RNA–Protein interactions for RNA: ENST00000590258.2

TPGS2-210, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2

Gene TPGS2, Length 2,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-210ENST00000590258 SIPA1L3O60292 1781 aaPredicted RBP12.54□□□□□ -0.4
TPGS2-210ENST00000590258 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
TPGS2-210ENST00000590258 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
TPGS2-210ENST00000590258 NHSQ6T4R5 1651 aa12.53□□□□□ -0.4
TPGS2-210ENST00000590258 PAPPAQ13219 1627 aa12.52□□□□□ -0.4
TPGS2-210ENST00000590258 DOT1LQ8TEK3 1739 aa12.52□□□□□ -0.4
TPGS2-210ENST00000590258 SENP3-EIF4A1A0A087X0R7 540 aa12.52□□□□□ -0.41
TPGS2-210ENST00000590258 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
TPGS2-210ENST00000590258 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
TPGS2-210ENST00000590258 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
TPGS2-210ENST00000590258 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
TPGS2-210ENST00000590258 CT47B1P0C2W7 299 aaPredicted RBP12.52□□□□□ -0.41
TPGS2-210ENST00000590258 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
TPGS2-210ENST00000590258 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
TPGS2-210ENST00000590258 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
TPGS2-210ENST00000590258 PIGBQ92521 554 aa12.51□□□□□ -0.41
TPGS2-210ENST00000590258 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
TPGS2-210ENST00000590258 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
TPGS2-210ENST00000590258 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
TPGS2-210ENST00000590258 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
TPGS2-210ENST00000590258 BRWD3Q6RI45 1802 aa12.5□□□□□ -0.41
TPGS2-210ENST00000590258 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
TPGS2-210ENST00000590258 HOXB7P09629 217 aa12.5□□□□□ -0.41
TPGS2-210ENST00000590258 ZNF790Q6PG37 636 aa12.5□□□□□ -0.41
TPGS2-210ENST00000590258 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
TPGS2-210ENST00000590258 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
TPGS2-210ENST00000590258 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
TPGS2-210ENST00000590258 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
TPGS2-210ENST00000590258 EIF4A1P60842 406 aaKnown RBP12.48□□□□□ -0.41
TPGS2-210ENST00000590258 ZNF428Q96B54 188 aa12.48□□□□□ -0.41
TPGS2-210ENST00000590258 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
TPGS2-210ENST00000590258 ACSBG1Q96GR2 724 aa12.48□□□□□ -0.41
TPGS2-210ENST00000590258 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
TPGS2-210ENST00000590258 KCPQ6ZWJ8 1503 aa12.48□□□□□ -0.41
TPGS2-210ENST00000590258 TSR2Q969E8 191 aaKnown RBP12.47□□□□□ -0.41
TPGS2-210ENST00000590258 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
TPGS2-210ENST00000590258 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
TPGS2-210ENST00000590258 UBR2Q8IWV8 1755 aa12.47□□□□□ -0.41
TPGS2-210ENST00000590258 HMGB2P26583 209 aaKnown RBP12.47□□□□□ -0.41
TPGS2-210ENST00000590258 CICQ96RK0 1608 aaPredicted RBP12.47□□□□□ -0.41
TPGS2-210ENST00000590258 SYTL4Q96C24 671 aaPredicted RBP12.46□□□□□ -0.41
TPGS2-210ENST00000590258 ITGB4P16144 1822 aa12.46□□□□□ -0.41
TPGS2-210ENST00000590258 ZNF831Q5JPB2 1677 aa12.46□□□□□ -0.41
TPGS2-210ENST00000590258 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
TPGS2-210ENST00000590258 KCNQ2O43526 872 aa12.45□□□□□ -0.42
TPGS2-210ENST00000590258 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
TPGS2-210ENST00000590258 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
TPGS2-210ENST00000590258 FAM182BQ5T319 152 aa12.45□□□□□ -0.42
TPGS2-210ENST00000590258 TEX13AQ9BXU3 409 aaPredicted RBP12.45□□□□□ -0.42
TPGS2-210ENST00000590258 PALLDQ8WX93 1383 aa12.45□□□□□ -0.42
TPGS2-210ENST00000590258 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
TPGS2-210ENST00000590258 ASAP1Q9ULH1 1129 aa12.45□□□□□ -0.42
TPGS2-210ENST00000590258 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
TPGS2-210ENST00000590258 KCNQ3O43525 872 aa12.44□□□□□ -0.42
TPGS2-210ENST00000590258 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
TPGS2-210ENST00000590258 TWISTNBQ3B726 338 aaPredicted RBP12.44□□□□□ -0.42
TPGS2-210ENST00000590258 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
TPGS2-210ENST00000590258 GIGYF1O75420 1035 aaPredicted RBP12.44□□□□□ -0.42
TPGS2-210ENST00000590258 VAMP4O75379 141 aa12.43□□□□□ -0.42
TPGS2-210ENST00000590258 CCDC125Q86Z20 511 aa12.43□□□□□ -0.42
TPGS2-210ENST00000590258 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
TPGS2-210ENST00000590258 PLSCR1O15162 318 aa12.43□□□□□ -0.42
TPGS2-210ENST00000590258 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
TPGS2-210ENST00000590258 RGPD3A6NKT7 1758 aaPredicted RBP12.42□□□□□ -0.42
TPGS2-210ENST00000590258 RGPD4Q7Z3J3 1758 aa12.42□□□□□ -0.42
TPGS2-210ENST00000590258 TRIM37O94972 964 aa12.42□□□□□ -0.42
TPGS2-210ENST00000590258 BTAF1O14981 1849 aa12.42□□□□□ -0.42
TPGS2-210ENST00000590258 ERBB4Q15303 1308 aa12.42□□□□□ -0.42
TPGS2-210ENST00000590258 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
TPGS2-210ENST00000590258 SLC27A3Q5K4L6 730 aa12.41□□□□□ -0.42
TPGS2-210ENST00000590258 LOC102724428A0A0B4J2F2 783 aa12.41□□□□□ -0.42
TPGS2-210ENST00000590258 SIK1P57059 783 aa12.41□□□□□ -0.42
TPGS2-210ENST00000590258 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
TPGS2-210ENST00000590258 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
TPGS2-210ENST00000590258 TNS1Q9HBL0 1735 aaKnown RBP12.4□□□□□ -0.42
TPGS2-210ENST00000590258 PTF1AQ7RTS3 328 aa12.4□□□□□ -0.42
TPGS2-210ENST00000590258 LAMB4A4D0S4 1761 aa12.4□□□□□ -0.42
TPGS2-210ENST00000590258 LY75O60449 1722 aa12.39□□□□□ -0.43
TPGS2-210ENST00000590258 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
TPGS2-210ENST00000590258 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
TPGS2-210ENST00000590258 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
TPGS2-210ENST00000590258 STARD3NLO95772 234 aa12.39□□□□□ -0.43
TPGS2-210ENST00000590258 RARSP54136 660 aaKnown RBP12.39□□□□□ -0.43
TPGS2-210ENST00000590258 RCAN3Q9UKA8 241 aa12.39□□□□□ -0.43
TPGS2-210ENST00000590258 C5P01031 1676 aa12.39□□□□□ -0.43
TPGS2-210ENST00000590258 TJP1Q07157 1748 aa12.38□□□□□ -0.43
TPGS2-210ENST00000590258 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
TPGS2-210ENST00000590258 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
TPGS2-210ENST00000590258 APBA3O96018 575 aa12.38□□□□□ -0.43
TPGS2-210ENST00000590258 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
TPGS2-210ENST00000590258 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
TPGS2-210ENST00000590258 CNTNAP4Q9C0A0 1308 aa12.37□□□□□ -0.43
TPGS2-210ENST00000590258 CYP19A1P11511 503 aaPredicted RBP12.37□□□□□ -0.43
TPGS2-210ENST00000590258 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
TPGS2-210ENST00000590258 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
TPGS2-210ENST00000590258 DBF4Q9UBU7 674 aaPredicted RBP12.37□□□□□ -0.43
TPGS2-210ENST00000590258 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
TPGS2-210ENST00000590258 RREB1Q92766 1687 aa12.36□□□□□ -0.43
TPGS2-210ENST00000590258 ELL2O00472 640 aaPredicted RBP12.36□□□□□ -0.43
TPGS2-210ENST00000590258 DNAJC10Q8IXB1 793 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms