RNA–Protein interactions for RNA: ENST00000591989.5

NEDD4L-233, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 233 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-233ENST00000591989 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
NEDD4L-233ENST00000591989 HMOX1P09601 288 aa16.73■□□□□ 0.27
NEDD4L-233ENST00000591989 MSL1Q68DK7 614 aa16.73■□□□□ 0.27
NEDD4L-233ENST00000591989 COL23A1Q86Y22 540 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-233ENST00000591989 GPBP1L1Q9HC44 474 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-233ENST00000591989 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
NEDD4L-233ENST00000591989 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
NEDD4L-233ENST00000591989 C1orf141Q5JVX7 400 aa16.72■□□□□ 0.27
NEDD4L-233ENST00000591989 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.27
NEDD4L-233ENST00000591989 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
NEDD4L-233ENST00000591989 CABP4P57796 275 aa16.7■□□□□ 0.26
NEDD4L-233ENST00000591989 ZNF526Q8TF50 670 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-233ENST00000591989 DCAF5Q96JK2 942 aa16.7■□□□□ 0.26
NEDD4L-233ENST00000591989 CICQ96RK0 1608 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-233ENST00000591989 PLEKHG2Q9H7P9 1386 aa16.69■□□□□ 0.26
NEDD4L-233ENST00000591989 ERVV-2B6SEH9 535 aa16.69■□□□□ 0.26
NEDD4L-233ENST00000591989 HMGB2P26583 209 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-233ENST00000591989 KDRP35968 1356 aa16.68■□□□□ 0.26
NEDD4L-233ENST00000591989 LOC102724428A0A0B4J2F2 783 aa16.68■□□□□ 0.26
NEDD4L-233ENST00000591989 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
NEDD4L-233ENST00000591989 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
NEDD4L-233ENST00000591989 SIK1P57059 783 aa16.68■□□□□ 0.26
NEDD4L-233ENST00000591989 ATG3Q9NT62 314 aa16.68■□□□□ 0.26
NEDD4L-233ENST00000591989 UBR3Q6ZT12 1888 aa16.67■□□□□ 0.26
NEDD4L-233ENST00000591989 AK7Q96M32 723 aa16.67■□□□□ 0.26
NEDD4L-233ENST00000591989 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
NEDD4L-233ENST00000591989 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
NEDD4L-233ENST00000591989 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
NEDD4L-233ENST00000591989 KIF3CO14782 793 aa16.66■□□□□ 0.26
NEDD4L-233ENST00000591989 KDM6AO15550 1401 aaPredicted RBP16.66■□□□□ 0.26
NEDD4L-233ENST00000591989 PHF14O94880 888 aa16.65■□□□□ 0.26
NEDD4L-233ENST00000591989 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
NEDD4L-233ENST00000591989 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
NEDD4L-233ENST00000591989 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
NEDD4L-233ENST00000591989 LINC00116Q8NCU8 138 aa16.65■□□□□ 0.26
NEDD4L-233ENST00000591989 KIAA1551Q9HCM1 1747 aa16.65■□□□□ 0.26
NEDD4L-233ENST00000591989 ITPK1Q13572 414 aa16.64■□□□□ 0.25
NEDD4L-233ENST00000591989 FLAD1Q8NFF5 587 aa16.64■□□□□ 0.25
NEDD4L-233ENST00000591989 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
NEDD4L-233ENST00000591989 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
NEDD4L-233ENST00000591989 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
NEDD4L-233ENST00000591989 AMIGO3Q86WK7 504 aa16.63■□□□□ 0.25
NEDD4L-233ENST00000591989 SCN11AQ9UI33 1791 aa16.63■□□□□ 0.25
NEDD4L-233ENST00000591989 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
NEDD4L-233ENST00000591989 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
NEDD4L-233ENST00000591989 WWC3Q9ULE0 1092 aa16.62■□□□□ 0.25
NEDD4L-233ENST00000591989 WDR90Q96KV7 1748 aa16.62■□□□□ 0.25
NEDD4L-233ENST00000591989 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
NEDD4L-233ENST00000591989 GNPATO15228 680 aa16.61■□□□□ 0.25
NEDD4L-233ENST00000591989 PTCD1O75127 700 aaKnown RBP16.61■□□□□ 0.25
NEDD4L-233ENST00000591989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.6■□□□□ 0.25
NEDD4L-233ENST00000591989 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
NEDD4L-233ENST00000591989 SLC4A9Q96Q91 983 aa16.6■□□□□ 0.25
NEDD4L-233ENST00000591989 KIF13BQ9NQT8 1826 aa16.6■□□□□ 0.25
NEDD4L-233ENST00000591989 PCNTO95613 3336 aa16.6■□□□□ 0.25
NEDD4L-233ENST00000591989 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
NEDD4L-233ENST00000591989 DNAJC5GQ8N7S2 189 aa16.58■□□□□ 0.24
NEDD4L-233ENST00000591989 SLC52A2Q9HAB3 445 aa16.58■□□□□ 0.24
NEDD4L-233ENST00000591989 N4BP2Q86UW6 1770 aaPredicted RBP16.57■□□□□ 0.24
NEDD4L-233ENST00000591989 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
NEDD4L-233ENST00000591989 SSFA2P28290 1259 aa16.57■□□□□ 0.24
NEDD4L-233ENST00000591989 APLP1P51693 650 aa16.57■□□□□ 0.24
NEDD4L-233ENST00000591989 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.241e-7■□□□□ 9.8
NEDD4L-233ENST00000591989 PRKAR2BP31323 418 aa16.56■□□□□ 0.24
NEDD4L-233ENST00000591989 RTCBQ9Y3I0 505 aaKnown RBP16.56■□□□□ 0.24
NEDD4L-233ENST00000591989 PXDNLA1KZ92 1463 aa16.55■□□□□ 0.24
NEDD4L-233ENST00000591989 BRCA1P38398 1863 aaKnown RBP16.55■□□□□ 0.24
NEDD4L-233ENST00000591989 SLC39A6Q13433 755 aa16.55■□□□□ 0.24
NEDD4L-233ENST00000591989 TRAPPC3LQ5T215 181 aa16.55■□□□□ 0.24
NEDD4L-233ENST00000591989 GAS2L2Q8NHY3 880 aa16.55■□□□□ 0.24
NEDD4L-233ENST00000591989 COL5A3P25940 1745 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-233ENST00000591989 ZNF831Q5JPB2 1677 aa16.54■□□□□ 0.24
NEDD4L-233ENST00000591989 GNAT3A8MTJ3 354 aa16.54■□□□□ 0.24
NEDD4L-233ENST00000591989 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
NEDD4L-233ENST00000591989 MYH14Q7Z406 1995 aaKnown RBP16.53■□□□□ 0.24
NEDD4L-233ENST00000591989 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
NEDD4L-233ENST00000591989 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
NEDD4L-233ENST00000591989 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
NEDD4L-233ENST00000591989 RPS6KA4O75676 772 aa16.52■□□□□ 0.24
NEDD4L-233ENST00000591989 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.24
NEDD4L-233ENST00000591989 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
NEDD4L-233ENST00000591989 RFC4P35249 363 aa16.51■□□□□ 0.23
NEDD4L-233ENST00000591989 CRKLP46109 303 aaKnown RBP16.51■□□□□ 0.23
NEDD4L-233ENST00000591989 TEFQ10587 303 aa16.51■□□□□ 0.23
NEDD4L-233ENST00000591989 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
NEDD4L-233ENST00000591989 IL17REQ8NFR9 667 aa16.51■□□□□ 0.23
NEDD4L-233ENST00000591989 TJP1Q07157 1748 aa16.5■□□□□ 0.23
NEDD4L-233ENST00000591989 TOMM70O94826 608 aa16.5■□□□□ 0.23
NEDD4L-233ENST00000591989 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
NEDD4L-233ENST00000591989 ADAMTS7Q9UKP4 1686 aa16.5■□□□□ 0.23
NEDD4L-233ENST00000591989 MRC1P22897 1456 aa16.49■□□□□ 0.23
NEDD4L-233ENST00000591989 FCHSD2O94868 740 aa16.49■□□□□ 0.23
NEDD4L-233ENST00000591989 COL13A1Q5TAT6 717 aaPredicted RBP16.49■□□□□ 0.23
NEDD4L-233ENST00000591989 NMRK2Q9NPI5 230 aa16.49■□□□□ 0.23
NEDD4L-233ENST00000591989 C10orf71Q711Q0 1435 aa16.48■□□□□ 0.23
NEDD4L-233ENST00000591989 ADRA2BP18089 450 aa16.48■□□□□ 0.23
NEDD4L-233ENST00000591989 HTRA3P83110 453 aa16.48■□□□□ 0.23
NEDD4L-233ENST00000591989 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
NEDD4L-233ENST00000591989 NEFMP07197 916 aa16.47■□□□□ 0.23
NEDD4L-233ENST00000591989 MMP10P09238 476 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms