RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 IL25Q9H293 177 aa13.21□□□□□ -0.29
LINC01140-210ENST00000590653 ZFYVE9O95405 1425 aa13.21□□□□□ -0.29
LINC01140-210ENST00000590653 IGSF3O75054 1194 aa13.21□□□□□ -0.3
LINC01140-210ENST00000590653 GNAI2P04899 355 aa13.21□□□□□ -0.3
LINC01140-210ENST00000590653 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.3
LINC01140-210ENST00000590653 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.3
LINC01140-210ENST00000590653 ABCC3O15438 1527 aa13.2□□□□□ -0.3
LINC01140-210ENST00000590653 MCM2P49736 904 aa13.2□□□□□ -0.3
LINC01140-210ENST00000590653 POGZQ7Z3K3 1410 aa13.2□□□□□ -0.3
LINC01140-210ENST00000590653 EIF4A2Q14240 407 aaKnown RBP13.19□□□□□ -0.3
LINC01140-210ENST00000590653 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
LINC01140-210ENST00000590653 MYRIPQ8NFW9 859 aa13.19□□□□□ -0.3
LINC01140-210ENST00000590653 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
LINC01140-210ENST00000590653 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
LINC01140-210ENST00000590653 CHL1O00533 1208 aa13.19□□□□□ -0.3
LINC01140-210ENST00000590653 MLECQ14165 292 aa13.19□□□□□ -0.3
LINC01140-210ENST00000590653 MTERF4Q7Z6M4 381 aaKnown RBP13.19□□□□□ -0.3
LINC01140-210ENST00000590653 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
LINC01140-210ENST00000590653 CUL4AQ13619 759 aa13.19□□□□□ -0.3
LINC01140-210ENST00000590653 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
LINC01140-210ENST00000590653 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
LINC01140-210ENST00000590653 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
LINC01140-210ENST00000590653 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
LINC01140-210ENST00000590653 HAP1P54257 671 aaPredicted RBP13.18□□□□□ -0.3
LINC01140-210ENST00000590653 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
LINC01140-210ENST00000590653 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
LINC01140-210ENST00000590653 PTPRMP28827 1452 aa13.18□□□□□ -0.3
LINC01140-210ENST00000590653 PIBF1Q8WXW3 757 aa13.18□□□□□ -0.3
LINC01140-210ENST00000590653 CCDC183Q5T5S1 534 aa13.17□□□□□ -0.3
LINC01140-210ENST00000590653 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
LINC01140-210ENST00000590653 SPG7Q9UQ90 795 aa13.17□□□□□ -0.3
LINC01140-210ENST00000590653 KIF3AQ9Y496 699 aa13.17□□□□□ -0.3
LINC01140-210ENST00000590653 NEXMIFQ5QGS0 1516 aa13.17□□□□□ -0.3
LINC01140-210ENST00000590653 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
LINC01140-210ENST00000590653 VPS37CA5D8V6 355 aaPredicted RBP13.17□□□□□ -0.3
LINC01140-210ENST00000590653 PTPRCP08575 1304 aa13.17□□□□□ -0.3
LINC01140-210ENST00000590653 LMTK2Q8IWU2 1503 aa13.16□□□□□ -0.3
LINC01140-210ENST00000590653 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
LINC01140-210ENST00000590653 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
LINC01140-210ENST00000590653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
LINC01140-210ENST00000590653 CWC27Q6UX04 472 aaKnown RBP13.16□□□□□ -0.3
LINC01140-210ENST00000590653 SMAP1Q8IYB5 467 aaPredicted RBP13.16□□□□□ -0.3
LINC01140-210ENST00000590653 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
LINC01140-210ENST00000590653 ARHGAP31Q2M1Z3 1444 aa13.16□□□□□ -0.3
LINC01140-210ENST00000590653 SURF6O75683 361 aaKnown RBP13.16□□□□□ -0.3
LINC01140-210ENST00000590653 CAMK4Q16566 473 aa13.16□□□□□ -0.3
LINC01140-210ENST00000590653 INTS4Q96HW7 963 aaKnown RBP13.16□□□□□ -0.3
LINC01140-210ENST00000590653 RGS12O14924 1447 aa13.15□□□□□ -0.3
LINC01140-210ENST00000590653 ARHGEF40Q8TER5 1519 aa13.15□□□□□ -0.3
LINC01140-210ENST00000590653 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
LINC01140-210ENST00000590653 SYT1P21579 422 aa13.15□□□□□ -0.3
LINC01140-210ENST00000590653 CCT4P50991 539 aaKnown RBP13.15□□□□□ -0.3
LINC01140-210ENST00000590653 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
LINC01140-210ENST00000590653 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
LINC01140-210ENST00000590653 CCDC83Q8IWF9 413 aa13.15□□□□□ -0.3
LINC01140-210ENST00000590653 OSBPL3Q9H4L5 887 aa13.15□□□□□ -0.3
LINC01140-210ENST00000590653 PYCARDQ9ULZ3 195 aa13.15□□□□□ -0.3
LINC01140-210ENST00000590653 TCHHQ07283 1943 aa13.15□□□□□ -0.3
LINC01140-210ENST00000590653 STX6O43752 255 aa13.15□□□□□ -0.31
LINC01140-210ENST00000590653 ATP2B3Q16720 1220 aa13.15□□□□□ -0.31
LINC01140-210ENST00000590653 KIF24Q5T7B8 1368 aa13.14□□□□□ -0.31
LINC01140-210ENST00000590653 ZSCAN22P10073 491 aaPredicted RBP13.14□□□□□ -0.31
LINC01140-210ENST00000590653 AK2P54819 239 aa13.14□□□□□ -0.31
LINC01140-210ENST00000590653 HMGN5P82970 282 aaKnown RBP13.14□□□□□ -0.31
LINC01140-210ENST00000590653 DRC7Q8IY82 874 aa13.14□□□□□ -0.31
LINC01140-210ENST00000590653 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
LINC01140-210ENST00000590653 FAM184AQ8NB25 1140 aa13.14□□□□□ -0.31
LINC01140-210ENST00000590653 KDM4AO75164 1064 aa13.14□□□□□ -0.31
LINC01140-210ENST00000590653 FAM173BQ6P4H8 233 aa13.14□□□□□ -0.31
LINC01140-210ENST00000590653 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
LINC01140-210ENST00000590653 AP5Z1O43299 807 aa13.13□□□□□ -0.31
LINC01140-210ENST00000590653 FLIIQ13045 1269 aa13.13□□□□□ -0.31
LINC01140-210ENST00000590653 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
LINC01140-210ENST00000590653 PRIMPOLQ96LW4 560 aa13.13□□□□□ -0.31
LINC01140-210ENST00000590653 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
LINC01140-210ENST00000590653 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
LINC01140-210ENST00000590653 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
LINC01140-210ENST00000590653 NECAB1Q8N987 351 aa13.13□□□□□ -0.31
LINC01140-210ENST00000590653 RIOK3O14730 519 aaKnown RBP13.12□□□□□ -0.31
LINC01140-210ENST00000590653 LARGE1O95461 756 aa13.12□□□□□ -0.31
LINC01140-210ENST00000590653 ANAPC15P60006 121 aa13.12□□□□□ -0.31
LINC01140-210ENST00000590653 PDCL2Q8N4E4 241 aa13.12□□□□□ -0.31
LINC01140-210ENST00000590653 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC01140-210ENST00000590653 UBE2HP62256 183 aa13.12□□□□□ -0.31
LINC01140-210ENST00000590653 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
LINC01140-210ENST00000590653 UVSSAQ2YD98 709 aa13.12□□□□□ -0.31
LINC01140-210ENST00000590653 GNAI3P08754 354 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
LINC01140-210ENST00000590653 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
LINC01140-210ENST00000590653 RUFY3Q7L099 469 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
LINC01140-210ENST00000590653 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 SIGLEC1Q9BZZ2 1709 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 F13A1P00488 732 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 ZSCAN20P17040 1043 aaPredicted RBP13.11□□□□□ -0.31
LINC01140-210ENST00000590653 GJB2P29033 226 aa13.11□□□□□ -0.31
LINC01140-210ENST00000590653 PTGS1P23219 599 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms