RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 SIK1P57059 783 aa19.07■□□□□ 0.64
LSM12-203ENST00000590563 SLC12A5Q9H2X9 1139 aa19.07■□□□□ 0.64
LSM12-203ENST00000590563 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
LSM12-203ENST00000590563 AMPHP49418 695 aa19.05■□□□□ 0.64
LSM12-203ENST00000590563 RAPGEF4Q8WZA2 1011 aa19.05■□□□□ 0.64
LSM12-203ENST00000590563 KDM6AO15550 1401 aaPredicted RBP19.04■□□□□ 0.64
LSM12-203ENST00000590563 TATP17735 454 aaPredicted RBP19.04■□□□□ 0.64
LSM12-203ENST00000590563 TMC1Q8TDI8 760 aa19.04■□□□□ 0.64
LSM12-203ENST00000590563 ROCK2O75116 1388 aaKnown RBP19.04■□□□□ 0.64
LSM12-203ENST00000590563 SBF1O95248 1867 aa19.03■□□□□ 0.64
LSM12-203ENST00000590563 CCDC87Q9NVE4 849 aa19.03■□□□□ 0.64
LSM12-203ENST00000590563 FOXN1O15353 648 aa19.02■□□□□ 0.64
LSM12-203ENST00000590563 FAM161AQ3B820 660 aa19.01■□□□□ 0.63
LSM12-203ENST00000590563 NLGN1Q8N2Q7 840 aa19.01■□□□□ 0.63
LSM12-203ENST00000590563 KDRP35968 1356 aa19.01■□□□□ 0.63
LSM12-203ENST00000590563 GYS1P13807 737 aa19■□□□□ 0.63
LSM12-203ENST00000590563 TMF1P82094 1093 aa19■□□□□ 0.63
LSM12-203ENST00000590563 L3MBTL2Q969R5 705 aa19■□□□□ 0.63
LSM12-203ENST00000590563 PIM2Q9P1W9 311 aa19■□□□□ 0.63
LSM12-203ENST00000590563 RRS1Q15050 365 aaKnown RBP18.99■□□□□ 0.63
LSM12-203ENST00000590563 NKX1-1Q15270 411 aaPredicted RBP18.99■□□□□ 0.63
LSM12-203ENST00000590563 COG3Q96JB2 828 aa18.99■□□□□ 0.63
LSM12-203ENST00000590563 PRDM10Q9NQV6 1147 aa18.99■□□□□ 0.63
LSM12-203ENST00000590563 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
LSM12-203ENST00000590563 ASAP1Q9ULH1 1129 aa18.99■□□□□ 0.63
LSM12-203ENST00000590563 SMG6Q86US8 1419 aaKnown RBP18.99■□□□□ 0.63
LSM12-203ENST00000590563 ZC3H4Q9UPT8 1303 aaKnown RBP18.99■□□□□ 0.63
LSM12-203ENST00000590563 ATP6V1AP38606 617 aa18.98■□□□□ 0.63
LSM12-203ENST00000590563 DALRD3Q5D0E6 543 aaKnown RBP18.98■□□□□ 0.63
LSM12-203ENST00000590563 RASSF7Q02833 373 aa18.97■□□□□ 0.63
LSM12-203ENST00000590563 TIAM2Q8IVF5 1701 aa18.97■□□□□ 0.63
LSM12-203ENST00000590563 GLTPD2A6NH11 291 aa18.96■□□□□ 0.63
LSM12-203ENST00000590563 VEGFAP15692 232 aaPredicted RBP18.96■□□□□ 0.63
LSM12-203ENST00000590563 TRAPPC3LQ5T215 181 aa18.96■□□□□ 0.63
LSM12-203ENST00000590563 ARHGEF1Q92888 912 aaKnown RBP18.96■□□□□ 0.63
LSM12-203ENST00000590563 MKRN1Q9UHC7 482 aaKnown RBP18.96■□□□□ 0.63
LSM12-203ENST00000590563 PARP3Q9Y6F1 533 aa18.96■□□□□ 0.63
LSM12-203ENST00000590563 NCAPD2Q15021 1401 aa18.96■□□□□ 0.63
LSM12-203ENST00000590563 COL5A3P25940 1745 aaPredicted RBP18.96■□□□□ 0.63
LSM12-203ENST00000590563 POTECB2RU33 542 aa18.95■□□□□ 0.62
LSM12-203ENST00000590563 SLC4A9Q96Q91 983 aa18.95■□□□□ 0.62
LSM12-203ENST00000590563 RTCBQ9Y3I0 505 aaKnown RBP18.95■□□□□ 0.62
LSM12-203ENST00000590563 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
LSM12-203ENST00000590563 INSRP06213 1382 aa18.94■□□□□ 0.62
LSM12-203ENST00000590563 CHRNA5P30532 468 aa18.94■□□□□ 0.62
LSM12-203ENST00000590563 ADRA2BP18089 450 aa18.93■□□□□ 0.62
LSM12-203ENST00000590563 CREBZFQ9NS37 354 aa18.93■□□□□ 0.62
LSM12-203ENST00000590563 ATG3Q9NT62 314 aa18.93■□□□□ 0.62
LSM12-203ENST00000590563 DDR1Q08345 913 aa18.92■□□□□ 0.62
LSM12-203ENST00000590563 HSP90AB2PQ58FF8 381 aa18.92■□□□□ 0.62
LSM12-203ENST00000590563 TMOD3Q9NYL9 352 aa18.92■□□□□ 0.62
LSM12-203ENST00000590563 CNTNAP1P78357 1384 aa18.92■□□□□ 0.62
LSM12-203ENST00000590563 ABHD8Q96I13 439 aa18.9■□□□□ 0.62
LSM12-203ENST00000590563 CNTNAP4Q9C0A0 1308 aa18.9■□□□□ 0.62
LSM12-203ENST00000590563 LMNB1P20700 586 aa18.89■□□□□ 0.61
LSM12-203ENST00000590563 CTCFP49711 727 aaPredicted RBP18.89■□□□□ 0.61
LSM12-203ENST00000590563 RC3H1Q5TC82 1133 aaKnown RBP18.89■□□□□ 0.61
LSM12-203ENST00000590563 RPS6KA4O75676 772 aa18.88■□□□□ 0.61
LSM12-203ENST00000590563 RFC4P35249 363 aa18.88■□□□□ 0.61
LSM12-203ENST00000590563 PUS7Q96PZ0 661 aaKnown RBP18.88■□□□□ 0.61
LSM12-203ENST00000590563 FLT4P35916 1363 aa18.88■□□□□ 0.61
LSM12-203ENST00000590563 FKBP8Q14318 412 aa18.87■□□□□ 0.61
LSM12-203ENST00000590563 SRP68Q9UHB9 627 aaKnown RBP18.86■□□□□ 0.61
LSM12-203ENST00000590563 ADAMTS7Q9UKP4 1686 aa18.85■□□□□ 0.61
LSM12-203ENST00000590563 MYH14Q7Z406 1995 aaKnown RBP18.85■□□□□ 0.61
LSM12-203ENST00000590563 POTEIP0CG38 1075 aa18.85■□□□□ 0.61
LSM12-203ENST00000590563 POTEJP0CG39 1038 aa18.85■□□□□ 0.61
LSM12-203ENST00000590563 LBX1P52954 281 aa18.85■□□□□ 0.61
LSM12-203ENST00000590563 DLEC1Q9Y238 1755 aa18.85■□□□□ 0.61
LSM12-203ENST00000590563 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
LSM12-203ENST00000590563 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
LSM12-203ENST00000590563 USP42Q9H9J4 1324 aaKnown RBP18.84■□□□□ 0.61
LSM12-203ENST00000590563 POLRMTO00411 1230 aaKnown RBP18.84■□□□□ 0.61
LSM12-203ENST00000590563 PHKG2P15735 406 aa18.84■□□□□ 0.61
LSM12-203ENST00000590563 WBP1LQ9NX94 342 aa18.84■□□□□ 0.61
LSM12-203ENST00000590563 SPG7Q9UQ90 795 aa18.84■□□□□ 0.61
LSM12-203ENST00000590563 NFKBIEO00221 500 aa18.83■□□□□ 0.6
LSM12-203ENST00000590563 FYB1O15117 783 aa18.83■□□□□ 0.6
LSM12-203ENST00000590563 RGS19P49795 217 aa18.83■□□□□ 0.6
LSM12-203ENST00000590563 CHADLQ6NUI6 762 aa18.83■□□□□ 0.6
LSM12-203ENST00000590563 GGNBP2Q9H3C7 697 aa18.83■□□□□ 0.6
LSM12-203ENST00000590563 TONSLQ96HA7 1378 aa18.82■□□□□ 0.6
LSM12-203ENST00000590563 PASKQ96RG2 1323 aa18.82■□□□□ 0.6
LSM12-203ENST00000590563 HSPA8P11142 646 aaKnown RBP18.82■□□□□ 0.6
LSM12-203ENST00000590563 VEGFBP49765 207 aa18.82■□□□□ 0.6
LSM12-203ENST00000590563 MLLT1Q03111 559 aaPredicted RBP18.82■□□□□ 0.6
LSM12-203ENST00000590563 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
LSM12-203ENST00000590563 NRXN2Q9P2S2 1712 aa18.8■□□□□ 0.6
LSM12-203ENST00000590563 TM4SF1P30408 202 aa18.8■□□□□ 0.6
LSM12-203ENST00000590563 RBM42Q9BTD8 480 aaKnown RBP18.8■□□□□ 0.6
LSM12-203ENST00000590563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.6
LSM12-203ENST00000590563 IFNL2Q8IZJ0 200 aa18.79■□□□□ 0.6
LSM12-203ENST00000590563 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
LSM12-203ENST00000590563 CCDC88AQ3V6T2 1871 aa18.79■□□□□ 0.6
LSM12-203ENST00000590563 TJP1Q07157 1748 aa18.78■□□□□ 0.6
LSM12-203ENST00000590563 ANKRD26Q9UPS8 1709 aa18.78■□□□□ 0.6
LSM12-203ENST00000590563 SIN3AQ96ST3 1273 aa18.78■□□□□ 0.6
LSM12-203ENST00000590563 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
LSM12-203ENST00000590563 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.59
LSM12-203ENST00000590563 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms