RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 USHBP1Q8N6Y0 703 aa14.43□□□□□ -0.1
VPS4B-207ENST00000591519 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
VPS4B-207ENST00000591519 KIF20BQ96Q89 1820 aa14.43□□□□□ -0.1
VPS4B-207ENST00000591519 NSD3Q9BZ95 1437 aa14.42□□□□□ -0.1
VPS4B-207ENST00000591519 LY75O60449 1722 aa14.42□□□□□ -0.1
VPS4B-207ENST00000591519 QSER1Q2KHR3 1735 aa14.42□□□□□ -0.1
VPS4B-207ENST00000591519 CCER1Q8TC90 406 aaPredicted RBP14.42□□□□□ -0.1
VPS4B-207ENST00000591519 MAP3K5Q99683 1374 aa14.42□□□□□ -0.1
VPS4B-207ENST00000591519 WASHC2AQ641Q2 1341 aa14.41□□□□□ -0.1
VPS4B-207ENST00000591519 PNPLA7Q6ZV29 1317 aa14.41□□□□□ -0.1
VPS4B-207ENST00000591519 DOT1LQ8TEK3 1739 aa14.41□□□□□ -0.1
VPS4B-207ENST00000591519 C7P10643 843 aa14.41□□□□□ -0.1
VPS4B-207ENST00000591519 HMGB2P26583 209 aaKnown RBP14.41□□□□□ -0.1
VPS4B-207ENST00000591519 EMILIN1Q9Y6C2 1016 aa14.41□□□□□ -0.1
VPS4B-207ENST00000591519 NCAPD2Q15021 1401 aa14.41□□□□□ -0.1
VPS4B-207ENST00000591519 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
VPS4B-207ENST00000591519 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
VPS4B-207ENST00000591519 KCNQ4P56696 695 aa14.4□□□□□ -0.1
VPS4B-207ENST00000591519 TFCP2L1Q9NZI6 479 aa14.4□□□□□ -0.1
VPS4B-207ENST00000591519 CCNL1Q9UK58 526 aaPredicted RBP14.4□□□□□ -0.1
VPS4B-207ENST00000591519 COL24A1Q17RW2 1714 aa14.4□□□□□ -0.1
VPS4B-207ENST00000591519 CYP27B1O15528 508 aa14.39□□□□□ -0.11
VPS4B-207ENST00000591519 POTEJP0CG39 1038 aa14.39□□□□□ -0.11
VPS4B-207ENST00000591519 NKX1-1Q15270 411 aaPredicted RBP14.39□□□□□ -0.11
VPS4B-207ENST00000591519 POLKQ9UBT6 870 aa14.39□□□□□ -0.11
VPS4B-207ENST00000591519 NUBP1P53384 320 aa14.38□□□□□ -0.11
VPS4B-207ENST00000591519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.116e-6■■■□□ 18.4
VPS4B-207ENST00000591519 MAP2P11137 1827 aaKnown RBP14.37□□□□□ -0.11
VPS4B-207ENST00000591519 EYA1Q99502 592 aa14.37□□□□□ -0.11
VPS4B-207ENST00000591519 ANKRD26Q9UPS8 1709 aa14.36□□□□□ -0.11
VPS4B-207ENST00000591519 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
VPS4B-207ENST00000591519 POLD1P28340 1107 aa14.36□□□□□ -0.11
VPS4B-207ENST00000591519 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
VPS4B-207ENST00000591519 MPRIPQ6WCQ1 1025 aa14.35□□□□□ -0.11
VPS4B-207ENST00000591519 COL23A1Q86Y22 540 aaPredicted RBP14.35□□□□□ -0.11
VPS4B-207ENST00000591519 SMARCC1Q92922 1105 aaPredicted RBP14.35□□□□□ -0.11
VPS4B-207ENST00000591519 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
VPS4B-207ENST00000591519 SPG7Q9UQ90 795 aa14.35□□□□□ -0.11
VPS4B-207ENST00000591519 TUBGCP6Q96RT7 1819 aa14.34□□□□□ -0.11
VPS4B-207ENST00000591519 PIGBQ92521 554 aa14.34□□□□□ -0.11
VPS4B-207ENST00000591519 PKD1L3Q7Z443 1732 aa14.34□□□□□ -0.11
VPS4B-207ENST00000591519 HSPA5P11021 654 aaKnown RBP14.33□□□□□ -0.12
VPS4B-207ENST00000591519 FLAD1Q8NFF5 587 aa14.33□□□□□ -0.12
VPS4B-207ENST00000591519 PALLDQ8WX93 1383 aa14.33□□□□□ -0.12
VPS4B-207ENST00000591519 PLEKHG2Q9H7P9 1386 aa14.33□□□□□ -0.12
VPS4B-207ENST00000591519 UTRNP46939 3433 aa14.32□□□□□ -0.12
VPS4B-207ENST00000591519 TIE1P35590 1138 aa14.32□□□□□ -0.12
VPS4B-207ENST00000591519 PANK3Q9H999 370 aa14.32□□□□□ -0.12
VPS4B-207ENST00000591519 ITGB4P16144 1822 aa14.31□□□□□ -0.12
VPS4B-207ENST00000591519 EIF4A2Q14240 407 aaKnown RBP14.31□□□□□ -0.12
VPS4B-207ENST00000591519 IFNL2Q8IZJ0 200 aa14.31□□□□□ -0.12
VPS4B-207ENST00000591519 PCDHB13Q9Y5F0 798 aa14.31□□□□□ -0.12
VPS4B-207ENST00000591519 CHD4Q14839 1912 aa14.31□□□□□ -0.12
VPS4B-207ENST00000591519 TAF1LQ8IZX4 1826 aa14.3□□□□□ -0.12
VPS4B-207ENST00000591519 TTLL13PA6NNM8 815 aa14.3□□□□□ -0.12
VPS4B-207ENST00000591519 PHKG2P15735 406 aa14.3□□□□□ -0.12
VPS4B-207ENST00000591519 ZNF784Q8NCA9 323 aaPredicted RBP14.3□□□□□ -0.12
VPS4B-207ENST00000591519 POLR3GLQ9BT43 218 aa14.3□□□□□ -0.12
VPS4B-207ENST00000591519 C5P01031 1676 aa14.3□□□□□ -0.12
VPS4B-207ENST00000591519 TOGARAM1Q9Y4F4 1720 aa14.29□□□□□ -0.12
VPS4B-207ENST00000591519 POTEFA5A3E0 1075 aa14.29□□□□□ -0.12
VPS4B-207ENST00000591519 GPR162Q16538 588 aa14.29□□□□□ -0.12
VPS4B-207ENST00000591519 LOC102724428A0A0B4J2F2 783 aa14.28□□□□□ -0.12
VPS4B-207ENST00000591519 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
VPS4B-207ENST00000591519 SIK1P57059 783 aa14.28□□□□□ -0.12
VPS4B-207ENST00000591519 IGSF1Q8N6C5 1336 aa14.28□□□□□ -0.12
VPS4B-207ENST00000591519 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
VPS4B-207ENST00000591519 NLGN2Q8NFZ4 835 aa14.27□□□□□ -0.13
VPS4B-207ENST00000591519 TMOD3Q9NYL9 352 aa14.27□□□□□ -0.13
VPS4B-207ENST00000591519 ASAP1Q9ULH1 1129 aa14.27□□□□□ -0.13
VPS4B-207ENST00000591519 AK7Q96M32 723 aa14.26□□□□□ -0.13
VPS4B-207ENST00000591519 ATG3Q9NT62 314 aa14.26□□□□□ -0.13
VPS4B-207ENST00000591519 CD2APQ9Y5K6 639 aa14.26□□□□□ -0.13
VPS4B-207ENST00000591519 C4BP0C0L5 1744 aa14.25□□□□□ -0.13
VPS4B-207ENST00000591519 ERVV-2B6SEH9 535 aa14.25□□□□□ -0.13
VPS4B-207ENST00000591519 AMIGO3Q86WK7 504 aa14.25□□□□□ -0.13
VPS4B-207ENST00000591519 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
VPS4B-207ENST00000591519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.24□□□□□ -0.13
VPS4B-207ENST00000591519 GRIN3BO60391 1043 aa14.24□□□□□ -0.13
VPS4B-207ENST00000591519 HSP90AB1P08238 724 aaKnown RBP14.24□□□□□ -0.13
VPS4B-207ENST00000591519 SSFA2P28290 1259 aa14.24□□□□□ -0.13
VPS4B-207ENST00000591519 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
VPS4B-207ENST00000591519 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
VPS4B-207ENST00000591519 MSL1Q68DK7 614 aa14.24□□□□□ -0.13
VPS4B-207ENST00000591519 MORC1Q86VD1 984 aa14.24□□□□□ -0.13
VPS4B-207ENST00000591519 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
VPS4B-207ENST00000591519 LINC00116Q8NCU8 138 aa14.24□□□□□ -0.13
VPS4B-207ENST00000591519 UBR3Q6ZT12 1888 aa14.23□□□□□ -0.13
VPS4B-207ENST00000591519 ATP6V1AP38606 617 aa14.23□□□□□ -0.13
VPS4B-207ENST00000591519 ITPK1Q13572 414 aa14.23□□□□□ -0.13
VPS4B-207ENST00000591519 DCAF5Q96JK2 942 aa14.23□□□□□ -0.13
VPS4B-207ENST00000591519 KNSTRNQ9Y448 316 aa14.23□□□□□ -0.13
VPS4B-207ENST00000591519 YBX3P16989 372 aaKnown RBP eCLIP14.22□□□□□ -0.13
VPS4B-207ENST00000591519 TRIM35Q9UPQ4 493 aa14.22□□□□□ -0.13
VPS4B-207ENST00000591519 COLQQ9Y215 455 aaPredicted RBP14.22□□□□□ -0.13
VPS4B-207ENST00000591519 AMER1Q5JTC6 1135 aaPredicted RBP14.21□□□□□ -0.13
VPS4B-207ENST00000591519 MAMSTRQ6ZN01 415 aa14.21□□□□□ -0.13
VPS4B-207ENST00000591519 PHF14O94880 888 aa14.2□□□□□ -0.14
VPS4B-207ENST00000591519 IL13P35225 146 aa14.2□□□□□ -0.14
VPS4B-207ENST00000591519 RC3H1Q5TC82 1133 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms