RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 DOT1LQ8TEK3 1739 aa9.33□□□□□ -0.92
DNMT1-222ENST00000590619 C5P01031 1676 aa9.32□□□□□ -0.92
DNMT1-222ENST00000590619 CGNL1Q0VF96 1302 aa9.32□□□□□ -0.92
DNMT1-222ENST00000590619 ZC3H4Q9UPT8 1303 aaKnown RBP9.32□□□□□ -0.92
DNMT1-222ENST00000590619 MEGF6O75095 1541 aa9.32□□□□□ -0.92
DNMT1-222ENST00000590619 KIAA1551Q9HCM1 1747 aa9.32□□□□□ -0.92
DNMT1-222ENST00000590619 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
DNMT1-222ENST00000590619 USHBP1Q8N6Y0 703 aa9.32□□□□□ -0.92
DNMT1-222ENST00000590619 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
DNMT1-222ENST00000590619 SBNO2Q9Y2G9 1366 aa9.32□□□□□ -0.92
DNMT1-222ENST00000590619 TOGARAM1Q9Y4F4 1720 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 POTEJP0CG39 1038 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 TATP17735 454 aaPredicted RBP9.31□□□□□ -0.92
DNMT1-222ENST00000590619 LMNB1P20700 586 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 AMPHP49418 695 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 RAPGEF4Q8WZA2 1011 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 RTCBQ9Y3I0 505 aaKnown RBP9.31□□□□□ -0.92
DNMT1-222ENST00000590619 QRICH2Q9H0J4 1663 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 TAF1LQ8IZX4 1826 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 MAP3K19Q56UN5 1328 aa9.31□□□□□ -0.92
DNMT1-222ENST00000590619 UBR3Q6ZT12 1888 aa9.3□□□□□ -0.92
DNMT1-222ENST00000590619 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
DNMT1-222ENST00000590619 SLC12A5Q9H2X9 1139 aa9.3□□□□□ -0.92
DNMT1-222ENST00000590619 PASKQ96RG2 1323 aa9.3□□□□□ -0.92
DNMT1-222ENST00000590619 RFC4P35249 363 aa9.29□□□□□ -0.92
DNMT1-222ENST00000590619 NKX1-1Q15270 411 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-222ENST00000590619 ATG3Q9NT62 314 aa9.29□□□□□ -0.92
DNMT1-222ENST00000590619 KDM6AO15550 1401 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-222ENST00000590619 PCDH11XQ9BZA7 1347 aa9.29□□□□□ -0.92
DNMT1-222ENST00000590619 PCDH11YQ9BZA8 1340 aa9.29□□□□□ -0.92
DNMT1-222ENST00000590619 TMEM88BA6NKF7 163 aa9.28□□□□□ -0.92
DNMT1-222ENST00000590619 RPS6KA4O75676 772 aa9.28□□□□□ -0.92
DNMT1-222ENST00000590619 ITGBL1O95965 494 aaPredicted RBP9.28□□□□□ -0.92
DNMT1-222ENST00000590619 DEFB115Q30KQ5 88 aa9.28□□□□□ -0.92
DNMT1-222ENST00000590619 RC3H1Q5TC82 1133 aaKnown RBP9.28□□□□□ -0.92
DNMT1-222ENST00000590619 TMC1Q8TDI8 760 aa9.28□□□□□ -0.92
DNMT1-222ENST00000590619 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
DNMT1-222ENST00000590619 SBF1O95248 1867 aa9.28□□□□□ -0.92
DNMT1-222ENST00000590619 TNRC6CQ9HCJ0 1690 aaKnown RBP9.27□□□□□ -0.93
DNMT1-222ENST00000590619 ADRA2BP18089 450 aa9.27□□□□□ -0.93
DNMT1-222ENST00000590619 MAP2K1Q02750 393 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-222ENST00000590619 DDR1Q08345 913 aa9.27□□□□□ -0.93
DNMT1-222ENST00000590619 FKBP8Q14318 412 aa9.27□□□□□ -0.93
DNMT1-222ENST00000590619 HDGFL2Q7Z4V5 671 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-222ENST00000590619 CD163L1Q9NR16 1453 aa9.27□□□□□ -0.93
DNMT1-222ENST00000590619 PKD1L3Q7Z443 1732 aa9.26□□□□□ -0.93
DNMT1-222ENST00000590619 DDNO94850 711 aaPredicted RBP9.26□□□□□ -0.93
DNMT1-222ENST00000590619 TM4SF1P30408 202 aa9.26□□□□□ -0.93
DNMT1-222ENST00000590619 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
DNMT1-222ENST00000590619 LTN1O94822 1766 aa9.26□□□□□ -0.93
DNMT1-222ENST00000590619 WDR33Q9C0J8 1336 aaKnown RBP9.26□□□□□ -0.93
DNMT1-222ENST00000590619 BRCA1P38398 1863 aaKnown RBP9.25□□□□□ -0.93
DNMT1-222ENST00000590619 NFKBIEO00221 500 aa9.25□□□□□ -0.93
DNMT1-222ENST00000590619 RRS1Q15050 365 aaKnown RBP9.25□□□□□ -0.93
DNMT1-222ENST00000590619 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
DNMT1-222ENST00000590619 SRP68Q9UHB9 627 aaKnown RBP9.25□□□□□ -0.93
DNMT1-222ENST00000590619 ARFGEF1Q9Y6D6 1849 aa9.25□□□□□ -0.93
DNMT1-222ENST00000590619 FAM208AQ9UK61 1670 aaKnown RBP9.25□□□□□ -0.93
DNMT1-222ENST00000590619 KIAA1210Q9ULL0 1709 aa9.25□□□□□ -0.93
DNMT1-222ENST00000590619 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
DNMT1-222ENST00000590619 RASSF10A6NK89 507 aa9.24□□□□□ -0.93
DNMT1-222ENST00000590619 POLRMTO00411 1230 aaKnown RBP9.24□□□□□ -0.93
DNMT1-222ENST00000590619 HSP90AB2PQ58FF8 381 aa9.24□□□□□ -0.93
DNMT1-222ENST00000590619 COG3Q96JB2 828 aa9.24□□□□□ -0.93
DNMT1-222ENST00000590619 MAP2P11137 1827 aaKnown RBP9.24□□□□□ -0.93
DNMT1-222ENST00000590619 ERFEQ4G0M1 354 aa9.23□□□□□ -0.93
DNMT1-222ENST00000590619 LDHDQ86WU2 507 aa9.23□□□□□ -0.93
DNMT1-222ENST00000590619 TTLL6Q8N841 843 aa9.23□□□□□ -0.93
DNMT1-222ENST00000590619 RBM42Q9BTD8 480 aaKnown RBP9.23□□□□□ -0.93
DNMT1-222ENST00000590619 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
DNMT1-222ENST00000590619 C4AP0C0L4 1744 aa9.22□□□□□ -0.93
DNMT1-222ENST00000590619 TAF1DQ9H5J8 278 aaPredicted RBP9.22□□□□□ -0.93
DNMT1-222ENST00000590619 TERF2IPQ9NYB0 399 aa9.22□□□□□ -0.93
DNMT1-222ENST00000590619 CNTNAP4Q9C0A0 1308 aa9.22□□□□□ -0.93
DNMT1-222ENST00000590619 RGPD2P0DJD1 1756 aa9.22□□□□□ -0.93
DNMT1-222ENST00000590619 EDC4Q6P2E9 1401 aaKnown RBP9.22□□□□□ -0.93
DNMT1-222ENST00000590619 TSKSQ9UJT2 592 aa9.21□□□□□ -0.94
DNMT1-222ENST00000590619 SPG7Q9UQ90 795 aa9.21□□□□□ -0.94
DNMT1-222ENST00000590619 PDE4DIPQ5VU43 2346 aa9.2□□□□□ -0.94
DNMT1-222ENST00000590619 CNTROBQ8N137 903 aa9.2□□□□□ -0.94
DNMT1-222ENST00000590619 USP42Q9H9J4 1324 aaKnown RBP9.2□□□□□ -0.94
DNMT1-222ENST00000590619 ITGB4P16144 1822 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 TNRC18O15417 2968 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-222ENST00000590619 PHKG2P15735 406 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 PRPF38BQ5VTL8 546 aaKnown RBP9.19□□□□□ -0.94
DNMT1-222ENST00000590619 C2CD5Q86YS7 1000 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 IFNL2Q8IZJ0 200 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 L3MBTL2Q969R5 705 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 GPR101Q96P66 508 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-222ENST00000590619 BEGAINQ9BUH8 593 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 CLEC11AQ9Y240 323 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 MON2Q7Z3U7 1717 aa9.19□□□□□ -0.94
DNMT1-222ENST00000590619 IQCA1LA6NCM1 817 aa9.18□□□□□ -0.94
DNMT1-222ENST00000590619 H0YIN7 160 aa9.18□□□□□ -0.94
DNMT1-222ENST00000590619 C21orf2O43822 256 aa9.18□□□□□ -0.94
DNMT1-222ENST00000590619 KDRP35968 1356 aa9.18□□□□□ -0.94
DNMT1-222ENST00000590619 CRKLP46109 303 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms