RNA–Protein interactions for RNA: ENST00000592113.5

PTBP1-217, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-217ENST00000592113 TAF7Q15545 349 aaPredicted RBP29.3■■■□□ 2.28
PTBP1-217ENST00000592113 CDCA7LQ96GN5 454 aa29.29■■■□□ 2.28
PTBP1-217ENST00000592113 BABAM1Q9NWV8 329 aa29.29■■■□□ 2.28
PTBP1-217ENST00000592113 CENPBP07199 599 aaPredicted RBP29.28■■■□□ 2.28
PTBP1-217ENST00000592113 KRT27Q7Z3Y8 459 aa29.28■■■□□ 2.28
PTBP1-217ENST00000592113 TMOD3Q9NYL9 352 aa29.27■■■□□ 2.28
PTBP1-217ENST00000592113 TSPYL4Q9UJ04 414 aa29.27■■■□□ 2.28
PTBP1-217ENST00000592113 NHSQ6T4R5 1651 aa29.27■■■□□ 2.28
PTBP1-217ENST00000592113 BCL9O00512 1426 aa29.26■■■□□ 2.28
PTBP1-217ENST00000592113 BTBD11A6QL63 1104 aa29.25■■■□□ 2.27
PTBP1-217ENST00000592113 FANCIQ9NVI1 1328 aa29.25■■■□□ 2.27
PTBP1-217ENST00000592113 SBF2Q86WG5 1849 aa29.25■■■□□ 2.27
PTBP1-217ENST00000592113 PAPPAQ13219 1627 aa29.25■■■□□ 2.27
PTBP1-217ENST00000592113 ZNF853P0CG23 659 aa29.25■■■□□ 2.27
PTBP1-217ENST00000592113 NFATC2IPQ8NCF5 419 aa29.25■■■□□ 2.27
PTBP1-217ENST00000592113 SYTL4Q96C24 671 aaPredicted RBP29.25■■■□□ 2.27
PTBP1-217ENST00000592113 SPINK5Q9NQ38 1064 aaPredicted RBP29.25■■■□□ 2.27
PTBP1-217ENST00000592113 CHL1O00533 1208 aa29.23■■■□□ 2.27
PTBP1-217ENST00000592113 TSR2Q969E8 191 aaKnown RBP29.23■■■□□ 2.27
PTBP1-217ENST00000592113 MBIPQ9NS73 344 aa29.23■■■□□ 2.27
PTBP1-217ENST00000592113 DUSP27Q5VZP5 1158 aa29.21■■■□□ 2.27
PTBP1-217ENST00000592113 TRMT2AQ8IZ69 625 aaKnown RBP29.2■■■□□ 2.27
PTBP1-217ENST00000592113 TTC5Q8N0Z6 440 aa29.2■■■□□ 2.27
PTBP1-217ENST00000592113 FAM196AQ6ZSG2 479 aa29.2■■■□□ 2.26
PTBP1-217ENST00000592113 ACSBG1Q96GR2 724 aa29.2■■■□□ 2.26
PTBP1-217ENST00000592113 MIS18AQ9NYP9 233 aa29.19■■■□□ 2.26
PTBP1-217ENST00000592113 UBR2Q8IWV8 1755 aa29.19■■■□□ 2.26
PTBP1-217ENST00000592113 PRIM1P49642 420 aaKnown RBP29.18■■■□□ 2.26
PTBP1-217ENST00000592113 BTAF1O14981 1849 aa29.16■■■□□ 2.26
PTBP1-217ENST00000592113 FAM182BQ5T319 152 aa29.16■■■□□ 2.26
PTBP1-217ENST00000592113 ZNF790Q6PG37 636 aa29.15■■■□□ 2.26
PTBP1-217ENST00000592113 PIGBQ92521 554 aa29.15■■■□□ 2.26
PTBP1-217ENST00000592113 EXOSC9Q06265 439 aaKnown RBP29.12■■■□□ 2.25
PTBP1-217ENST00000592113 SLC39A6Q13433 755 aa29.11■■■□□ 2.25
PTBP1-217ENST00000592113 CT47B1P0C2W7 299 aaPredicted RBP29.1■■■□□ 2.25
PTBP1-217ENST00000592113 LAMB4A4D0S4 1761 aa29.1■■■□□ 2.25
PTBP1-217ENST00000592113 FMNL2Q96PY5 1086 aa29.09■■■□□ 2.25
PTBP1-217ENST00000592113 KCPQ6ZWJ8 1503 aa29.09■■■□□ 2.25
PTBP1-217ENST00000592113 SOS1Q07889 1333 aaPredicted RBP29.08■■■□□ 2.25
PTBP1-217ENST00000592113 KCNQ2O43526 872 aa29.08■■■□□ 2.25
PTBP1-217ENST00000592113 EIF4A1P60842 406 aaKnown RBP29.08■■■□□ 2.25
PTBP1-217ENST00000592113 TWISTNBQ3B726 338 aaPredicted RBP29.07■■■□□ 2.24
PTBP1-217ENST00000592113 SMARCC1Q92922 1105 aaPredicted RBP29.07■■■□□ 2.24
PTBP1-217ENST00000592113 C5P01031 1676 aa29.06■■■□□ 2.24
PTBP1-217ENST00000592113 BCL11BQ9C0K0 894 aaPredicted RBP29.06■■■□□ 2.24
PTBP1-217ENST00000592113 KCNQ3O43525 872 aa29.05■■■□□ 2.24
PTBP1-217ENST00000592113 CHMP4AQ9BY43 222 aa29.05■■■□□ 2.24
PTBP1-217ENST00000592113 ATG3Q9NT62 314 aa29.05■■■□□ 2.24
PTBP1-217ENST00000592113 ASAP1Q9ULH1 1129 aa29.04■■■□□ 2.24
PTBP1-217ENST00000592113 PALLDQ8WX93 1383 aa29.04■■■□□ 2.24
PTBP1-217ENST00000592113 HOXB7P09629 217 aa29.04■■■□□ 2.24
PTBP1-217ENST00000592113 C8orf58Q8NAV2 365 aa29.04■■■□□ 2.24
PTBP1-217ENST00000592113 ZNF428Q96B54 188 aa29.04■■■□□ 2.24
PTBP1-217ENST00000592113 ZNF496Q96IT1 587 aaPredicted RBP29.03■■■□□ 2.24
PTBP1-217ENST00000592113 HEG1Q9ULI3 1381 aa29.03■■■□□ 2.24
PTBP1-217ENST00000592113 EP400Q96L91 3159 aa29.03■■■□□ 2.24
PTBP1-217ENST00000592113 ZNF831Q5JPB2 1677 aa29.02■■■□□ 2.24
PTBP1-217ENST00000592113 ELL2O00472 640 aaPredicted RBP29.02■■■□□ 2.24
PTBP1-217ENST00000592113 LY75O60449 1722 aa29.02■■■□□ 2.24
PTBP1-217ENST00000592113 CICQ96RK0 1608 aaPredicted RBP29.01■■■□□ 2.24
PTBP1-217ENST00000592113 TNS1Q9HBL0 1735 aaKnown RBP29.01■■■□□ 2.24
PTBP1-217ENST00000592113 PTCD1O75127 700 aaKnown RBP29.01■■■□□ 2.23
PTBP1-217ENST00000592113 TRIM37O94972 964 aa29.01■■■□□ 2.23
PTBP1-217ENST00000592113 KRT24Q2M2I5 525 aa29.01■■■□□ 2.23
PTBP1-217ENST00000592113 SNRPA1P09661 255 aaKnown RBP29■■■□□ 2.23
PTBP1-217ENST00000592113 RBM42Q9BTD8 480 aaKnown RBP29■■■□□ 2.23
PTBP1-217ENST00000592113 TSPYL6Q8N831 410 aa28.99■■■□□ 2.23
PTBP1-217ENST00000592113 VSIG10Q8N0Z9 540 aa28.99■■■□□ 2.23
PTBP1-217ENST00000592113 RCAN3Q9UKA8 241 aa28.99■■■□□ 2.23
PTBP1-217ENST00000592113 CACNA1FO60840 1977 aa28.98■■■□□ 2.23
PTBP1-217ENST00000592113 GIGYF1O75420 1035 aaPredicted RBP28.98■■■□□ 2.23
PTBP1-217ENST00000592113 TJP1Q07157 1748 aa28.98■■■□□ 2.23
PTBP1-217ENST00000592113 VAMP4O75379 141 aa28.97■■■□□ 2.23
PTBP1-217ENST00000592113 RGPD3A6NKT7 1758 aaPredicted RBP28.96■■■□□ 2.23
PTBP1-217ENST00000592113 RGPD4Q7Z3J3 1758 aa28.96■■■□□ 2.23
PTBP1-217ENST00000592113 HDGFL1Q5TGJ6 251 aa28.95■■■□□ 2.23
PTBP1-217ENST00000592113 TEX13AQ9BXU3 409 aaPredicted RBP28.95■■■□□ 2.23
PTBP1-217ENST00000592113 CCDC30Q5VVM6 783 aa28.94■■■□□ 2.22
PTBP1-217ENST00000592113 PTF1AQ7RTS3 328 aa28.94■■■□□ 2.22
PTBP1-217ENST00000592113 ALDH1L2Q3SY69 923 aa28.94■■■□□ 2.22
PTBP1-217ENST00000592113 LOC102724428A0A0B4J2F2 783 aa28.93■■■□□ 2.22
PTBP1-217ENST00000592113 SIK1P57059 783 aa28.93■■■□□ 2.22
PTBP1-217ENST00000592113 STK31Q9BXU1 1019 aa28.93■■■□□ 2.22
PTBP1-217ENST00000592113 COL5A3P25940 1745 aaPredicted RBP28.92■■■□□ 2.22
PTBP1-217ENST00000592113 EIF2S2P20042 333 aaKnown RBP28.92■■■□□ 2.22
PTBP1-217ENST00000592113 SMC4Q9NTJ3 1288 aa28.92■■■□□ 2.22
PTBP1-217ENST00000592113 RARSP54136 660 aaKnown RBP28.91■■■□□ 2.22
PTBP1-217ENST00000592113 ATP6V1AP38606 617 aa28.9■■■□□ 2.22
PTBP1-217ENST00000592113 STARD3NLO95772 234 aa28.89■■■□□ 2.22
PTBP1-217ENST00000592113 PRAMEF22A3QJZ6 481 aa28.89■■■□□ 2.21
PTBP1-217ENST00000592113 SF3B2Q13435 895 aaKnown RBP28.89■■■□□ 2.21
PTBP1-217ENST00000592113 TAF1LQ8IZX4 1826 aa28.88■■■□□ 2.21
PTBP1-217ENST00000592113 APBA3O96018 575 aa28.88■■■□□ 2.21
PTBP1-217ENST00000592113 NECTIN2Q92692 538 aa28.88■■■□□ 2.21
PTBP1-217ENST00000592113 HMGB2P26583 209 aaKnown RBP28.87■■■□□ 2.21
PTBP1-217ENST00000592113 SSH1Q8WYL5 1049 aa28.87■■■□□ 2.21
PTBP1-217ENST00000592113 CCNL1Q9UK58 526 aaPredicted RBP28.87■■■□□ 2.21
PTBP1-217ENST00000592113 ERBB4Q15303 1308 aa28.87■■■□□ 2.21
PTBP1-217ENST00000592113 KIF16BQ96L93 1317 aa28.87■■■□□ 2.21
PTBP1-217ENST00000592113 DNAJC10Q8IXB1 793 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms