RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 ITPK1Q13572 414 aa24.2■■□□□ 1.46
CIRBP-227ENST00000590188 COL23A1Q86Y22 540 aaPredicted RBP24.2■■□□□ 1.46
CIRBP-227ENST00000590188 NFATC2IPQ8NCF5 419 aa24.2■■□□□ 1.46
CIRBP-227ENST00000590188 LGR6Q9HBX8 967 aa24.2■■□□□ 1.46
CIRBP-227ENST00000590188 C4BP0C0L5 1744 aa24.2■■□□□ 1.46
CIRBP-227ENST00000590188 PHF14O94880 888 aa24.19■■□□□ 1.46
CIRBP-227ENST00000590188 SGIP1Q9BQI5 828 aa24.18■■□□□ 1.46
CIRBP-227ENST00000590188 AMIGO3Q86WK7 504 aa24.17■■□□□ 1.46
CIRBP-227ENST00000590188 NUDCQ9Y266 331 aa24.17■■□□□ 1.46
CIRBP-227ENST00000590188 SCN11AQ9UI33 1791 aa24.16■■□□□ 1.46
CIRBP-227ENST00000590188 RNMTO43148 476 aaKnown RBP24.16■■□□□ 1.46
CIRBP-227ENST00000590188 U2AF1L5P0DN76 240 aaPredicted RBP24.16■■□□□ 1.46
CIRBP-227ENST00000590188 U2AF1Q01081 240 aaKnown RBP eCLIP24.16■■□□□ 1.467e-7■■■■□ 23.3
CIRBP-227ENST00000590188 MSL1Q68DK7 614 aa24.16■■□□□ 1.46
CIRBP-227ENST00000590188 SLC16A10Q8TF71 515 aa24.16■■□□□ 1.46
CIRBP-227ENST00000590188 SLC4A9Q96Q91 983 aa24.16■■□□□ 1.46
CIRBP-227ENST00000590188 PTCD1O75127 700 aaKnown RBP24.15■■□□□ 1.46
CIRBP-227ENST00000590188 PRKAR2BP31323 418 aa24.15■■□□□ 1.46
CIRBP-227ENST00000590188 ARXQ96QS3 562 aa24.15■■□□□ 1.46
CIRBP-227ENST00000590188 KLHL34Q8N239 644 aa24.14■■□□□ 1.45
CIRBP-227ENST00000590188 FHDC1Q9C0D6 1143 aaPredicted RBP24.14■■□□□ 1.45
CIRBP-227ENST00000590188 GNPATO15228 680 aa24.13■■□□□ 1.45
CIRBP-227ENST00000590188 POLD1P28340 1107 aa24.13■■□□□ 1.45
CIRBP-227ENST00000590188 RSPH6AQ9H0K4 717 aa24.13■■□□□ 1.45
CIRBP-227ENST00000590188 SLC52A2Q9HAB3 445 aa24.13■■□□□ 1.45
CIRBP-227ENST00000590188 HMGB2P26583 209 aaKnown RBP24.12■■□□□ 1.45
CIRBP-227ENST00000590188 PHACTR3Q96KR7 559 aa24.12■■□□□ 1.45
CIRBP-227ENST00000590188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.11■■□□□ 1.45
CIRBP-227ENST00000590188 SLC39A6Q13433 755 aa24.11■■□□□ 1.45
CIRBP-227ENST00000590188 GAS2L2Q8NHY3 880 aa24.11■■□□□ 1.45
CIRBP-227ENST00000590188 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
CIRBP-227ENST00000590188 FLAD1Q8NFF5 587 aa24.1■■□□□ 1.45
CIRBP-227ENST00000590188 MAP3K5Q99683 1374 aa24.1■■□□□ 1.45
CIRBP-227ENST00000590188 UBR3Q6ZT12 1888 aa24.1■■□□□ 1.45
CIRBP-227ENST00000590188 MRC1P22897 1456 aa24.08■■□□□ 1.45
CIRBP-227ENST00000590188 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
CIRBP-227ENST00000590188 SYT17Q9BSW7 474 aa24.08■■□□□ 1.45
CIRBP-227ENST00000590188 SSFA2P28290 1259 aa24.07■■□□□ 1.44
CIRBP-227ENST00000590188 ZEB1P37275 1124 aaPredicted RBP24.06■■□□□ 1.44
CIRBP-227ENST00000590188 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
CIRBP-227ENST00000590188 ADAMTS7Q9UKP4 1686 aa24.05■■□□□ 1.44
CIRBP-227ENST00000590188 COL5A3P25940 1745 aaPredicted RBP24.04■■□□□ 1.44
CIRBP-227ENST00000590188 COL24A1Q17RW2 1714 aa24.04■■□□□ 1.44
CIRBP-227ENST00000590188 RTCBQ9Y3I0 505 aaKnown RBP24.04■■□□□ 1.44
CIRBP-227ENST00000590188 ZNF831Q5JPB2 1677 aa24.03■■□□□ 1.44
CIRBP-227ENST00000590188 FCHSD2O94868 740 aa24.03■■□□□ 1.44
CIRBP-227ENST00000590188 TEFQ10587 303 aa24.03■■□□□ 1.44
CIRBP-227ENST00000590188 RALBP1Q15311 655 aa24.03■■□□□ 1.44
CIRBP-227ENST00000590188 TJP1Q07157 1748 aa24.03■■□□□ 1.44
CIRBP-227ENST00000590188 DNAJC10Q8IXB1 793 aa24.02■■□□□ 1.44
CIRBP-227ENST00000590188 CNTNAP4Q9C0A0 1308 aa24.02■■□□□ 1.44
CIRBP-227ENST00000590188 DCAF8L1A6NGE4 600 aa24.01■■□□□ 1.43
CIRBP-227ENST00000590188 CRKLP46109 303 aaKnown RBP24.01■■□□□ 1.43
CIRBP-227ENST00000590188 TRAPPC3LQ5T215 181 aa24■■□□□ 1.43
CIRBP-227ENST00000590188 RC3H1Q5TC82 1133 aaKnown RBP24■■□□□ 1.43
CIRBP-227ENST00000590188 KCPQ6ZWJ8 1503 aa24■■□□□ 1.43
CIRBP-227ENST00000590188 MCM10Q7L590 875 aa23.99■■□□□ 1.43
CIRBP-227ENST00000590188 TTC5Q8N0Z6 440 aa23.99■■□□□ 1.43
CIRBP-227ENST00000590188 RPS6KA4O75676 772 aa23.98■■□□□ 1.43
CIRBP-227ENST00000590188 DCTN1Q14203 1278 aa23.98■■□□□ 1.43
CIRBP-227ENST00000590188 NLGN2Q8NFZ4 835 aa23.98■■□□□ 1.43
CIRBP-227ENST00000590188 RTF1Q92541 710 aaKnown RBP23.98■■□□□ 1.43
CIRBP-227ENST00000590188 ARHGEF1Q92888 912 aaKnown RBP23.98■■□□□ 1.43
CIRBP-227ENST00000590188 MYH14Q7Z406 1995 aaKnown RBP23.98■■□□□ 1.43
CIRBP-227ENST00000590188 MYBBP1AQ9BQG0 1328 aaKnown RBP23.97■■□□□ 1.43
CIRBP-227ENST00000590188 NEFMP07197 916 aa23.96■■□□□ 1.43
CIRBP-227ENST00000590188 CEMIPQ8WUJ3 1361 aa23.95■■□□□ 1.42
CIRBP-227ENST00000590188 RFC4P35249 363 aa23.95■■□□□ 1.42
CIRBP-227ENST00000590188 PELP1Q8IZL8 1130 aaKnown RBP23.95■■□□□ 1.42
CIRBP-227ENST00000590188 SIPA1L3O60292 1781 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-227ENST00000590188 INTS5Q6P9B9 1019 aaKnown RBP23.94■■□□□ 1.42
CIRBP-227ENST00000590188 CCDC87Q9NVE4 849 aa23.94■■□□□ 1.42
CIRBP-227ENST00000590188 CICQ96RK0 1608 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-227ENST00000590188 BTBD11A6QL63 1104 aa23.93■■□□□ 1.42
CIRBP-227ENST00000590188 KCNQ3O43525 872 aa23.93■■□□□ 1.42
CIRBP-227ENST00000590188 CYP19A1P11511 503 aaPredicted RBP23.93■■□□□ 1.42
CIRBP-227ENST00000590188 ADRA2BP18089 450 aa23.93■■□□□ 1.42
CIRBP-227ENST00000590188 ZNF790Q6PG37 636 aa23.93■■□□□ 1.42
CIRBP-227ENST00000590188 ZNF496Q96IT1 587 aaPredicted RBP23.93■■□□□ 1.42
CIRBP-227ENST00000590188 SRP68Q9UHB9 627 aaKnown RBP23.93■■□□□ 1.42
CIRBP-227ENST00000590188 UBR2Q8IWV8 1755 aa23.93■■□□□ 1.42
CIRBP-227ENST00000590188 PLEKHF1Q96S99 279 aa23.92■■□□□ 1.42
CIRBP-227ENST00000590188 MAPK8IP3Q9UPT6 1336 aa23.91■■□□□ 1.42
CIRBP-227ENST00000590188 C4AP0C0L4 1744 aa23.91■■□□□ 1.42
CIRBP-227ENST00000590188 MMP10P09238 476 aa23.91■■□□□ 1.42
CIRBP-227ENST00000590188 ZBTB1Q9Y2K1 713 aa23.91■■□□□ 1.42
CIRBP-227ENST00000590188 GYS1P13807 737 aa23.9■■□□□ 1.42
CIRBP-227ENST00000590188 GPR162Q16538 588 aa23.9■■□□□ 1.42
CIRBP-227ENST00000590188 VSIG10Q8N0Z9 540 aa23.9■■□□□ 1.42
CIRBP-227ENST00000590188 CANXP27824 592 aaKnown RBP23.89■■□□□ 1.41
CIRBP-227ENST00000590188 HEG1Q9ULI3 1381 aa23.89■■□□□ 1.41
CIRBP-227ENST00000590188 FMNL2Q96PY5 1086 aa23.88■■□□□ 1.41
CIRBP-227ENST00000590188 PRKRIP1Q9H875 184 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-227ENST00000590188 SOS1Q07889 1333 aaPredicted RBP23.87■■□□□ 1.41
CIRBP-227ENST00000590188 NFE2L2Q16236 605 aa23.87■■□□□ 1.41
CIRBP-227ENST00000590188 NLGN1Q8N2Q7 840 aa23.87■■□□□ 1.41
CIRBP-227ENST00000590188 WWC3Q9ULE0 1092 aa23.87■■□□□ 1.41
CIRBP-227ENST00000590188 HTATSF1O43719 755 aaKnown RBP23.86■■□□□ 1.41
CIRBP-227ENST00000590188 THUMPD2Q9BTF0 503 aaKnown RBP23.86■■□□□ 1.41
CIRBP-227ENST00000590188 PNNQ9H307 717 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms