CIRBP-237ENST00000592234 SOS1Q07889 1333 aaPredicted RBP24.64■■□□□ 1.54
CIRBP-237ENST00000592234 GNAT3A8MTJ3 354 aa24.64■■□□□ 1.54
CIRBP-237ENST00000592234 TTC5Q8N0Z6 440 aa24.64■■□□□ 1.54
CIRBP-237ENST00000592234 VSIG10Q8N0Z9 540 aa24.64■■□□□ 1.54
CIRBP-237ENST00000592234 SIPA1L3O60292 1781 aaPredicted RBP24.64■■□□□ 1.53
CIRBP-237ENST00000592234 DDR1Q08345 913 aa24.63■■□□□ 1.53
CIRBP-237ENST00000592234 TEFQ10587 303 aa24.63■■□□□ 1.53
CIRBP-237ENST00000592234 USPL1Q5W0Q7 1092 aa24.63■■□□□ 1.53
CIRBP-237ENST00000592234 ZNF526Q8TF50 670 aaPredicted RBP24.63■■□□□ 1.53
CIRBP-237ENST00000592234 ARFGEF1Q9Y6D6 1849 aa24.63■■□□□ 1.53
CIRBP-237ENST00000592234 ZBTB1Q9Y2K1 713 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms