RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 LGR6Q9HBX8 967 aa14.24□□□□□ -0.13
TPM4-213ENST00000591226 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
TPM4-213ENST00000591226 PLEKHO1Q53GL0 409 aaPredicted RBP14.23□□□□□ -0.13
TPM4-213ENST00000591226 IL27Q8NEV9 243 aa14.23□□□□□ -0.13
TPM4-213ENST00000591226 TNS3Q68CZ2 1445 aa14.23□□□□□ -0.13
TPM4-213ENST00000591226 PAXIP1Q6ZW49 1069 aaPredicted RBP14.23□□□□□ -0.13
TPM4-213ENST00000591226 NUCB1Q02818 461 aa14.22□□□□□ -0.13
TPM4-213ENST00000591226 CABLES1Q8TDN4 633 aa14.22□□□□□ -0.13
TPM4-213ENST00000591226 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
TPM4-213ENST00000591226 ERBB3P21860 1342 aa14.22□□□□□ -0.13
TPM4-213ENST00000591226 AKAP4Q5JQC9 854 aa14.22□□□□□ -0.13
TPM4-213ENST00000591226 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
TPM4-213ENST00000591226 SEC24BO95487 1268 aa14.21□□□□□ -0.13
TPM4-213ENST00000591226 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.13
TPM4-213ENST00000591226 F6X3S4 739 aa14.21□□□□□ -0.13
TPM4-213ENST00000591226 CCDC30Q5VVM6 783 aa14.21□□□□□ -0.13
TPM4-213ENST00000591226 MPRIPQ6WCQ1 1025 aa14.21□□□□□ -0.13
TPM4-213ENST00000591226 LNPKQ9C0E8 428 aa14.21□□□□□ -0.13
TPM4-213ENST00000591226 KDM3BQ7LBC6 1761 aa14.21□□□□□ -0.14
TPM4-213ENST00000591226 ZNF335Q9H4Z2 1342 aaPredicted RBP14.2□□□□□ -0.14
TPM4-213ENST00000591226 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
TPM4-213ENST00000591226 GCC1Q96CN9 775 aa14.2□□□□□ -0.14
TPM4-213ENST00000591226 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
TPM4-213ENST00000591226 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
TPM4-213ENST00000591226 COL18A1P39060 1754 aa14.19□□□□□ -0.14
TPM4-213ENST00000591226 C1orf141Q5JVX7 400 aa14.19□□□□□ -0.14
TPM4-213ENST00000591226 BRINP3Q76B58 766 aa14.19□□□□□ -0.14
TPM4-213ENST00000591226 ATP10DQ9P241 1426 aa14.19□□□□□ -0.14
TPM4-213ENST00000591226 CRYBG1Q9Y4K1 1723 aa14.19□□□□□ -0.14
TPM4-213ENST00000591226 SLC4A10Q6U841 1118 aa14.19□□□□□ -0.14
TPM4-213ENST00000591226 DDRGK1Q96HY6 314 aa14.19□□□□□ -0.14
TPM4-213ENST00000591226 MEIS3Q99687 375 aa14.19□□□□□ -0.14
TPM4-213ENST00000591226 TEFQ10587 303 aa14.18□□□□□ -0.14
TPM4-213ENST00000591226 FLIIQ13045 1269 aa14.18□□□□□ -0.14
TPM4-213ENST00000591226 ANKRD45Q5TZF3 282 aa14.18□□□□□ -0.14
TPM4-213ENST00000591226 RNMTO43148 476 aaKnown RBP14.18□□□□□ -0.14
TPM4-213ENST00000591226 CACNA1FO60840 1977 aa14.18□□□□□ -0.14
TPM4-213ENST00000591226 KCNQ3O43525 872 aa14.18□□□□□ -0.14
TPM4-213ENST00000591226 EIF4A1P60842 406 aaKnown RBP14.18□□□□□ -0.14
TPM4-213ENST00000591226 CHRNA2Q15822 529 aa14.18□□□□□ -0.14
TPM4-213ENST00000591226 HDGFL1Q5TGJ6 251 aa14.18□□□□□ -0.14
TPM4-213ENST00000591226 NLRP2Q9NX02 1062 aa14.18□□□□□ -0.14
TPM4-213ENST00000591226 FKBP5Q13451 457 aaPredicted RBP14.17□□□□□ -0.14
TPM4-213ENST00000591226 NBR1Q14596 966 aa14.17□□□□□ -0.14
TPM4-213ENST00000591226 BTBD11A6QL63 1104 aa14.17□□□□□ -0.14
TPM4-213ENST00000591226 CCT4P50991 539 aaKnown RBP14.17□□□□□ -0.14
TPM4-213ENST00000591226 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
TPM4-213ENST00000591226 CEP85Q6P2H3 762 aa14.16□□□□□ -0.14
TPM4-213ENST00000591226 ANKRD44Q8N8A2 993 aa14.16□□□□□ -0.14
TPM4-213ENST00000591226 RAPGEF4Q8WZA2 1011 aa14.15□□□□□ -0.14
TPM4-213ENST00000591226 CSB-PGBD3P0DP91 1061 aa14.15□□□□□ -0.14
TPM4-213ENST00000591226 MEGF6O75095 1541 aa14.14□□□□□ -0.15
TPM4-213ENST00000591226 ABCC6O95255 1503 aa14.14□□□□□ -0.15
TPM4-213ENST00000591226 EIF2S2P20042 333 aaKnown RBP14.14□□□□□ -0.15
TPM4-213ENST00000591226 RPAP2Q8IXW5 612 aaPredicted RBP14.14□□□□□ -0.15
TPM4-213ENST00000591226 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
TPM4-213ENST00000591226 DCTPP1Q9H773 170 aa14.14□□□□□ -0.15
TPM4-213ENST00000591226 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
TPM4-213ENST00000591226 CPDO75976 1380 aa14.13□□□□□ -0.15
TPM4-213ENST00000591226 SIPA1L3O60292 1781 aaPredicted RBP14.13□□□□□ -0.15
TPM4-213ENST00000591226 PHAXQ9H814 394 aaKnown RBP14.13□□□□□ -0.15
TPM4-213ENST00000591226 HOXB7P09629 217 aa14.13□□□□□ -0.15
TPM4-213ENST00000591226 N4BP2Q86UW6 1770 aaPredicted RBP14.13□□□□□ -0.15
TPM4-213ENST00000591226 TATP17735 454 aaPredicted RBP14.12□□□□□ -0.15
TPM4-213ENST00000591226 SLC4A3P48751 1232 aa14.12□□□□□ -0.15
TPM4-213ENST00000591226 CHPF2Q9P2E5 772 aa14.12□□□□□ -0.15
TPM4-213ENST00000591226 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
TPM4-213ENST00000591226 UPF2Q9HAU5 1272 aaKnown RBP14.11□□□□□ -0.15
TPM4-213ENST00000591226 SOS2Q07890 1332 aaPredicted RBP14.11□□□□□ -0.15
TPM4-213ENST00000591226 KDM6AO15550 1401 aaPredicted RBP14.11□□□□□ -0.15
TPM4-213ENST00000591226 GNAI2P04899 355 aa14.1□□□□□ -0.15
TPM4-213ENST00000591226 BMP2KLQ5H9B9 411 aa14.1□□□□□ -0.15
TPM4-213ENST00000591226 TBC1D32Q96NH3 1257 aa14.1□□□□□ -0.15
TPM4-213ENST00000591226 SCN11AQ9UI33 1791 aa14.1□□□□□ -0.15
TPM4-213ENST00000591226 ANXA1P04083 346 aa14.09□□□□□ -0.15
TPM4-213ENST00000591226 PHKG2P15735 406 aa14.09□□□□□ -0.15
TPM4-213ENST00000591226 SPG7Q9UQ90 795 aa14.09□□□□□ -0.15
TPM4-213ENST00000591226 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
TPM4-213ENST00000591226 GIGYF1O75420 1035 aaPredicted RBP14.08□□□□□ -0.15
TPM4-213ENST00000591226 MFAP1P55081 439 aaKnown RBP14.08□□□□□ -0.15
TPM4-213ENST00000591226 PRDM11Q9NQV5 511 aa14.08□□□□□ -0.15
TPM4-213ENST00000591226 PRAMEF22A3QJZ6 481 aa14.08□□□□□ -0.16
TPM4-213ENST00000591226 APBB1O00213 710 aa14.08□□□□□ -0.16
TPM4-213ENST00000591226 HMMRO75330 724 aa14.08□□□□□ -0.16
TPM4-213ENST00000591226 GNAI3P08754 354 aa14.08□□□□□ -0.16
TPM4-213ENST00000591226 CHMP4AQ9BY43 222 aa14.08□□□□□ -0.16
TPM4-213ENST00000591226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.08□□□□□ -0.16
TPM4-213ENST00000591226 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
TPM4-213ENST00000591226 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
TPM4-213ENST00000591226 C16orf71Q8IYS4 520 aaPredicted RBP14.07□□□□□ -0.16
TPM4-213ENST00000591226 SMARCA5O60264 1052 aaPredicted RBP14.07□□□□□ -0.16
TPM4-213ENST00000591226 PLEKHM2Q8IWE5 1019 aa14.07□□□□□ -0.16
TPM4-213ENST00000591226 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
TPM4-213ENST00000591226 USP44Q9H0E7 712 aa14.07□□□□□ -0.16
TPM4-213ENST00000591226 SLC52A2Q9HAB3 445 aa14.07□□□□□ -0.16
TPM4-213ENST00000591226 CYP27B1O15528 508 aa14.06□□□□□ -0.16
TPM4-213ENST00000591226 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
TPM4-213ENST00000591226 SLC39A6Q13433 755 aa14.06□□□□□ -0.16
TPM4-213ENST00000591226 PROSER3Q2NL68 480 aa14.06□□□□□ -0.16
TPM4-213ENST00000591226 OTUD7AQ8TE49 926 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms