RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 PLA2G4EQ3MJ16 856 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 ILDR2Q71H61 639 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 PARP9Q8IXQ6 854 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 RNF217Q8TC41 542 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 TSC1Q92574 1164 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 AGBL1Q96MI9 1066 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 INSM2Q96T92 566 aaPredicted RBP7.88□□□□□ -1.15
NPC1-213ENST00000591955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.87□□□□□ -1.15
NPC1-213ENST00000591955 ZBED9Q6R2W3 1325 aa7.87□□□□□ -1.15
NPC1-213ENST00000591955 LILRB3O75022 631 aa7.87□□□□□ -1.15
NPC1-213ENST00000591955 ITGB2P05107 769 aa7.87□□□□□ -1.15
NPC1-213ENST00000591955 GAS6Q14393 721 aa7.87□□□□□ -1.15
NPC1-213ENST00000591955 SPOCK3Q9BQ16 436 aa7.87□□□□□ -1.15
NPC1-213ENST00000591955 KIAA0586Q9BVV6 1533 aa7.87□□□□□ -1.15
NPC1-213ENST00000591955 PLB1Q6P1J6 1458 aa7.87□□□□□ -1.15
NPC1-213ENST00000591955 HAP1P54257 671 aaPredicted RBP7.86□□□□□ -1.15
NPC1-213ENST00000591955 DHX9Q08211 1270 aaKnown RBP7.86□□□□□ -1.15
NPC1-213ENST00000591955 FAM43AQ8N2R8 423 aa7.86□□□□□ -1.15
NPC1-213ENST00000591955 DCAF5Q96JK2 942 aa7.86□□□□□ -1.15
NPC1-213ENST00000591955 KCTD15Q96SI1 283 aaPredicted RBP7.86□□□□□ -1.15
NPC1-213ENST00000591955 LIMD1Q9UGP4 676 aa7.86□□□□□ -1.15
NPC1-213ENST00000591955 PTPRGP23470 1445 aa7.86□□□□□ -1.15
NPC1-213ENST00000591955 SETD5Q9C0A6 1442 aa7.86□□□□□ -1.15
NPC1-213ENST00000591955 ITGAEP38570 1179 aa7.85□□□□□ -1.15
NPC1-213ENST00000591955 RELBQ01201 579 aa7.85□□□□□ -1.15
NPC1-213ENST00000591955 POLMQ9NP87 494 aaPredicted RBP7.85□□□□□ -1.15
NPC1-213ENST00000591955 ADAMTSL3P82987 1691 aa7.84□□□□□ -1.15
NPC1-213ENST00000591955 TEX14Q8IWB6 1497 aa7.84□□□□□ -1.15
NPC1-213ENST00000591955 NUTM2BA6NNL0 878 aaPredicted RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 NUTM2EB1AL46 878 aaPredicted RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 DDX10Q13206 875 aaKnown RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 NUTM2DQ5VT03 806 aaPredicted RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 NUTM2AQ8IVF1 878 aaPredicted RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 HELBQ8NG08 1087 aaPredicted RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 ENAMQ9NRM1 1142 aa7.84□□□□□ -1.15
NPC1-213ENST00000591955 CUEDC1Q9NWM3 386 aaPredicted RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 CDV3Q9UKY7 258 aaKnown RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 MADDQ8WXG6 1647 aa7.84□□□□□ -1.15
NPC1-213ENST00000591955 PCF11O94913 1555 aaKnown RBP7.84□□□□□ -1.15
NPC1-213ENST00000591955 PHF20L1A8MW92 1017 aa7.83□□□□□ -1.16
NPC1-213ENST00000591955 TCERG1O14776 1098 aaKnown RBP7.83□□□□□ -1.16
NPC1-213ENST00000591955 PROCP04070 461 aa7.83□□□□□ -1.16
NPC1-213ENST00000591955 HNRNPUQ00839 825 aaKnown RBP eCLIP7.83□□□□□ -1.16
NPC1-213ENST00000591955 INTS6LQ5JSJ4 861 aaKnown RBP7.83□□□□□ -1.16
NPC1-213ENST00000591955 MYSM1Q5VVJ2 828 aa7.83□□□□□ -1.16
NPC1-213ENST00000591955 PDXDC2PQ6P474 469 aa7.83□□□□□ -1.16
NPC1-213ENST00000591955 RAB3GAP2Q9H2M9 1393 aa7.83□□□□□ -1.16
NPC1-213ENST00000591955 CNTNAP5Q8WYK1 1306 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 UHRF1BP1LA0JNW5 1464 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 PTPRMP28827 1452 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 NEFMP07197 916 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 IQGAP2Q13576 1575 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 FOXD4L5Q5VV16 416 aaPredicted RBP7.82□□□□□ -1.16
NPC1-213ENST00000591955 SPATA31D1Q6ZQQ2 1576 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 TRIM52Q96A61 297 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 SLC10A4Q96EP9 437 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
NPC1-213ENST00000591955 ZNF395Q9H8N7 513 aaPredicted RBP7.82□□□□□ -1.16
NPC1-213ENST00000591955 RIMS1Q86UR5 1692 aaKnown RBP7.82□□□□□ -1.16
NPC1-213ENST00000591955 SMG6Q86US8 1419 aaKnown RBP7.81□□□□□ -1.16
NPC1-213ENST00000591955 ARHGAP9Q9BRR9 750 aa7.81□□□□□ -1.16
NPC1-213ENST00000591955 CFAP43Q8NDM7 1665 aa7.81□□□□□ -1.16
NPC1-213ENST00000591955 DISP1Q96F81 1524 aa7.81□□□□□ -1.16
NPC1-213ENST00000591955 KDM5BQ9UGL1 1544 aa7.81□□□□□ -1.16
NPC1-213ENST00000591955 DISP3Q9P2K9 1392 aa7.81□□□□□ -1.16
NPC1-213ENST00000591955 UACAQ9BZF9 1416 aa7.8□□□□□ -1.16
NPC1-213ENST00000591955 BEND7Q8N7W2 519 aaPredicted RBP7.8□□□□□ -1.16
NPC1-213ENST00000591955 MBIPQ9NS73 344 aa7.8□□□□□ -1.16
NPC1-213ENST00000591955 WDR7Q9Y4E6 1490 aa7.8□□□□□ -1.16
NPC1-213ENST00000591955 RNF123Q5XPI4 1314 aa7.79□□□□□ -1.16
NPC1-213ENST00000591955 KIAA0556O60303 1618 aa7.79□□□□□ -1.16
NPC1-213ENST00000591955 BCORL1Q5H9F3 1711 aa7.79□□□□□ -1.16
NPC1-213ENST00000591955 SOCS7O14512 581 aa7.79□□□□□ -1.16
NPC1-213ENST00000591955 TRIM66O15016 1216 aa7.79□□□□□ -1.16
NPC1-213ENST00000591955 RRP9O43818 475 aaKnown RBP7.79□□□□□ -1.16
NPC1-213ENST00000591955 TONSLQ96HA7 1378 aa7.79□□□□□ -1.16
NPC1-213ENST00000591955 NCOA2Q15596 1464 aa7.79□□□□□ -1.16
NPC1-213ENST00000591955 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
NPC1-213ENST00000591955 KDF1Q8NAX2 398 aaPredicted RBP7.78□□□□□ -1.16
NPC1-213ENST00000591955 ZC3H15Q8WU90 426 aaKnown RBP7.78□□□□□ -1.16
NPC1-213ENST00000591955 FKBPLQ9UIM3 349 aa7.78□□□□□ -1.16
NPC1-213ENST00000591955 PRXQ9BXM0 1461 aa7.78□□□□□ -1.16
NPC1-213ENST00000591955 FRMPD1Q5SYB0 1578 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 IGF1RP08069 1367 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 ADH1AP07327 375 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 BCRP11274 1271 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 PODNQ7Z5L7 613 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 ZBTB33Q86T24 672 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 IL27Q8NEV9 243 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 ZNF837Q96EG3 531 aaPredicted RBP7.77□□□□□ -1.17
NPC1-213ENST00000591955 GMCL1Q96IK5 515 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 TMPRSS4Q9NRS4 437 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 SIGLEC1Q9BZZ2 1709 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 CARMIL2Q6F5E8 1435 aa7.77□□□□□ -1.17
NPC1-213ENST00000591955 RAPGEF2Q9Y4G8 1499 aa7.76□□□□□ -1.17
NPC1-213ENST00000591955 PTGIRP43119 386 aa7.76□□□□□ -1.17
NPC1-213ENST00000591955 HSPA2P54652 639 aa7.76□□□□□ -1.17
NPC1-213ENST00000591955 L1TD1Q5T7N2 865 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms